Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 3.9e-122 441.4 217 100.0
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 3.4e-89 332.0 207 77.3
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 4.4e-89 331.6 212 77.4
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 5.7e-89 331.3 207 77.3
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 5.7e-89 331.3 210 75.7
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 7.5e-89 330.9 210 76.2
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 9.8e-89 330.5 207 75.8
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.8e-87 326.2 207 75.4
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 5.4e-87 324.7 208 74.0
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 7.0e-87 324.3 209 73.2
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 7.0e-87 324.3 207 74.4
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 9.2e-87 323.9 208 74.0
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 2.0e-86 322.8 207 75.4
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.5e-86 322.0 207 72.5
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 4.6e-86 321.6 208 74.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 7.8e-86 320.9 209 74.2
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.0e-85 320.5 210 73.8
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-85 320.5 208 74.5
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.0e-85 320.5 208 75.5
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 1.3e-85 320.1 208 76.4
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.3e-85 320.1 212 73.6
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.7e-85 319.7 208 76.4
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-85 319.7 208 74.0
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 3.0e-85 318.9 208 75.0
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 3.9e-85 318.5 207 73.4
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 3.9e-85 318.5 208 74.0
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.9e-85 318.5 208 75.5
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 3.9e-85 318.5 210 73.3
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 5.0e-85 318.2 212 75.0
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.0e-85 318.2 208 74.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.0e-85 318.2 208 74.0
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 6.6e-85 317.8 206 73.8
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.6e-85 317.8 208 74.5
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.6e-85 317.8 208 75.0
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 6.6e-85 317.8 207 73.9
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 6.6e-85 317.8 207 73.9
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 8.6e-85 317.4 208 73.6
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.1e-84 317.0 210 75.7
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.1e-84 317.0 207 73.9
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 2.5e-84 315.8 207 73.4
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 3.3e-84 315.5 207 72.5
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.3e-84 315.5 207 74.9
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.3e-84 315.5 209 74.2
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.3e-84 315.1 208 75.5
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 4.3e-84 315.1 210 74.8
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.3e-84 315.1 208 74.0
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 5.6e-84 314.7 207 73.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 5.6e-84 314.7 207 73.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.2e-83 313.5 209 72.7
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.6e-83 313.2 206 73.3
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 2.1e-83 312.8 214 75.7
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.1e-83 312.8 210 73.3
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.8e-83 312.4 209 71.8
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 3.6e-83 312.0 210 72.9
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 6.2e-83 311.2 208 73.1
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.2e-83 311.2 209 71.3
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 6.2e-83 311.2 207 72.0
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 6.2e-83 311.2 209 71.8
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 8.0e-83 310.8 210 72.9
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 1.0e-82 310.5 207 72.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 1.0e-82 310.5 207 72.0
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.4e-82 310.1 213 71.4
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.4e-82 310.1 207 72.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.4e-82 310.1 207 72.0
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.8e-82 309.7 230 70.4
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.8e-82 309.7 205 71.7
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.3e-82 309.3 207 71.0
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 3.1e-82 308.9 208 72.6
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 5.2e-82 308.1 207 71.5
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 5.2e-82 308.1 207 72.9
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 8.9e-82 307.4 209 71.8
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.5e-81 306.6 209 71.8
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.0e-81 306.2 209 72.7
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 2.0e-81 306.2 215 70.7
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.0e-81 306.2 210 72.4
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 7.5e-81 304.3 217 69.6
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 7.5e-81 304.3 210 71.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.7e-80 303.1 223 69.1
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.7e-80 303.1 211 70.6
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.7e-80 303.1 215 69.3
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.2e-80 302.8 210 72.4
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 2.9e-80 302.4 207 70.0
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 3.7e-80 302.0 234 66.7
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 8.3e-80 300.8 212 71.2
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 5.4e-79 298.1 243 63.4
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.2e-78 297.0 207 69.1
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-75 285.0 229 63.3
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.4e-74 283.5 233 61.8
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 6.4e-72 274.6 207 67.6
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.6e-70 270.0 207 64.7
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.1e-70 269.6 169 74.0
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 6.0e-70 268.1 208 65.4
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.1e-69 265.0 209 64.1
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 5.1e-69 265.0 174 74.1
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 6.6e-69 264.6 217 65.0
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.1e-68 263.8 207 63.8
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.5e-68 263.5 172 75.6
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.4e-66 256.9 136 89.0
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 5.2e-66 255.0 206 61.2
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 6.4e-64 248.1 175 69.1
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.1e-61 238.4 148 74.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.6e-61 237.7 331 45.3
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 3.3e-60 235.7 220 58.2
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.3e-60 235.3 154 72.1
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 4.7e-59 231.9 209 57.4
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.0e-57 226.5 145 79.3
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 2.2e-56 223.0 156 70.5
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.2e-56 223.0 156 63.5
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 8.4e-56 221.1 211 55.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 8.1e-51 204.5 107 88.8
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.8e-50 203.4 129 67.4
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 8.7e-45 184.5 189 50.8
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.9e-39 166.8 164 50.0
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.1e-36 157.5 119 61.3
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 7.4e-28 128.3 63 90.5
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-24 117.5 63 79.4
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.6e-22 109.0 74 67.6
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 5.7e-20 102.1 144 41.0
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 9.7e-20 101.3 118 46.6
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.8e-19 99.0 89 57.3
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.3e-16 90.9 54 83.3


User provided reference genes

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