Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 2.0e-65 252.3 127 100.0
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 1.7e-61 239.2 119 100.0
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 6.6e-53 210.7 119 84.9
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 1.9e-52 209.1 119 84.0
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 1.9e-52 209.1 119 84.0
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 2.5e-52 208.8 119 84.9
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 3.3e-52 208.4 119 84.0
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 3.3e-52 208.4 119 84.0
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 7.3e-52 207.2 119 83.2
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 9.6e-52 206.8 124 81.5
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 1.2e-51 206.5 119 83.2
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 1.2e-51 206.5 122 79.5
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 2.1e-51 205.7 119 84.0
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 2.1e-51 205.7 119 82.4
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 2.8e-51 205.3 119 83.2
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 4.7e-51 204.5 119 84.0
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 4.7e-51 204.5 119 84.0
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 8.1e-51 203.8 119 82.4
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.4e-50 203.0 119 81.5
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 1.8e-50 202.6 119 81.5
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 1.8e-50 202.6 113 85.8
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 4.0e-50 201.4 119 79.8
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 6.9e-50 200.7 119 81.5
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 9.0e-50 200.3 119 80.7
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 9.0e-50 200.3 119 80.7
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 9.0e-50 200.3 119 79.8
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 1.5e-49 199.5 119 80.7
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 1.5e-49 199.5 119 79.8
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 2.0e-49 199.1 119 80.7
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 2.6e-49 198.7 119 79.8
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 2.6e-49 198.7 119 80.7
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 2.6e-49 198.7 119 79.8
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 4.4e-49 198.0 119 79.8
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 4.4e-49 198.0 125 76.0
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 4.4e-49 198.0 119 78.2
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 4.4e-49 198.0 119 78.2
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 5.8e-49 197.6 119 79.0
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 5.8e-49 197.6 121 76.9
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 7.6e-49 197.2 118 78.8
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 1.3e-48 196.4 126 74.6
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 1.7e-48 196.1 121 76.0
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 2.2e-48 195.7 119 79.8
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 2.2e-48 195.7 119 79.8
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.9e-48 195.3 119 76.5
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 77.3
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 3.8e-48 194.9 119 79.0
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 4.9e-48 194.5 119 78.2
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 4.9e-48 194.5 119 78.2
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 4.9e-48 194.5 119 78.2
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 6.4e-48 194.1 119 78.2
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 8.4e-48 193.7 119 78.2
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 8.4e-48 193.7 119 79.0
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 1.1e-47 193.4 119 77.3
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 1.1e-47 193.4 119 78.2
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 1.4e-47 193.0 119 77.3
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 2.4e-47 192.2 119 76.5
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 2.4e-47 192.2 119 76.5
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 2.4e-47 192.2 119 77.3
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 3.2e-47 191.8 119 76.5
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 3.2e-47 191.8 119 76.5
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 5.4e-47 191.0 119 76.5
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 7.1e-47 190.7 119 73.9
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 7.1e-47 190.7 119 78.2
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 9.3e-47 190.3 119 73.1
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 9.3e-47 190.3 119 74.8
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 9.3e-47 190.3 117 76.1
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 1.6e-46 189.5 119 74.8
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.6e-46 189.5 119 76.5
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 2.1e-46 189.1 119 76.5
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 2.7e-46 188.7 119 73.1
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 3.5e-46 188.3 119 77.3
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 4.6e-46 188.0 119 73.1
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.0e-45 186.8 109 80.7
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 1.3e-45 186.4 119 73.1
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 1.3e-45 186.4 119 73.9
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 1.7e-45 186.0 119 74.8
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 1.7e-45 186.0 119 73.9
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 2.3e-45 185.7 119 73.9
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 3.9e-45 184.9 119 73.9
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 3.9e-45 184.9 119 73.1
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 5.1e-45 184.5 119 72.3
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 5.1e-45 184.5 119 73.1
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 6.6e-45 184.1 119 73.1
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 8.7e-45 183.7 119 72.3
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 8.7e-45 183.7 119 74.8
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 8.7e-45 183.7 119 73.1
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 1.1e-44 183.3 119 72.3
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 1.1e-44 183.3 119 71.4
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 1.5e-44 183.0 119 73.1
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 1.5e-44 183.0 119 73.1
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 1.9e-44 182.6 119 71.4
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 5.6e-44 181.0 119 71.4
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 9.6e-44 180.3 119 73.9
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 9.6e-44 180.3 120 73.3
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 1.3e-43 179.9 119 70.6
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 2.4e-42 175.6 113 72.6
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 2.4e-42 175.6 119 70.6
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 2.4e-42 175.6 119 70.6
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 9.0e-42 173.7 119 71.4
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.2e-41 173.3 113 71.7
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 1.2e-41 173.3 113 71.7
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 1.2e-41 173.3 119 70.6
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 1.5e-41 172.9 119 69.7
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 5.8e-41 171.0 122 65.6
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 9.9e-41 170.2 97 82.5
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.3e-40 169.9 111 74.8
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.6e-38 162.9 119 64.7
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 4.6e-38 161.4 113 71.7
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 1.0e-37 160.2 119 64.7
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 2.3e-37 159.1 117 65.8
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 6.7e-37 157.5 119 63.9
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 6.2e-35 151.0 102 71.6
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 6.2e-35 151.0 114 59.6
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 1.8e-34 149.4 95 73.7
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 5.3e-34 147.9 114 56.1
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.2e-33 146.7 95 71.6
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 2.2e-32 142.5 94 74.5
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 1.3e-29 133.3 99 57.6
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 1.3e-29 133.3 134 50.0
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 5.1e-29 131.3 84 72.6
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.1e-28 130.2 92 72.8
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.1e-28 130.2 81 74.1
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 1.5e-28 129.8 83 72.3
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.5e-28 129.0 84 72.6
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 4.3e-28 128.3 132 48.5
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 5.6e-28 127.9 125 49.6
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 1.4e-26 123.2 88 69.3
arahy.Tifrunner.gnm1.ann1.3DP3ZG Arachis hypogaea HOM05D005344 ORTHO05D006444 4.6e-14 81.6 51 74.5
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.0e-08 63.9 40 70.0
CSS0035037 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 8.5e-08 60.8 38 76.3
CBR_g48744 Chara braunii HOM05D005344 ORTHO05D006444 2.5e-07 59.3 50 52.0


User provided reference genes

Program Settings