Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 2.2e-132 475.7 248 100.0
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.1e-120 436.8 248 91.5
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 2.9e-60 236.1 245 55.5
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 6.0e-58 228.4 222 57.7
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.7e-57 226.9 228 57.0
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.7e-57 226.9 228 57.0
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 3.9e-57 225.7 222 58.1
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.9e-57 225.7 222 58.1
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.9e-57 225.7 222 58.1
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 1.5e-56 223.8 241 58.1
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 1.9e-56 223.4 222 57.2
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 1.6e-55 220.3 226 57.5
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 2.1e-55 219.9 222 56.8
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 3.6e-55 219.2 226 57.1
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 3.6e-55 219.2 226 57.1
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 1.8e-54 216.9 224 56.7
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 2.4e-54 216.5 242 53.7
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 2.4e-54 216.5 242 53.7
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 3.1e-54 216.1 230 57.0
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 5.3e-54 215.3 237 54.9
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 5.3e-54 215.3 221 56.1
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 9.0e-54 214.5 221 56.1
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 2.6e-53 213.0 229 55.0
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 4.4e-53 212.2 237 53.2
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 1.7e-52 210.3 216 57.4
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 1.7e-52 210.3 221 57.0
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 3.8e-52 209.1 226 54.9
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 6.4e-52 208.4 231 53.2
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 6.4e-52 208.4 238 53.4
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 6.4e-52 208.4 224 55.4
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 1.1e-51 207.6 243 52.7
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 2.4e-51 206.5 223 55.2
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.4e-51 206.5 226 54.4
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 2.4e-51 206.5 223 53.4
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 2.4e-51 206.5 241 54.4
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 5.4e-51 205.3 216 55.6
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 9.3e-51 204.5 225 55.6
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 2.1e-50 203.4 225 52.9
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 2.1e-50 203.4 230 53.5
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 2.7e-50 203.0 224 54.9
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 2.7e-50 203.0 230 53.0
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 3.5e-50 202.6 242 52.1
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 4.6e-50 202.2 225 52.4
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 6.0e-50 201.8 238 52.5
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 6.0e-50 201.8 282 47.9
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 7.8e-50 201.4 232 53.0
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 7.8e-50 201.4 226 53.5
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.7e-49 200.3 242 52.9
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 2.3e-49 199.9 230 53.0
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 2.3e-49 199.9 233 55.8
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 3.0e-49 199.5 224 53.1
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 3.9e-49 199.1 230 52.6
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 3.9e-49 199.1 226 52.7
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 5.1e-49 198.7 240 49.6
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 1.1e-48 197.6 232 51.7
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 2.5e-48 196.4 255 49.8
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 4.3e-48 195.7 223 53.8
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 9.6e-48 194.5 233 51.9
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 1.3e-47 194.1 247 51.0
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 2.1e-47 193.4 247 51.0
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 3.6e-47 192.6 240 48.8
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.4e-46 189.9 235 49.8
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 3.1e-46 189.5 235 50.6
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 3.1e-46 189.5 251 46.6
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 1.2e-45 187.6 211 51.7
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 2.0e-45 186.8 228 50.9
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 4.5e-45 185.7 224 53.1
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 4.5e-45 185.7 223 51.6
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 1.7e-44 183.7 239 48.1
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 6.4e-44 181.8 224 52.7
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 8.4e-44 181.4 261 45.6
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.1e-43 181.0 222 52.7
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 1.4e-43 180.6 204 52.9
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 1.9e-43 180.3 184 57.1
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 3.2e-43 179.5 181 57.5
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 4.2e-43 179.1 230 49.6
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 4.2e-43 179.1 204 53.9
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 5.4e-43 178.7 222 50.0
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 7.1e-43 178.3 228 49.1
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 9.3e-43 177.9 234 48.3
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 3.5e-42 176.0 232 48.3
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 1.0e-41 174.5 227 48.5
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 6.7e-41 171.8 237 48.5
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 1.1e-40 171.0 244 48.8
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 3.3e-40 169.5 240 49.6
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 4.3e-40 169.1 183 55.7
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 5.6e-40 168.7 233 48.9
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 3.7e-39 166.0 218 48.2
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 1.1e-38 164.5 218 47.7
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 1.4e-38 164.1 190 54.7
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.8e-38 163.7 215 49.3
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 4.0e-38 162.5 235 45.5
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 4.0e-38 162.5 235 45.5
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 4.0e-38 162.5 235 45.5
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 6.9e-38 161.8 241 44.4
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 6.9e-38 161.8 229 46.3
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 9.0e-38 161.4 200 50.0
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 1.2e-37 161.0 232 44.4
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 3.4e-37 159.5 227 47.1
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 1.7e-36 157.1 250 44.8
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 2.2e-36 156.8 200 49.5
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 3.8e-36 156.0 210 49.0
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.2e-34 151.0 207 47.3
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.0e-33 147.9 207 46.9
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.9e-32 143.7 214 46.7
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 9.6e-32 141.4 202 46.0
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 2.4e-30 136.7 207 44.0
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.0e-28 131.3 187 46.5
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 3.8e-28 129.4 379 31.4
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 1.9e-27 127.1 191 44.5
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 1.0e-25 121.3 270 38.1
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 1.1e-24 117.9 179 44.7
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 1.9e-24 117.1 157 50.3
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.1e-22 111.3 168 44.6
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 2.9e-20 103.2 170 42.9
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 1.9e-19 100.5 222 35.1
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 7.9e-18 95.1 56 78.6
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.4e-17 94.4 220 37.3
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 6.7e-17 92.0 209 38.8
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 2.0e-16 90.5 202 37.6
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 3.1e-14 83.2 137 42.3
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 9.1e-14 81.6 117 46.2
Oeu047380.1 Olea europaea HOM05D006128 ORTHO05D007466 1.0e-12 78.2 62 61.3
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 2.9e-12 76.6 45 75.6
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 6.5e-12 75.5 170 38.8
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 3.2e-11 73.2 92 46.7
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 2.3e-09 67.0 129 39.5
CBR_g33995 Chara braunii HOM05D006128 ORTHO05D007466 3.1e-06 56.6 105 34.3


User provided reference genes

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