Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.2e-199 699.5 335 100.0
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 3.1e-94 349.4 210 74.3
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 4.1e-94 349.0 210 75.7
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 7.8e-93 344.7 206 75.2
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.0e-92 344.4 206 75.2
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.1e-91 340.9 252 61.9
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 1.1e-91 340.9 204 75.5
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.5e-91 340.5 205 75.6
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.9e-91 340.1 233 67.0
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 1.9e-91 340.1 206 74.8
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 1.9e-91 340.1 200 75.0
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 1.9e-91 340.1 233 68.2
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.9e-91 340.1 233 68.2
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 1.9e-91 340.1 203 75.9
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 2.5e-91 339.7 208 75.0
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.3e-91 339.3 233 68.2
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 4.3e-91 339.0 217 70.0
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 4.3e-91 339.0 210 72.9
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.3e-91 339.0 233 68.2
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 4.3e-91 339.0 210 73.3
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 5.6e-91 338.6 204 75.0
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 7.3e-91 338.2 210 72.9
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 9.5e-91 337.8 256 62.1
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.2e-90 337.4 208 72.6
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.2e-90 337.4 256 61.7
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.6e-90 337.0 203 74.9
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.1e-90 336.7 214 70.1
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.6e-90 335.9 214 69.6
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 4.7e-90 335.5 232 66.4
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 4.7e-90 335.5 202 74.3
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 4.7e-90 335.5 208 73.6
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 6.1e-90 335.1 202 74.3
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.4e-89 334.0 210 72.4
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 1.4e-89 334.0 198 74.7
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.8e-89 333.6 199 75.9
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 2.3e-89 333.2 199 74.4
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.3e-89 333.2 243 65.4
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 3.0e-89 332.8 200 73.5
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 3.0e-89 332.8 259 61.8
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 4.0e-89 332.4 204 73.5
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 4.0e-89 332.4 200 73.5
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 6.8e-89 331.6 204 72.1
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 8.9e-89 331.3 227 68.7
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 1.5e-88 330.5 329 52.9
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 2.0e-88 330.1 205 74.1
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 4.4e-88 328.9 214 68.7
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 5.7e-88 328.6 204 72.5
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 1.3e-87 327.4 206 71.4
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 1.3e-87 327.4 205 73.7
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.3e-87 327.4 212 70.3
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.7e-87 327.0 212 69.8
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 2.2e-87 326.6 203 71.9
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 2.9e-87 326.2 204 70.1
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 2.9e-87 326.2 204 70.6
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 2.9e-87 326.2 204 70.6
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 2.9e-87 326.2 204 70.6
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.7e-87 325.9 262 61.1
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 3.7e-87 325.9 205 72.7
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 6.4e-87 325.1 202 72.3
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 6.4e-87 325.1 198 73.7
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 6.4e-87 325.1 203 71.4
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 8.3e-87 324.7 204 70.6
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 8.3e-87 324.7 204 70.6
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 1.1e-86 324.3 204 70.1
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.1e-86 324.3 203 71.4
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 1.4e-86 323.9 205 72.2
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.4e-86 323.2 205 72.2
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 2.4e-86 323.2 203 70.9
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 3.2e-86 322.8 205 71.2
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.1e-86 322.4 214 67.8
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 4.1e-86 322.4 210 69.5
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.4e-86 322.0 214 67.8
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 5.4e-86 322.0 204 72.5
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 7.0e-86 321.6 204 69.1
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.6e-85 320.5 204 70.1
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 1.6e-85 320.5 204 72.1
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.0e-85 320.1 209 68.9
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.0e-85 320.1 237 62.0
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 2.7e-85 319.7 207 69.6
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 3.5e-85 319.3 229 66.4
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 3.5e-85 319.3 275 56.7
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 3.5e-85 319.3 204 69.6
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 4.6e-85 318.9 204 71.6
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.0e-84 317.8 205 69.3
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.0e-84 317.8 205 69.3
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.0e-84 317.8 205 70.2
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.0e-84 317.8 205 70.7
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.0e-84 317.8 203 70.4
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.3e-84 317.4 215 67.0
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 1.3e-84 317.4 204 72.1
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.3e-84 317.4 199 72.9
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 1.7e-84 317.0 211 69.7
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 3.0e-84 316.2 199 69.8
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 5.0e-84 315.5 199 72.4
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 6.6e-84 315.1 205 69.3
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 6.6e-84 315.1 205 69.3
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 8.6e-84 314.7 205 68.8
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 8.6e-84 314.7 209 67.5
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.5e-83 313.9 202 72.3
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.9e-83 313.5 224 64.3
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.9e-83 313.5 210 67.1
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 2.5e-83 313.2 204 70.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 3.3e-83 312.8 205 68.8
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 4.3e-83 312.4 204 70.6
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.6e-83 312.0 198 71.7
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 7.3e-83 311.6 209 67.5
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 9.5e-83 311.2 223 63.2
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 8.0e-82 308.1 194 71.6
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.1e-81 307.8 195 68.7
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.1e-81 307.8 198 71.2
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.8e-81 307.0 199 71.4
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.8e-81 307.0 188 71.8
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 4.0e-81 305.8 229 63.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 9.8e-80 301.2 256 57.0
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 6.4e-79 298.5 202 65.8
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 3.2e-78 296.2 246 58.1
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 4.6e-77 292.4 198 64.1
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 4.3e-75 285.8 205 61.5
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 8.9e-73 278.1 227 59.5
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.7e-68 263.8 206 58.3
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 5.6e-67 258.8 162 69.8
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 7.3e-67 258.5 162 68.5
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.9e-63 246.5 156 69.9
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.4e-62 244.2 213 56.8
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.6e-61 240.7 153 68.6
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.5e-59 234.2 161 71.4
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.5e-59 233.4 142 75.4
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 9.6e-59 231.5 198 55.1
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.3e-55 221.1 138 69.6
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 9.0e-49 198.4 122 68.9
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 7.9e-45 185.3 153 55.6
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 1.3e-44 184.5 181 49.2
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 9.0e-41 171.8 152 53.3
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 5.8e-32 142.5 126 52.4
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 6.9e-25 119.0 86 58.1
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 7.7e-16 89.0 66 65.2
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 1.4e-14 84.7 63 66.7
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.0e-12 78.6 56 67.9
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 8.8e-12 75.5 77 50.6
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.5e-11 74.7 44 75.0
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 3.3e-11 73.6 43 79.1
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 8.2e-10 68.9 45 66.7
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 9.1e-09 65.5 43 72.1
SEGI_31523 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 8.5e-07 58.9 42 64.3
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 2.5e-06 57.4 37 56.8


User provided reference genes

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