Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1426 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 2.3e-114 415.6 219 100.0
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 7.0e-26 121.7 225 37.8
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 7.7e-25 118.2 228 37.3
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 3.8e-24 115.9 225 36.4
MBI06_g34539_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 4.7e-22 109.0 223 36.8
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 8.0e-22 108.2 214 35.5
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 2.3e-21 106.7 219 34.7
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 4.0e-21 105.9 219 33.8
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 2.0e-20 103.6 122 47.5
Aqoxy3G04171 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.6e-20 103.2 189 37.6
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 4.4e-20 102.4 219 34.7
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 9.8e-20 101.3 218 32.1
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.7e-19 100.5 214 34.1
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 1.7e-19 100.5 219 32.9
COL.COLO4_11998 Corchorus olitorius HOM05D003707 ORTHO05D004309 1.1e-18 97.8 125 44.0
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 1.8e-18 97.1 208 33.2
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 3.1e-18 96.3 219 32.9
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 3.1e-18 96.3 215 33.0
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 4.1e-18 95.9 233 33.9
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 5.4e-18 95.5 219 32.9
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 9.1e-18 94.7 218 33.0
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 1.6e-17 94.0 214 29.9
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 1.6e-17 94.0 117 47.0
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 2.7e-17 93.2 122 41.8
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 2.7e-17 93.2 111 45.9
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 3.5e-17 92.8 122 41.8
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 5.9e-17 92.0 219 32.0
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 5.9e-17 92.0 121 41.3
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 7.7e-17 91.7 219 32.0
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 1.0e-16 91.3 214 29.0
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 1.3e-16 90.9 219 32.4
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.3e-16 90.9 217 34.1
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 2.2e-16 90.1 122 43.4
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 3.8e-16 89.4 120 40.0
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 5.0e-16 89.0 121 40.5
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 8.5e-16 88.2 114 45.6
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 8.5e-16 88.2 214 28.0
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 8.5e-16 88.2 121 42.1
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 1.1e-15 87.8 214 35.0
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 1.1e-15 87.8 214 28.0
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 1.5e-15 87.4 208 29.3
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 1.9e-15 87.0 214 29.0
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 1.9e-15 87.0 214 28.0
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 2.5e-15 86.7 215 34.0
Nn4g24800 Nelumbo nucifera HOM05D003707 ORTHO05D004309 4.2e-15 85.9 231 29.0
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 5.5e-15 85.5 195 30.8
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 7.2e-15 85.1 214 31.3
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 7.2e-15 85.1 208 29.8
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 7.2e-15 85.1 210 33.3
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 7.2e-15 85.1 205 30.2
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 9.5e-15 84.7 211 32.7
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 1.2e-14 84.3 211 30.8
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 1.6e-14 84.0 208 32.7
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 2.1e-14 83.6 109 44.0
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 2.8e-14 83.2 215 33.5
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 2.8e-14 83.2 216 33.3
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 3.6e-14 82.8 215 35.3
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 3.6e-14 82.8 219 29.2
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 3.6e-14 82.8 111 45.0
Oeu029730.1 Olea europaea HOM05D003707 ORTHO05D004309 3.6e-14 82.8 111 41.4
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 4.7e-14 82.4 117 39.3
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 4.7e-14 82.4 214 28.0
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 6.1e-14 82.0 201 31.3
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 6.1e-14 82.0 214 31.3
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 8.0e-14 81.6 215 32.1
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 8.0e-14 81.6 219 32.9
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 1.0e-13 81.3 208 31.2
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 1.4e-13 80.9 111 43.2
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 1.4e-13 80.9 108 39.8
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 1.8e-13 80.5 214 31.8
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 1.8e-13 80.5 159 35.8
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 2.3e-13 80.1 111 41.4
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 2.3e-13 80.1 208 30.8
Sc23g0000420 Simmondsia chinensis HOM05D003707 ORTHO05D004309 4.0e-13 79.3 113 38.9
AUR62027820 Chenopodium quinoa HOM05D003707 ORTHO05D004309 5.2e-13 79.0 125 33.6
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 5.2e-13 79.0 215 31.2
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 6.8e-13 78.6 215 30.7
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 6.8e-13 78.6 218 30.7
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 1.2e-12 77.8 214 31.8
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 1.5e-12 77.4 204 28.4
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 2.6e-12 76.6 113 39.8
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 2.6e-12 76.6 214 29.0
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 2.6e-12 76.6 108 38.9
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 3.4e-12 76.3 122 41.0
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 4.4e-12 75.9 99 41.4
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 7.5e-12 75.1 218 30.7
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 7.5e-12 75.1 126 38.1
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 7.5e-12 75.1 112 41.1
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 7.5e-12 75.1 112 41.1
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 7.5e-12 75.1 121 37.2
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 1.3e-11 74.3 211 31.8
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 1.3e-11 74.3 223 32.3
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 2.8e-11 73.2 99 41.4
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.8e-11 73.2 117 39.3
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 2.8e-11 73.2 108 39.8
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 3.7e-11 72.8 118 40.7
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 3.7e-11 72.8 215 30.7
AUR62018979 Chenopodium quinoa HOM05D003707 ORTHO05D004309 4.9e-11 72.4 123 32.5
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 4.9e-11 72.4 117 39.3
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 4.9e-11 72.4 117 39.3
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 4.9e-11 72.4 102 39.2
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 6.3e-11 72.0 124 41.9
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 8.3e-11 71.6 217 28.1
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 1.4e-10 70.9 117 38.5
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 1.4e-10 70.9 211 30.3
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 1.8e-10 70.5 214 27.1
Actinidia33120 Actinidia chinensis HOM05D003707 ORTHO05D004309 2.4e-10 70.1 137 34.3
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 2.4e-10 70.1 99 41.4
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 2.4e-10 70.1 211 28.9
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.2e-09 67.8 211 28.9
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 3.5e-09 66.2 106 38.7
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 1.3e-08 64.3 105 36.2
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 1.3e-08 64.3 108 34.3
Hma1.2p1_0526F.1_g172810 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 1.7e-08 63.9 121 33.9
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 1.5e-07 60.8 125 33.6
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 1.9e-07 60.5 114 33.3
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 2.5e-07 60.1 105 36.2
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 2.5e-07 60.1 105 36.2
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 2.5e-07 60.1 105 36.2
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 3.3e-07 59.7 204 25.0
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 4.3e-07 59.3 105 35.2
ATR0618G286 Amborella trichopoda HOM05D003707 ORTHO05D004309 5.6e-07 58.9 201 25.4
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 5.6e-07 58.9 118 34.7
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 7.3e-07 58.5 118 33.9
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 9.5e-07 58.2 125 32.0
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 1.6e-06 57.4 106 34.0
HPP92_025845 Vanilla planifolia HOM05D003707 ORTHO05D004309 1.6e-06 57.4 54 57.4
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 2.1e-06 57.0 106 32.1
Duzib116G0740 Durio zibethinus HOM05D003707 ORTHO05D004309 2.1e-06 57.0 64 48.4
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 4.7e-06 55.8 121 34.7


User provided reference genes

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