Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 2.2e-134 482.3 239 100.0
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 5.7e-114 414.5 233 89.3
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 5.1e-54 215.3 251 49.8
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 5.6e-53 211.8 258 49.2
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 2.1e-52 209.9 253 48.6
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 8.1e-52 208.0 251 50.2
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 1.8e-51 206.8 233 50.2
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 4.0e-51 205.7 249 45.4
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 1.2e-50 204.1 248 48.4
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 2.0e-50 203.4 257 47.1
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 4.4e-50 202.2 257 45.9
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 4.4e-50 202.2 251 45.8
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 5.8e-50 201.8 255 45.5
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 9.9e-50 201.1 251 45.4
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 2.2e-49 199.9 257 45.5
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 2.2e-49 199.9 251 47.4
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 3.8e-49 199.1 246 47.2
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 3.8e-49 199.1 243 47.3
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 3.8e-49 199.1 235 48.5
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 3.8e-49 199.1 233 47.2
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 6.4e-49 198.4 236 48.7
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 8.4e-49 198.0 251 45.4
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 1.1e-48 197.6 250 47.6
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 1.4e-48 197.2 250 47.2
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 3.2e-48 196.1 253 43.1
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 4.1e-48 195.7 245 45.3
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 4.1e-48 195.7 254 43.3
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 5.4e-48 195.3 241 47.7
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 9.2e-48 194.5 250 45.6
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.1e-47 193.4 247 47.4
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.1e-47 193.4 250 45.2
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 2.7e-47 193.0 240 47.9
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 2.7e-47 193.0 259 42.9
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 6.0e-47 191.8 229 46.7
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 6.0e-47 191.8 259 43.6
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 7.8e-47 191.4 247 45.3
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 1.0e-46 191.0 243 42.4
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 1.0e-46 191.0 241 45.2
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 1.3e-46 190.7 246 47.6
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 2.3e-46 189.9 250 43.6
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 3.0e-46 189.5 235 46.0
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 3.0e-46 189.5 255 45.9
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 5.1e-46 188.7 239 47.3
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 5.1e-46 188.7 247 45.3
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 5.1e-46 188.7 241 45.2
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 5.1e-46 188.7 234 46.6
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 6.6e-46 188.3 251 43.8
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 1.1e-45 187.6 235 48.5
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 1.5e-45 187.2 232 45.7
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 1.5e-45 187.2 240 45.0
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 1.5e-45 187.2 255 43.1
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 1.9e-45 186.8 256 43.8
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 1.9e-45 186.8 247 42.9
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.9e-45 186.8 247 43.3
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 1.9e-45 186.8 250 45.2
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 2.5e-45 186.4 242 43.4
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 2.5e-45 186.4 258 43.0
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 4.3e-45 185.7 259 43.2
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 4.3e-45 185.7 246 43.5
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 7.3e-45 184.9 243 44.4
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 7.3e-45 184.9 256 43.8
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 1.2e-44 184.1 248 44.0
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.6e-44 183.7 247 42.5
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 2.1e-44 183.3 248 44.4
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 2.1e-44 183.3 247 43.3
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 2.8e-44 183.0 258 43.8
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 3.6e-44 182.6 252 44.0
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 3.6e-44 182.6 243 44.9
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 4.7e-44 182.2 242 44.2
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 8.1e-44 181.4 246 44.3
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.1e-43 181.0 237 43.5
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 1.1e-43 181.0 269 42.8
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 1.4e-43 180.6 242 43.8
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 1.8e-43 180.3 235 44.7
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 2.4e-43 179.9 241 45.2
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 4.0e-43 179.1 254 43.7
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 2.0e-42 176.8 237 44.3
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 2.6e-42 176.4 303 38.0
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 5.8e-42 175.3 233 43.3
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 7.6e-42 174.9 250 44.0
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 1.7e-41 173.7 248 41.5
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 2.2e-41 173.3 240 41.2
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 3.8e-41 172.6 231 45.0
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 1.1e-40 171.0 245 41.2
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 1.4e-40 170.6 243 41.6
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 1.9e-40 170.2 244 43.4
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 1.9e-40 170.2 263 40.3
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 3.2e-40 169.5 236 43.2
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 4.2e-40 169.1 239 43.9
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 4.2e-40 169.1 238 45.8
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 1.6e-39 167.2 252 41.7
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 4.6e-39 165.6 240 43.3
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 4.6e-39 165.6 243 42.8
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 4.6e-39 165.6 240 43.3
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 4.6e-39 165.6 243 42.8
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 6.0e-39 165.2 284 37.0
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 1.5e-37 160.6 264 39.8
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 2.4e-35 153.3 114 61.4
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 1.5e-34 150.6 257 37.4
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 1.3e-33 147.5 197 44.2
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 3.2e-32 142.9 114 58.8
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 8.7e-30 134.8 143 44.1
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.4e-24 116.7 101 51.5
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 4.6e-23 112.5 244 34.0
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 6.0e-23 112.1 229 37.1
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 7.9e-23 111.7 186 39.8
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 8.7e-22 108.2 293 31.7
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.9e-21 107.1 75 68.0
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 9.0e-19 98.2 184 35.9
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 4.9e-17 92.4 170 40.0
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 8.4e-17 91.7 208 32.2
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 3.2e-16 89.7 99 53.5
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 3.3e-13 79.7 98 38.8
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 1.3e-09 67.8 105 38.1
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 2.5e-08 63.5 52 57.7
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 1.6e-07 60.8 174 25.9


User provided reference genes

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