Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1414 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 9.1e-133 476.9 234 100.0
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 3.2e-61 239.2 427 37.9
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 4.6e-60 235.3 429 37.1
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 7.9e-60 234.6 428 37.4
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 1.3e-59 233.8 420 37.4
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 1.8e-59 233.4 429 36.4
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 1.8e-59 233.4 395 38.5
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 3.0e-59 232.6 428 37.1
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 3.9e-59 232.3 429 37.1
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 5.1e-59 231.9 436 36.0
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 6.7e-59 231.5 428 37.1
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 3.3e-58 229.2 400 38.8
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 5.7e-58 228.4 428 36.9
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 1.3e-57 227.3 429 36.8
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 1.1e-56 224.2 428 36.9
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 1.8e-56 223.4 428 36.0
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 2.4e-56 223.0 411 36.7
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 3.1e-56 222.6 428 36.0
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 5.3e-56 221.9 427 36.8
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 6.9e-56 221.5 428 36.2
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 9.0e-56 221.1 426 35.7
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 1.2e-55 220.7 426 36.9
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 1.2e-55 220.7 437 35.7
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 2.0e-55 219.9 420 36.0
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 2.0e-55 219.9 428 35.7
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 2.6e-55 219.5 428 35.5
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 3.4e-55 219.2 420 36.0
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 4.5e-55 218.8 428 36.0
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 1.0e-54 217.6 427 36.3
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.0e-54 217.6 429 35.2
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 1.3e-54 217.2 428 36.0
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 1.3e-54 217.2 429 35.2
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 2.2e-54 216.5 429 35.4
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 2.9e-54 216.1 428 35.0
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 2.9e-54 216.1 428 35.7
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 3.8e-54 215.7 417 36.0
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 5.0e-54 215.3 416 35.3
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 8.5e-54 214.5 428 35.0
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 8.5e-54 214.5 429 35.7
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 8.5e-54 214.5 428 36.0
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 1.1e-53 214.2 432 35.4
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 2.5e-53 213.0 428 35.5
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 2.5e-53 213.0 410 37.8
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 3.2e-53 212.6 426 35.9
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.2e-53 212.2 429 35.0
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.2e-53 212.2 442 34.4
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 5.5e-53 211.8 454 34.8
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 7.2e-53 211.5 431 35.0
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 1.2e-52 210.7 389 37.0
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 2.7e-52 209.5 419 36.8
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 2.7e-52 209.5 426 35.9
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 2.7e-52 209.5 428 36.0
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 3.6e-52 209.1 429 36.1
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 3.6e-52 209.1 427 34.9
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 6.1e-52 208.4 443 34.5
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 7.9e-52 208.0 427 34.2
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 1.0e-51 207.6 426 35.7
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 1.3e-51 207.2 428 35.7
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 1.3e-51 207.2 426 35.2
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 1.3e-51 207.2 428 35.3
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 1.3e-51 207.2 431 34.8
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 3.0e-51 206.1 424 35.6
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 3.9e-51 205.7 429 36.1
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 5.1e-51 205.3 411 35.0
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 6.7e-51 204.9 404 36.1
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 6.7e-51 204.9 428 33.9
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 1.1e-50 204.1 422 35.8
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 1.9e-50 203.4 467 33.0
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 3.3e-50 202.6 411 34.8
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 5.7e-50 201.8 420 35.2
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 5.7e-50 201.8 450 34.0
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 1.3e-49 200.7 432 35.2
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 2.8e-49 199.5 423 35.5
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 8.2e-49 198.0 422 34.6
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 8.2e-49 198.0 422 34.6
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 6.9e-48 194.9 415 35.2
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 6.9e-48 194.9 419 33.2
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 4.5e-47 192.2 415 34.9
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 5.9e-47 191.8 416 33.7
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 7.7e-47 191.4 415 34.0
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 1.3e-46 190.7 415 34.0
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 2.5e-45 186.4 399 33.3
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 7.2e-45 184.9 463 31.5
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 2.1e-44 183.3 398 33.9
MBI01_g29840_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 6.1e-44 181.8 424 35.6
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 3.0e-43 179.5 393 34.6
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 8.8e-43 177.9 405 34.1
Dinv36669 Davidia involucrata HOM05D005048 ORTHO05D006420 2.2e-41 173.3 204 49.0
Dinv41630 Davidia involucrata HOM05D005048 ORTHO05D006420 2.2e-41 173.3 204 50.5
MBI01_g28841_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 6.3e-41 171.8 190 55.8
Solyc01g102490.3 Solanum lycopersicum HOM05D005048 ORTHO05D006420 8.2e-41 171.4 204 49.0
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 1.1e-40 171.0 402 32.8
Phvul.002G311600 Phaseolus vulgaris HOM05D005048 ORTHO05D006420 1.8e-40 170.2 214 47.2
CDE05G1289 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 4.1e-40 169.1 89 92.1
Sed0003567 Sechium edule HOM05D005048 ORTHO05D006420 4.5e-39 165.6 204 47.5
AT4G32360 Arabidopsis thaliana HOM05D005048 ORTHO05D006420 7.7e-39 164.9 204 48.0
Sc08g0007680 Simmondsia chinensis HOM05D005048 ORTHO05D006420 1.0e-38 164.5 204 48.0
Manes.14G158111 Manihot esculenta HOM05D005048 ORTHO05D006420 2.2e-38 163.3 199 48.2
DCAR_009632 Daucus carota HOM05D005048 ORTHO05D006420 3.8e-38 162.5 199 48.7
MBI01_g38807_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 5.5e-37 158.7 298 36.9
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 3.6e-36 156.0 370 33.0
SHI02718 Sapria himalayana HOM05D005048 ORTHO05D006420 7.4e-34 148.3 202 43.6
Atru.chr7.1383 Acer truncatum HOM05D005048 ORTHO05D006420 9.7e-34 147.9 300 34.3
SEGI_35536 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 9.7e-34 147.9 187 45.5
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 2.2e-33 146.7 298 35.6
Lj7C657T3 Lonicera japonica HOM05D005048 ORTHO05D006420 4.8e-33 145.6 198 43.9
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis HOM05D005048 ORTHO05D006420 1.4e-32 144.1 195 44.1
MD15G1191600 Malus domestica HOM05D005048 ORTHO05D006420 3.5e-31 139.4 298 34.6
PSO210G5559 Papaver somniferum HOM05D005048 ORTHO05D006420 1.3e-30 137.5 298 34.9
CARHR240270 Cardamine hirsuta HOM05D005048 ORTHO05D006420 3.8e-30 136.0 171 48.0
FAN26G3268 Fragaria x ananassa HOM05D005048 ORTHO05D006420 3.2e-29 132.9 171 44.4
MCO04G387 Micromonas commoda HOM05D005048 ORTHO05D006420 5.5e-29 132.1 420 27.6
CSS0046369 Camellia sinensis var. sinensis HOM05D005048 ORTHO05D006420 7.2e-29 131.7 296 32.4
FvH4_1g05561 Fragaria vesca HOM05D005048 ORTHO05D006420 3.6e-28 129.4 221 38.5
FAN26G2936 Fragaria x ananassa HOM05D005048 ORTHO05D006420 2.2e-25 120.2 89 62.9
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 6.3e-25 118.6 426 26.1
MD15G1191500 Malus domestica HOM05D005048 ORTHO05D006420 1.2e-23 114.4 74 74.3
Zm00001eb203390 Zea mays HOM05D005048 ORTHO05D006420 1.2e-23 114.4 162 43.8
Oeu035980.2 Olea europaea HOM05D005048 ORTHO05D006420 7.7e-23 111.7 86 62.8
CDE05G2817 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 8.5e-22 108.2 56 91.1
Glyma.08G036802 Glycine max HOM05D005048 ORTHO05D006420 2.5e-21 106.7 90 58.9
CARHR240280 Cardamine hirsuta HOM05D005048 ORTHO05D006420 7.2e-21 105.1 79 65.8
Cfa027289 Carpinus fangiana HOM05D005048 ORTHO05D006420 1.0e-19 101.3 190 35.8
Duzib150G0221 Durio zibethinus HOM05D005048 ORTHO05D006420 9.8e-18 94.7 92 52.2
Haze_26375 Corylus avellana HOM05D005048 ORTHO05D006420 3.7e-17 92.8 174 36.2
PRCOL_00004495 Prasinoderma coloniale HOM05D005048 ORTHO05D006420 1.8e-16 90.5 121 43.8
SGA_v2.0_scaffold29G12330 Striga asiatica HOM05D005048 ORTHO05D019217 5.4e-16 89.0 69 62.3
Psat7g014800 Pisum sativum HOM05D005048 ORTHO05D006420 4.5e-15 85.9 85 56.5
SEGI_24932 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 1.3e-09 67.8 59 59.3
SHI02717 Sapria himalayana HOM05D005048 ORTHO05D012697 2.4e-08 63.5 49 63.3
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 4.1e-08 62.8 62 53.2
Oeu035977.1 Olea europaea HOM05D005048 ORTHO05D006420 1.6e-07 60.8 89 41.6
AUR62007677 Chenopodium quinoa HOM05D000716 ORTHO05D008300 3.8e-06 56.2 42 59.5
Rhsim02G0216900 Rhododendron simsii HOM05D005048 ORTHO05D006420 5.0e-06 55.8 33 72.7


User provided reference genes

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