Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 9.4e-164 580.1 287 100.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.4e-121 438.3 285 70.9
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 7.5e-121 437.6 285 70.9
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 1.1e-119 433.7 278 71.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 3.2e-119 432.2 286 70.3
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 9.2e-119 430.6 285 69.5
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 3.5e-118 428.7 285 69.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 6.0e-118 427.9 285 69.5
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.9e-117 425.2 282 69.9
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 5.1e-117 424.9 280 69.6
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.3e-116 422.2 285 68.1
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 4.3e-116 421.8 281 67.6
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 9.5e-116 420.6 282 70.2
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.1e-115 419.5 280 68.9
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 2.1e-115 419.5 279 71.0
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.7e-115 418.3 281 66.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 6.2e-115 417.9 281 67.3
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-114 417.2 282 69.1
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.4e-114 416.8 281 67.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 2.3e-114 416.0 285 67.4
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 4.0e-114 415.2 281 67.6
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 4.0e-114 415.2 325 61.5
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 6.8e-114 414.5 281 68.3
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 8.9e-114 414.1 281 67.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 8.9e-114 414.1 285 68.4
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.5e-113 413.3 282 68.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 4.4e-113 411.8 280 68.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 7.5e-113 411.0 272 69.5
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 9.9e-113 410.6 281 65.8
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.3e-112 410.2 281 67.6
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.3e-112 410.2 281 67.3
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.3e-112 410.2 282 65.6
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.7e-112 409.8 281 67.6
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.7e-112 409.8 277 67.9
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.9e-112 409.1 282 67.0
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.9e-112 409.1 282 66.3
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 3.7e-112 408.7 281 67.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 3.7e-112 408.7 282 67.0
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.9e-112 408.3 281 67.6
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 6.4e-112 407.9 277 67.5
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.1e-111 407.1 280 67.5
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.4e-111 406.8 288 66.3
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.4e-111 406.0 278 65.8
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-111 406.0 285 67.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.4e-111 406.0 285 67.0
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 3.2e-111 405.6 281 66.5
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.2e-111 405.6 309 62.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 4.1e-111 405.2 285 64.6
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.4e-111 404.8 289 66.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 5.4e-111 404.8 276 67.0
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 5.4e-111 404.8 285 66.7
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 7.1e-111 404.4 285 64.2
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.2e-111 404.1 285 66.7
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 9.2e-111 404.1 282 67.0
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.2e-110 403.7 285 65.6
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.6e-110 403.3 285 64.9
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.6e-110 403.3 268 69.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 2.7e-110 402.5 291 64.3
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 3.5e-110 402.1 279 65.9
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 3.5e-110 402.1 279 65.9
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 3.5e-110 402.1 283 65.7
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 6.0e-110 401.4 285 64.2
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 7.8e-110 401.0 278 65.8
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 1.0e-109 400.6 271 68.6
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.0e-109 400.6 277 64.6
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.3e-109 400.2 282 66.7
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-109 400.2 285 66.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.7e-109 399.8 270 68.1
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 3.0e-109 399.1 281 65.5
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 8.6e-109 397.5 282 64.2
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.9e-108 396.4 286 63.6
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 4.3e-108 395.2 285 63.2
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 5.6e-108 394.8 286 64.3
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.6e-108 394.8 286 64.3
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 7.3e-108 394.4 285 62.5
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 7.3e-108 394.4 286 63.6
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.6e-107 393.3 268 64.9
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.6e-107 392.1 285 61.8
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 4.7e-107 391.7 280 64.3
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 8.1e-107 391.0 286 62.2
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.2e-105 387.1 285 61.4
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.0e-105 386.3 266 67.3
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.4e-105 385.2 283 61.5
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 4.4e-105 385.2 261 67.4
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 4.4e-105 385.2 283 62.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.7e-104 383.3 285 61.8
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 3.8e-104 382.1 285 61.4
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.4e-103 380.2 283 61.1
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.9e-103 379.8 270 63.3
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 3.2e-103 379.0 283 62.5
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 3.6e-99 365.5 284 59.2
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.1e-98 364.0 262 64.1
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.6e-97 359.4 246 65.9
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 3.9e-93 345.5 239 67.8
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 3.9e-93 345.5 249 63.9
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.1e-93 345.1 268 58.6
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.8e-91 338.6 268 59.3
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.4e-82 310.5 211 67.3
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.0e-81 306.6 271 55.7
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 5.3e-74 282.0 259 49.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.7e-70 269.6 266 48.5
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.5e-70 269.2 172 71.5
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.3e-67 260.8 253 48.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.7e-65 251.5 258 46.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 3.2e-47 193.0 253 41.1
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.8e-45 187.2 151 58.9
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.2e-40 170.2 107 72.0
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.2e-36 157.9 108 67.6
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 2.0e-36 157.1 105 64.8
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.4e-34 150.2 304 36.2
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.8e-32 142.9 95 67.4
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 5.5e-31 139.0 158 50.0
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.2e-28 131.3 88 68.2
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.6e-28 130.2 95 62.1
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-23 114.8 75 69.3
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.0e-20 104.0 67 71.6
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 5.7e-20 102.4 66 71.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 3.3e-07 60.1 41 58.5
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.3e-07 59.7 52 61.5


User provided reference genes

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