Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1245 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 3.8e-123 444.9 229 100.0
CDE05G3275 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 7.1e-106 387.5 219 90.4
Actinidia17760 Actinidia chinensis HOM05D005414 ORTHO05D006844 7.4e-71 271.2 226 58.4
Ciclev10002272m.g Citrus clementina HOM05D005414 ORTHO05D006844 1.0e-67 260.8 219 56.6
GSVIVG01013697001 Vitis vinifera HOM05D005414 ORTHO05D006844 1.3e-67 260.4 219 59.4
Duzib041G0057 Durio zibethinus HOM05D005414 ORTHO05D006844 2.9e-67 259.2 219 57.5
Rhsim06G0093200 Rhododendron simsii HOM05D005414 ORTHO05D006844 5.0e-67 258.5 219 57.5
Sabra05G0151200 Salix brachista HOM05D005414 ORTHO05D006844 6.5e-67 258.1 223 57.0
MBI04_g42207_MAGBIO Magnolia biondii HOM05D005414 ORTHO05D006844 1.1e-66 257.3 241 53.9
CSS0025663 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 1.5e-66 256.9 219 57.5
CSS0029717 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 1.5e-66 256.9 219 58.0
Phvul.007G085100 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 2.5e-66 256.1 225 56.9
RcHm_v2.0_Chr6g0273701 Rosa chinensis HOM05D005414 ORTHO05D006844 1.2e-65 253.8 227 55.5
Cc10_g06420 Coffea canephora HOM05D005414 ORTHO05D006844 1.6e-65 253.4 221 56.1
Potri.002G062600 Populus trichocarpa HOM05D005414 ORTHO05D006844 2.7e-65 252.7 225 56.9
Atru.chr13.1979 Acer truncatum HOM05D005414 ORTHO05D006844 3.6e-65 252.3 219 55.3
Prupe.8G044100 Prunus persica HOM05D005414 ORTHO05D006844 3.6e-65 252.3 227 54.6
arahy.Tifrunner.gnm1.ann1.X1PAW1 Arachis hypogaea HOM05D005414 ORTHO05D006844 8.0e-65 251.1 224 57.1
CiPaw.16G007400 Carya illinoinensis HOM05D005414 ORTHO05D006844 8.0e-65 251.1 219 54.8
Migut.C00158 Erythranthe guttata HOM05D005414 ORTHO05D006844 8.0e-65 251.1 219 53.4
FvH4_2g12810 Fragaria vesca HOM05D005414 ORTHO05D006844 2.3e-64 249.6 219 57.1
arahy.Tifrunner.gnm1.ann1.66PYZ2 Arachis hypogaea HOM05D005414 ORTHO05D006844 6.8e-64 248.1 224 56.2
VMungo0720G1060 Vigna mungo HOM05D005414 ORTHO05D006844 6.8e-64 248.1 228 53.9
Thecc.08G163500 Theobroma cacao HOM05D005414 ORTHO05D006844 2.0e-63 246.5 219 54.8
Lj5g0014662 Lotus japonicus HOM05D005414 ORTHO05D006844 5.7e-63 245.0 214 57.5
FAN27G1467 Fragaria x ananassa HOM05D005414 ORTHO05D006844 7.5e-63 244.6 219 55.7
Eucgr.F02672 Eucalyptus grandis HOM05D005414 ORTHO05D006844 2.2e-62 243.0 215 54.0
Hma1.2p1_2282F.1_g318850 Hydrangea macrophylla HOM05D005414 ORTHO05D006844 2.2e-62 243.0 219 57.1
Gohir.A06G116400 Gossypium hirsutum HOM05D005414 ORTHO05D006844 1.1e-61 240.7 219 55.7
MD10G1038100 Malus domestica HOM05D005414 ORTHO05D006844 1.4e-61 240.4 224 54.5
TAR628G0132 Trochodendron aralioides HOM05D005414 ORTHO05D000799 2.4e-61 239.6 212 59.4
Glyma.20G171300 Glycine max HOM05D005414 ORTHO05D006844 5.3e-61 238.4 228 51.8
Gorai.010G131400 Gossypium raimondii HOM05D005414 ORTHO05D006844 5.3e-61 238.4 220 54.5
Medtr1g097430 Medicago truncatula HOM05D005414 ORTHO05D006844 7.0e-61 238.0 225 51.6
TPR.G17052 Trifolium pratense HOM05D005414 ORTHO05D006844 9.1e-61 237.7 219 52.1
SalBow7G3693 Salvia bowleyana HOM05D005414 ORTHO05D006844 1.2e-60 237.3 218 50.0
Lalb_Chr02g0141631 Lupinus albus HOM05D005414 ORTHO05D006844 5.9e-60 235.0 219 53.4
Nn5g28873 Nelumbo nucifera HOM05D005414 ORTHO05D000799 7.7e-60 234.6 196 60.7
HanXRQChr05g0144171 Helianthus annuus HOM05D005414 ORTHO05D006844 1.3e-59 233.8 224 49.1
Phvul.007G085000 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 1.3e-59 233.8 228 52.6
Os06g0581300 Oryza sativa ssp. japonica HOM05D005414 ORTHO05D006844 1.7e-59 233.4 222 51.4
Psat6g189560 Pisum sativum HOM05D005414 ORTHO05D006844 1.7e-59 233.4 219 51.6
SGA_v2.0_scaffold188G40302 Striga asiatica HOM05D005414 ORTHO05D006844 2.2e-59 233.0 213 53.1
PGR042G0638 Punica granatum HOM05D005414 ORTHO05D006844 2.9e-59 232.6 219 53.9
PSO210G6322 Papaver somniferum HOM05D005414 ORTHO05D006844 1.5e-58 230.3 223 52.9
Zm00001eb385480 Zea mays HOM05D005414 ORTHO05D006844 1.9e-58 229.9 219 53.0
Solyc04g072050.4 Solanum lycopersicum HOM05D005414 ORTHO05D006844 2.5e-58 229.6 216 50.5
Sopen04g028220 Solanum pennellii HOM05D005414 ORTHO05D006844 2.5e-58 229.6 216 50.5
Sc26g0002600 Simmondsia chinensis HOM05D005414 ORTHO05D006844 3.2e-58 229.2 219 52.5
Gohir.D06G114900 Gossypium hirsutum HOM05D005414 ORTHO05D006844 4.2e-58 228.8 219 53.4
PGSC0003DMG400031145 Solanum tuberosum HOM05D005414 ORTHO05D006844 4.2e-58 228.8 216 50.5
MSTRG.24938 Avicennia marina HOM05D005414 ORTHO05D006844 1.6e-57 226.9 213 53.5
PSO170G2436 Papaver somniferum HOM05D005414 ORTHO05D006844 2.7e-57 226.1 223 52.0
THA.LOC104809748 Tarenaya hassleriana HOM05D005414 ORTHO05D006844 2.7e-57 226.1 221 52.0
vmacro21198 Vaccinium macrocarpon HOM05D005414 ORTHO05D006844 6.1e-57 224.9 188 58.5
Manes.18G096200 Manihot esculenta HOM05D005414 ORTHO05D006844 1.8e-56 223.4 188 56.9
Aqoxy5G02011 Aquilegia oxysepala HOM05D005414 ORTHO05D006844 2.3e-56 223.0 197 58.9
ECA232G1443 Erigeron canadensis HOM05D005414 ORTHO05D006844 2.0e-55 219.9 225 48.0
QL02p036452 Quercus lobata HOM05D005414 ORTHO05D006844 3.4e-55 219.2 206 53.9
Peaxi162Scf00226g00114 Petunia axillaris HOM05D005414 ORTHO05D006844 2.2e-54 216.5 246 45.1
FAN24G1739 Fragaria x ananassa HOM05D005414 ORTHO05D006844 9.1e-53 211.1 244 48.4
Oeu061453.3 Olea europaea HOM05D005414 ORTHO05D006844 2.0e-52 209.9 185 54.1
Aa31LG7G6700 Aethionema arabicum HOM05D005414 ORTHO05D006844 7.7e-52 208.0 221 48.4
Thhalv10008541m.g Eutrema salsugineum HOM05D005414 ORTHO05D006844 7.7e-52 208.0 221 48.0
AT1G22750 Arabidopsis thaliana HOM05D005414 ORTHO05D006844 2.3e-51 206.5 221 48.9
Sp1g20260 Schrenkiella parvula HOM05D005414 ORTHO05D006844 8.6e-51 204.5 221 47.5
Sed0023257 Sechium edule HOM05D005414 ORTHO05D006844 8.6e-51 204.5 219 47.9
TWI60G0913 Tripterygium wilfordii HOM05D005414 ORTHO05D006844 8.6e-51 204.5 191 53.4
AL1G36290 Arabidopsis lyrata HOM05D005414 ORTHO05D006844 1.1e-50 204.1 221 48.9
Solyc04g072031.1 Solanum lycopersicum HOM05D005414 ORTHO05D006844 1.9e-50 203.4 195 50.3
BcaNung07190 Brassica carinata HOM05D005414 ORTHO05D006844 2.5e-50 203.0 221 47.1
BolC5t30882H Brassica oleracea HOM05D005414 ORTHO05D006844 3.3e-50 202.6 221 47.1
Glyma.20G171400 Glycine max HOM05D005414 ORTHO05D006844 3.3e-50 202.6 230 47.0
Carub.0001s2226 Capsella rubella HOM05D005414 ORTHO05D006844 4.2e-50 202.2 221 48.4
A09p41990 Brassica napus HOM05D005414 ORTHO05D006844 5.5e-50 201.8 221 47.1
BraA09t39686Z Brassica rapa HOM05D005414 ORTHO05D006844 5.5e-50 201.8 221 47.1
CAN.G564.21 Capsicum annuum HOM05D005414 ORTHO05D006844 1.2e-49 200.7 198 51.0
CsaV3_6G004870 Cucumis sativus L. HOM05D005414 ORTHO05D006844 1.6e-49 200.3 231 46.8
BcaNung07397 Brassica carinata HOM05D005414 ORTHO05D006844 2.8e-49 199.5 221 46.2
C05p21870 Brassica napus HOM05D005414 ORTHO05D006844 2.8e-49 199.5 221 46.2
unitig_32.g11168 Utricularia gibba HOM05D005414 ORTHO05D006844 6.1e-49 198.4 216 49.1
MELO3C030042.2 Cucumis melo HOM05D005414 ORTHO05D006844 1.0e-48 197.6 220 47.7
DCAR_009609 Daucus carota HOM05D005414 ORTHO05D006844 8.9e-48 194.5 165 53.9
QL02p036925 Quercus lobata HOM05D005414 ORTHO05D006844 8.9e-48 194.5 275 41.1
MELO3C019962.2 Cucumis melo HOM05D005414 ORTHO05D006844 8.3e-46 188.0 221 46.2
CANSAT25G0738 Cannabis sativa HOM05D005414 ORTHO05D006844 4.1e-45 185.7 219 45.7
CsaV3_6G004860 Cucumis sativus L. HOM05D005414 ORTHO05D006844 2.0e-44 183.3 220 43.2
Potri.005G198600 Populus trichocarpa HOM05D005414 ORTHO05D006844 2.0e-44 183.3 195 49.7
ClCG08G007190 Citrullus lanatus HOM05D005414 ORTHO05D006844 3.5e-44 182.6 219 45.7
Hund26672 Selenicereus undatus HOM05D005414 ORTHO05D006844 7.8e-44 181.4 164 51.8
Sabra02G0050500 Salix brachista HOM05D005414 ORTHO05D006844 8.6e-43 177.9 188 50.5
Lsat_1_v5_gn_9_42501 Lactuca sativa HOM05D005414 ORTHO05D006844 3.1e-40 169.5 221 42.1
CAN.G564.22 Capsicum annuum HOM05D005414 ORTHO05D006844 1.2e-39 167.5 198 41.9
Lsat_1_v5_gn_4_170780 Lactuca sativa HOM05D005414 ORTHO05D006844 2.0e-39 166.8 221 41.6
HanXRQChr11g0320151 Helianthus annuus HOM05D005414 ORTHO05D006844 7.0e-37 158.3 218 39.4
Lsat_1_v5_gn_9_42481 Lactuca sativa HOM05D005414 ORTHO05D006844 3.5e-36 156.0 200 43.5
Nitab4.5_0001000g0190 Nicotiana tabacum HOM05D005414 ORTHO05D006844 3.9e-35 152.5 215 40.0
HanXRQChr11g0320131 Helianthus annuus HOM05D005414 ORTHO05D006844 1.5e-34 150.6 199 40.7
ECA232G3911 Erigeron canadensis HOM05D005414 ORTHO05D006844 3.3e-34 149.4 202 41.1
Nitab4.5_0007691g0020 Nicotiana tabacum HOM05D005414 ORTHO05D006844 2.8e-33 146.4 215 39.5
FAN15G1775 Fragaria x ananassa HOM05D005414 ORTHO05D006844 1.4e-32 144.1 251 36.3
HanXRQChr11g0320121 Helianthus annuus HOM05D005414 ORTHO05D006844 6.8e-32 141.7 199 38.7
Cpa.g.sc26.122 Carica papaya HOM05D005414 ORTHO05D006844 1.5e-31 140.6 147 43.5
HPP92_008789 Vanilla planifolia HOM05D005414 ORTHO05D006844 5.8e-31 138.7 109 61.5
HanXRQChr11g0320141 Helianthus annuus HOM05D005414 ORTHO05D006844 4.9e-30 135.6 221 35.7
ATR1120G143 Amborella trichopoda HOM05D005414 ORTHO05D006844 1.1e-29 134.4 109 60.6
HanXRQChr15g0485041 Helianthus annuus HOM05D005414 ORTHO05D006844 5.4e-29 132.1 195 39.5
Sopen04g028200 Solanum pennellii HOM05D005414 ORTHO05D006844 3.9e-27 125.9 109 54.1
HanXRQChr07g0196141 Helianthus annuus HOM05D005414 ORTHO05D006844 5.1e-27 125.6 202 37.6
SEGI_39181 Sequoiadendron giganteum HOM05D005414 ORTHO05D006844 2.5e-26 123.2 118 51.7
CARHR023110 Cardamine hirsuta HOM05D005414 ORTHO05D006844 8.1e-25 118.2 136 44.9
Lsat_1_v5_gn_2_41300 Lactuca sativa HOM05D005414 ORTHO05D006844 6.8e-24 115.2 161 37.3
HanXRQChr15g0484681 Helianthus annuus HOM05D005414 ORTHO05D006844 1.5e-23 114.0 215 34.9
EL10Ac1g01628 Beta vulgaris HOM05D005414 ORTHO05D006844 2.0e-23 113.6 147 44.2
Lsat_1_v5_gn_1_83841 Lactuca sativa HOM05D005414 ORTHO05D006844 1.3e-22 110.9 192 34.9
HanXRQChr15g0484961 Helianthus annuus HOM05D005414 ORTHO05D006844 2.9e-22 109.8 201 37.8
Pp3c21_15140 Physcomitrium patens HOM05D005414 ORTHO05D006844 6.4e-22 108.6 104 50.0
SMO331G0045 Selaginella moellendorffii HOM05D005414 ORTHO05D006844 7.8e-20 101.7 103 47.6
ECA232G0081 Erigeron canadensis HOM05D005414 ORTHO05D006844 8.6e-19 98.2 150 38.0
AUR62032103 Chenopodium quinoa HOM05D005414 ORTHO05D006844 4.3e-18 95.9 165 34.5
AagrBONN_evm.TU.Sc2ySwM_228.1176 Anthoceros agrestis HOM05D005414 ORTHO05D006844 5.6e-18 95.5 104 51.0
CBR_g58808 Chara braunii HOM05D005414 ORTHO05D006844 2.1e-17 93.6 117 43.6
TPR.G31416 Trifolium pratense HOM05D005414 ORTHO05D006844 6.8e-16 88.6 106 42.5
Lsat_1_v5_gn_1_83961 Lactuca sativa HOM05D005414 ORTHO05D006844 2.6e-15 86.7 165 34.5
Sed0017348 Sechium edule HOM05D005414 ORTHO05D006844 3.8e-14 82.8 111 45.0
Mapoly0067s0091 Marchantia polymorpha HOM05D005414 ORTHO05D006844 2.4e-13 80.1 104 42.3
Lsat_1_v5_gn_1_117841 Lactuca sativa HOM05D001315 ORTHO05D004199 7.1e-13 78.6 126 44.4
Lsat_1_v5_gn_1_20800 Lactuca sativa HOM05D000069 ORTHO05D006844 1.6e-12 77.4 122 45.1
HanXRQChr11g0320081 Helianthus annuus HOM05D005414 ORTHO05D006844 3.0e-11 73.2 74 47.3
Lsat_1_v5_gn_9_72760 Lactuca sativa HOM05D005414 ORTHO05D006844 1.3e-09 67.8 222 24.3
ECA233G0443 Erigeron canadensis HOM05D005414 ORTHO05D006844 4.8e-09 65.9 73 42.5
AUR62034915 Chenopodium quinoa HOM05D005414 ORTHO05D006844 8.1e-09 65.1 116 36.2
Pp3c18_14820 Physcomitrium patens HOM05D005414 ORTHO05D006844 4.9e-06 55.8 42 61.9


User provided reference genes

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