Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 3.1e-113 411.8 204 100.0
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 3.3e-70 268.9 164 77.4
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 3.6e-69 265.4 180 72.8
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 4.0e-68 261.9 162 77.8
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.5e-67 260.0 171 72.5
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.0e-67 259.6 167 74.3
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 4.4e-67 258.5 161 75.8
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 9.9e-67 257.3 160 75.6
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 9.9e-67 257.3 171 71.3
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.9e-66 255.8 160 74.4
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.8e-66 255.4 160 76.9
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.8e-66 255.4 169 72.8
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.1e-65 253.8 182 67.6
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.4e-65 253.4 170 72.4
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 5.4e-65 251.5 165 72.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.2e-64 250.4 169 71.6
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.7e-64 249.2 162 72.2
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.7e-64 249.2 160 72.5
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.5e-64 248.8 169 71.0
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 4.6e-64 248.4 156 75.0
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 7.9e-64 247.7 165 70.9
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 7.9e-64 247.7 167 70.7
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.3e-63 246.9 159 74.2
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 2.3e-63 246.1 174 70.1
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 3.0e-63 245.7 167 70.1
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 3.0e-63 245.7 170 70.0
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.9e-63 245.4 167 68.9
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 6.6e-63 244.6 189 64.0
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.6e-63 244.6 179 67.6
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-62 243.8 179 67.6
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.9e-62 243.0 167 69.5
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.3e-62 242.3 179 67.0
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 3.3e-62 242.3 167 68.9
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.3e-62 241.9 163 73.0
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 4.3e-62 241.9 175 67.4
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.3e-62 241.9 163 69.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 9.6e-62 240.7 163 72.4
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.3e-61 240.4 158 71.5
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.3e-61 240.4 174 69.0
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.3e-61 240.4 160 73.8
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.6e-61 240.0 174 68.4
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.6e-61 240.0 168 67.3
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.6e-61 240.0 171 66.7
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.1e-61 239.6 176 68.2
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 6.2e-61 238.0 164 70.7
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 8.1e-61 237.7 161 70.8
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 8.1e-61 237.7 176 69.9
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.8e-60 236.5 165 69.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.4e-60 236.1 161 72.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 4.0e-60 235.3 161 70.2
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 2.6e-59 232.6 174 67.2
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 7.6e-59 231.1 164 69.5
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.3e-58 230.3 170 63.5
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.3e-58 230.3 170 68.2
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 2.2e-58 229.6 169 65.7
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.9e-58 229.2 171 66.1
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.9e-58 229.2 171 65.5
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.9e-58 229.2 167 70.7
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.4e-57 226.9 166 66.9
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.4e-57 226.1 161 70.8
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 7.1e-57 224.6 246 52.0
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 9.3e-57 224.2 171 63.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.6e-56 223.4 172 65.1
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.6e-56 223.4 150 70.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.5e-56 222.2 174 67.2
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.9e-55 218.8 135 79.3
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 5.1e-55 218.4 173 61.8
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 6.7e-55 218.0 167 66.5
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.9e-54 216.5 170 61.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 2.5e-54 216.1 170 60.6
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 3.3e-54 215.7 170 60.6
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 3.3e-54 215.7 169 62.1
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 5.6e-54 214.9 170 60.6
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 5.6e-54 214.9 175 60.6
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 7.4e-54 214.5 180 62.8
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 7.4e-54 214.5 170 60.6
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.3e-53 213.8 175 60.0
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.6e-53 213.4 170 61.8
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.6e-53 213.4 179 62.0
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 2.8e-53 212.6 170 61.8
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 3.7e-53 212.2 170 61.2
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 4.8e-53 211.8 165 63.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 6.2e-53 211.5 180 61.7
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 5.3e-52 208.4 170 60.6
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 9.0e-52 207.6 132 72.7
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 2.6e-51 206.1 134 73.1
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.5e-51 205.3 170 58.8
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 5.8e-51 204.9 126 77.8
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 7.6e-51 204.5 133 72.9
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.0e-50 204.1 150 67.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 5.5e-49 198.4 122 75.4
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 4.6e-48 195.3 122 73.8
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 6.1e-40 168.3 157 51.6
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.7e-39 164.9 110 69.1
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.7e-38 161.8 164 48.8
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.0e-36 154.5 179 49.7
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.5e-35 153.7 185 47.0
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 5.9e-35 151.8 148 56.8
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.1e-32 143.3 170 50.0
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 4.1e-28 129.0 172 46.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 9.1e-28 127.9 81 70.4
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.2e-27 127.5 84 72.6
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 9.7e-22 107.8 116 49.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.7e-21 107.1 153 39.9
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 8.2e-21 104.8 70 64.3
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.4e-20 103.2 114 45.6
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.1e-17 94.4 60 73.3
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.2e-17 92.4 165 39.4
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 4.2e-17 92.4 138 39.1
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 5.2e-15 85.5 51 72.5
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 9.4e-09 64.7 40 75.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 6.8e-07 58.5 74 44.6
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 3.4e-06 56.2 38 68.4


User provided reference genes

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