Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 9.9e-305 1049.3 521 100.0
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 4.5e-132 475.7 680 41.3
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 7.2e-130 468.4 675 41.3
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 6.8e-128 461.8 672 41.5
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.3e-126 457.6 679 40.2
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 1.5e-122 444.1 674 40.1
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 7.2e-122 441.8 673 37.7
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 8.9e-120 434.9 652 39.3
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.6e-119 433.3 663 39.2
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 4.9e-118 429.1 662 38.5
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 6.3e-118 428.7 674 39.2
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 9.2e-117 424.9 629 39.7
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 2.3e-115 420.2 669 39.3
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 3.9e-115 419.5 675 37.5
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 8.6e-115 418.3 665 36.7
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 8.6e-115 418.3 662 39.3
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 1.9e-114 417.2 665 38.5
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 1.2e-113 414.5 573 41.9
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 8.0e-113 411.8 674 36.6
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.0e-112 411.4 652 39.0
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 3.1e-112 409.8 676 37.1
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 2.6e-111 406.8 668 38.2
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 7.5e-111 405.2 662 38.4
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 2.9e-110 403.3 634 37.5
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 8.3e-110 401.7 723 36.2
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 2.4e-109 400.2 661 37.1
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 6.0e-108 395.6 676 36.5
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.3e-107 393.7 653 37.5
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.5e-106 391.0 691 36.5
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 5.6e-106 389.0 683 34.8
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 7.3e-106 388.7 691 35.7
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 7.3e-106 388.7 662 36.7
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 9.5e-106 388.3 668 37.3
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 4.7e-105 386.0 645 36.7
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 1.1e-104 384.8 664 36.1
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 4.0e-104 382.9 650 36.9
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 4.0e-104 382.9 664 36.6
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 3.4e-103 379.8 650 36.6
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 3.4e-103 379.8 662 36.1
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 7.5e-103 378.6 659 35.4
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 9.8e-103 378.3 661 36.5
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 3.7e-102 376.3 650 36.8
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 1.9e-101 374.0 650 36.2
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 2.4e-101 373.6 675 36.1
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 3.2e-101 373.2 665 35.0
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 7.1e-101 372.1 660 37.9
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.6e-100 370.9 677 35.3
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 4.6e-100 369.4 667 35.2
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 1.0e-99 368.2 662 35.6
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 1.7e-99 367.5 672 34.8
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 3.0e-99 366.7 658 36.0
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 5.1e-99 365.9 658 36.2
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 1.1e-98 364.8 671 35.6
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.1e-98 364.8 694 34.9
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 1.1e-98 364.8 668 34.7
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 2.5e-98 363.6 665 34.1
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 7.3e-98 362.1 670 35.5
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 1.2e-97 361.3 669 34.1
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 2.1e-97 360.5 670 34.3
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.1e-96 358.2 658 34.7
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 1.8e-96 357.5 672 34.1
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 2.6e-95 353.6 658 33.1
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 2.6e-95 353.6 671 34.4
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 9.9e-95 351.7 681 33.3
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 4.1e-93 346.3 598 36.1
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 5.4e-93 345.9 672 32.6
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 5.4e-93 345.9 665 34.9
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 1.2e-92 344.7 658 33.7
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 2.1e-92 344.0 669 35.1
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 3.0e-91 340.1 659 34.9
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 5.1e-91 339.3 644 34.9
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 8.6e-91 338.6 576 37.0
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 5.2e-88 329.3 650 33.1
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 6.8e-88 328.9 565 36.5
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 8.9e-88 328.6 662 33.5
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 1.6e-84 317.8 482 38.2
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 1.3e-83 314.7 473 39.5
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 2.3e-83 313.9 543 36.5
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 1.1e-74 285.0 634 31.5
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 1.1e-72 278.5 474 35.9
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 1.1e-66 258.5 392 37.0
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 5.6e-66 256.1 316 44.3
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.6e-65 254.6 318 42.8
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 1.4e-64 251.5 325 43.7
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 1.2e-63 248.4 317 44.8
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.6e-63 247.3 208 58.2
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 5.8e-63 246.1 526 32.1
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 1.6e-60 238.0 543 30.8
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 1.5e-55 221.5 453 32.7
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 5.0e-54 216.5 548 28.5
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.3e-51 208.4 255 43.5
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 1.8e-51 208.0 656 28.2
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 5.1e-51 206.5 464 30.4
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 1.1e-50 205.3 656 28.2
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 1.5e-50 204.9 495 27.3
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.7e-46 191.4 254 39.8
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 2.5e-45 187.6 251 43.4
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 5.5e-45 186.4 175 53.1
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.8e-43 181.4 687 23.9
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 1.5e-42 178.3 728 23.6
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 9.7e-42 175.6 579 26.9
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 5.3e-40 169.9 267 37.1
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.8e-35 154.8 137 54.0
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 2.3e-35 154.5 154 54.5
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 6.7e-35 152.9 684 21.6
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 4.4e-34 150.2 293 32.4
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 4.0e-27 127.1 219 36.1
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 2.8e-25 120.9 250 31.2
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 9.1e-24 115.9 89 58.4
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 5.0e-22 110.2 144 43.1
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.5e-18 98.6 117 47.9
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 3.1e-16 90.9 184 28.3
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 3.5e-15 87.4 65 61.5
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 6.5e-14 83.2 155 34.2
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 9.4e-13 79.3 137 34.3
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 4.0e-11 73.9 97 40.2
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.2e-10 72.4 59 52.5
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 3.7e-09 67.4 76 47.4
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 7.7e-07 59.7 134 32.1


User provided reference genes

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