Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 3.5e-82 308.1 146 100.0
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 5.1e-73 277.7 139 94.2
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.1e-59 230.7 143 69.9
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.2e-58 229.9 143 69.9
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.3e-57 226.5 143 69.2
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 2.3e-57 225.7 148 70.9
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 3.9e-57 224.9 142 73.2
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 3.9e-57 224.9 136 74.3
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 5.1e-57 224.6 146 69.2
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 6.7e-57 224.2 135 74.1
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 8.7e-57 223.8 130 76.9
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 8.7e-57 223.8 146 69.9
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.1e-56 223.4 142 72.5
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.1e-56 223.4 138 73.9
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 3.3e-56 221.9 137 73.7
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 3.3e-56 221.9 145 69.7
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 3.3e-56 221.9 140 72.1
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 3.3e-56 221.9 146 70.5
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 5.6e-56 221.1 140 70.7
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 5.6e-56 221.1 140 70.7
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 5.6e-56 221.1 139 70.5
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 5.6e-56 221.1 139 70.5
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 7.4e-56 220.7 137 72.3
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 7.4e-56 220.7 139 72.7
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 9.6e-56 220.3 128 74.2
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 1.3e-55 219.9 141 70.2
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.6e-55 219.5 135 71.9
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 2.8e-55 218.8 145 68.3
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 3.7e-55 218.4 141 69.5
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 4.8e-55 218.0 123 77.2
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 4.8e-55 218.0 145 69.0
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 6.2e-55 217.6 146 67.8
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 6.2e-55 217.6 148 68.9
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 6.2e-55 217.6 145 67.6
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 8.1e-55 217.2 137 68.6
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 8.1e-55 217.2 145 66.9
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 8.1e-55 217.2 137 69.3
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.4e-54 216.5 137 71.5
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 1.8e-54 216.1 142 68.3
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 1.8e-54 216.1 142 68.3
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.8e-54 216.1 137 71.5
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 1.8e-54 216.1 145 66.9
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 3.1e-54 215.3 145 66.9
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 4.0e-54 214.9 131 73.3
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.3e-54 214.5 144 67.4
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 5.3e-54 214.5 150 63.3
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 6.9e-54 214.2 134 70.1
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 9.0e-54 213.8 140 68.6
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 9.0e-54 213.8 144 66.7
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 9.0e-54 213.8 134 69.4
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.2e-53 213.4 137 71.5
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 1.2e-53 213.4 146 66.4
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 1.5e-53 213.0 141 66.7
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 1.5e-53 213.0 144 66.7
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 2.0e-53 212.6 145 66.2
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 2.6e-53 212.2 138 71.0
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 2.6e-53 212.2 142 66.9
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 2.6e-53 212.2 145 66.2
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 2.6e-53 212.2 132 75.0
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.6e-53 212.2 139 68.3
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 3.4e-53 211.8 132 69.7
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 3.4e-53 211.8 136 69.1
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 3.4e-53 211.8 146 65.8
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 7.6e-53 210.7 122 75.4
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 7.6e-53 210.7 136 68.4
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 9.9e-53 210.3 144 66.0
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 9.9e-53 210.3 128 75.0
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.7e-52 209.5 123 74.0
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 1.7e-52 209.5 143 67.1
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.7e-52 209.5 134 67.9
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 2.2e-52 209.1 145 64.1
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 2.9e-52 208.8 137 67.2
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 4.9e-52 208.0 137 65.0
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 4.9e-52 208.0 137 66.4
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 4.9e-52 208.0 142 64.1
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.9e-52 208.0 134 67.2
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 8.4e-52 207.2 128 71.1
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 1.1e-51 206.8 138 64.5
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 1.1e-51 206.8 137 66.4
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 1.1e-51 206.8 140 65.7
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.4e-51 206.5 142 62.7
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 1.4e-51 206.5 125 70.4
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.9e-51 206.1 142 63.4
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.9e-51 206.1 142 62.7
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 2.4e-51 205.7 142 63.4
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 3.2e-51 205.3 139 70.5
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 3.2e-51 205.3 139 66.9
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 9.3e-51 203.8 121 71.9
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 1.2e-50 203.4 125 69.6
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.7e-50 202.2 137 65.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 4.6e-50 201.4 125 68.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 6.0e-50 201.1 145 62.1
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 6.0e-50 201.1 142 62.7
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 7.9e-50 200.7 125 68.8
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 7.9e-50 200.7 130 66.9
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 7.9e-50 200.7 130 66.9
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 1.3e-49 199.9 141 64.5
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 3.0e-49 198.7 121 69.4
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.9e-49 198.4 130 66.9
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 6.7e-49 197.6 172 55.8
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 8.7e-49 197.2 141 62.4
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 8.7e-49 197.2 130 70.0
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 2.5e-48 195.7 130 66.2
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.1e-46 190.3 206 48.5
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 1.8e-46 189.5 120 72.5
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 3.1e-46 188.7 157 56.1
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 5.8e-45 184.5 117 71.8
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 2.9e-44 182.2 174 53.4
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 3.8e-44 181.8 130 63.1
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 7.4e-40 167.5 136 61.0
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 1.0e-36 157.1 99 69.7
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 3.2e-35 152.1 93 71.0
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 3.2e-35 152.1 92 70.7
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 3.6e-34 148.7 94 68.1
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 2.3e-33 146.0 94 70.2
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 4.3e-32 141.7 95 67.4
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 8.2e-31 137.5 95 63.2
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 3.2e-19 99.0 111 48.6
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 1.0e-17 94.0 66 72.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-10 70.1 43 65.1
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.7e-10 69.3 35 91.4
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.4e-09 67.0 45 62.2
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 8.8e-09 64.3 53 54.7
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.4e-06 56.2 52 55.8
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 4.1e-06 55.5 32 71.9
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 4.1e-06 55.5 32 71.9


User provided reference genes

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