Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 1.4e-64 249.6 141 100.0
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 5.3e-51 204.5 124 92.7
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.8e-35 152.9 145 66.9
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.1e-35 152.1 130 72.3
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.9e-35 151.0 129 72.9
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 9.0e-35 150.6 130 72.3
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.5e-34 149.8 147 67.3
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.6e-34 149.1 139 68.3
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 4.5e-34 148.3 133 68.4
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 5.9e-34 147.9 139 67.6
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 5.9e-34 147.9 139 67.6
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 1.0e-33 147.1 162 63.6
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 2.2e-33 146.0 135 68.9
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 2.2e-33 146.0 139 68.3
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 2.2e-33 146.0 146 65.8
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 3.8e-33 145.2 141 66.0
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 3.8e-33 145.2 139 67.6
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 6.5e-33 144.4 145 64.8
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 6.5e-33 144.4 144 66.7
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 8.5e-33 144.1 137 66.4
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 8.5e-33 144.1 144 66.7
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.1e-32 143.7 144 66.0
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 1.4e-32 143.3 136 68.4
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 1.9e-32 142.9 133 68.4
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 4.2e-32 141.7 133 69.9
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.6e-31 139.8 131 69.5
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.6e-31 139.8 135 65.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 3.6e-31 138.7 112 75.0
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 4.6e-31 138.3 135 68.1
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 1.3e-30 136.7 142 61.3
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 3.0e-30 135.6 144 65.3
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 3.0e-30 135.6 136 69.9
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 5.1e-30 134.8 136 63.2
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 6.7e-30 134.4 130 66.9
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 6.7e-30 134.4 149 62.4
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 8.7e-30 134.0 130 69.2
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.5e-29 133.3 144 63.2
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 2.5e-29 132.5 150 62.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 2.5e-29 132.5 141 61.7
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 4.3e-29 131.7 137 65.7
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 5.7e-29 131.3 151 59.6
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 5.7e-29 131.3 151 59.6
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 7.4e-29 131.0 131 70.2
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 1.6e-28 129.8 133 63.9
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 1.6e-28 129.8 106 71.7
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 2.8e-28 129.0 131 64.1
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 2.8e-28 129.0 136 61.8
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 3.7e-28 128.6 134 65.7
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 3.7e-28 128.6 133 63.9
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 3.7e-28 128.6 134 65.7
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 4.8e-28 128.3 138 63.0
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 4.8e-28 128.3 138 63.0
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.3e-28 127.9 145 62.1
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.3e-28 127.9 145 62.1
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 6.3e-28 127.9 133 65.4
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 1.8e-27 126.3 136 64.0
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 2.4e-27 125.9 140 61.4
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 2.4e-27 125.9 151 59.6
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 5.3e-27 124.8 131 62.6
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 5.3e-27 124.8 133 63.2
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 5.3e-27 124.8 138 62.3
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 6.9e-27 124.4 136 63.2
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 9.1e-27 124.0 200 50.5
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.2e-26 123.6 138 62.3
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.5e-26 123.2 138 63.0
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 1.5e-26 123.2 136 62.5
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 2.0e-26 122.9 136 62.5
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.0e-26 122.9 139 61.9
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.0e-26 122.9 139 61.9
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 2.6e-26 122.5 135 63.0
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 3.4e-26 122.1 138 60.1
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 3.4e-26 122.1 130 63.1
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 4.5e-26 121.7 142 59.9
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 4.5e-26 121.7 145 60.7
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 7.7e-26 120.9 140 58.6
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 1.0e-25 120.6 139 61.9
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.3e-25 120.2 141 58.2
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 2.2e-25 119.4 147 57.8
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 2.9e-25 119.0 131 63.4
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 3.8e-25 118.6 135 62.2
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 3.8e-25 118.6 135 62.2
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 3.8e-25 118.6 135 62.2
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 2.5e-24 115.9 163 49.7
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.2e-24 115.2 119 68.1
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 4.2e-24 115.2 170 50.0
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 7.2e-24 114.4 144 61.1
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 1.2e-23 113.6 137 56.9
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 1.6e-23 113.2 138 58.0
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 2.1e-23 112.8 137 59.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 4.6e-23 111.7 144 55.6
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 7.9e-23 110.9 134 57.5
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.9e-23 110.9 141 56.7
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 1.0e-22 110.5 74 83.8
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.0e-22 110.5 141 58.2
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 3.9e-22 108.6 138 54.3
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 3.9e-22 108.6 138 58.7
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 5.1e-22 108.2 137 59.1
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 1.5e-21 106.7 127 59.8
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.5e-21 106.7 139 56.8
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 2.0e-21 106.3 159 55.3
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 2.0e-21 106.3 86 73.3
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 3.3e-21 105.5 138 55.8
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 4.4e-21 105.1 139 54.7
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 7.4e-21 104.4 136 55.9
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.7e-20 103.2 142 55.6
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 4.1e-19 98.6 66 81.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 4.1e-19 98.6 70 80.0
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 6.9e-19 97.8 90 67.8
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 9.1e-19 97.4 95 64.2
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 9.1e-19 97.4 95 64.2
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.2e-18 97.1 142 52.1
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 1.5e-18 96.7 133 55.6
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 5.9e-18 94.7 132 53.0
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 5.9e-18 94.7 86 68.6
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.3e-17 93.6 133 53.4
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.3e-17 93.6 137 54.7
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 3.8e-17 92.0 105 61.0
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.1e-16 90.5 146 49.3
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 9.4e-16 87.4 102 59.8
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 1.8e-14 83.2 115 53.0
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 5.7e-13 78.2 71 67.6
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.8e-11 73.2 132 48.5
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 4.1e-11 72.0 85 56.5
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 3.5e-10 68.9 118 46.6
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 1.3e-09 67.0 138 45.7
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 3.8e-09 65.5 112 50.0
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 7.2e-08 61.2 133 42.9
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 2.3e-06 56.2 46 69.6


User provided reference genes

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