Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.4e-34 149.1 76 100.0
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 8.9e-21 103.2 74 73.0
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 7.5e-20 100.1 64 79.7
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 7.5e-20 100.1 64 76.6
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.7e-19 99.0 67 74.6
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 2.9e-19 98.2 59 81.4
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 2.9e-19 98.2 60 78.3
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 3.7e-19 97.8 63 77.8
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.7e-19 97.8 59 79.7
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.7e-19 97.8 59 79.7
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.7e-19 97.8 59 79.7
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.7e-19 97.8 59 79.7
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 3.7e-19 97.8 64 75.0
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 3.7e-19 97.8 62 77.4
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 4.9e-19 97.4 61 80.3
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 6.4e-19 97.1 61 80.3
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 6.4e-19 97.1 79 65.8
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.1e-18 96.3 62 82.3
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.4e-18 95.9 59 81.4
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.4e-18 95.9 59 81.4
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.4e-18 95.9 59 81.4
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.4e-18 95.9 59 81.4
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 1.4e-18 95.9 61 78.7
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 1.9e-18 95.5 75 72.0
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 2.4e-18 95.1 74 68.9
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 3.2e-18 94.7 62 75.8
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 3.2e-18 94.7 58 79.3
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 3.2e-18 94.7 67 71.6
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 3.2e-18 94.7 57 82.5
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 4.1e-18 94.4 59 78.0
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 4.1e-18 94.4 58 79.3
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 4.1e-18 94.4 57 84.2
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.1e-18 94.4 61 75.4
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 5.4e-18 94.0 62 79.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 5.4e-18 94.0 57 78.9
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 9.2e-18 93.2 69 69.6
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 9.2e-18 93.2 64 71.9
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 9.2e-18 93.2 62 75.8
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 1.2e-17 92.8 63 76.2
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.2e-17 92.8 61 77.0
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 1.2e-17 92.8 73 65.8
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.2e-17 92.8 57 78.9
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.2e-17 92.8 62 77.4
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 1.6e-17 92.4 61 75.4
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.6e-17 92.4 60 75.0
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.6e-17 92.4 60 75.0
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 1.6e-17 92.4 61 75.4
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 2.1e-17 92.0 62 75.8
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.1e-17 92.0 61 77.0
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 2.7e-17 91.7 68 67.6
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.7e-17 91.7 61 77.0
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 2.7e-17 91.7 70 68.6
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.6e-17 90.9 67 68.7
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 4.6e-17 90.9 58 79.3
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 6.0e-17 90.5 73 65.8
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 6.0e-17 90.5 62 75.8
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 6.0e-17 90.5 72 65.3
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 6.0e-17 90.5 66 74.2
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 7.8e-17 90.1 63 73.0
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 1.3e-16 89.4 55 81.8
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.3e-16 89.4 74 66.2
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 1.7e-16 89.0 62 74.2
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 1.7e-16 89.0 55 80.0
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 2.3e-16 88.6 71 67.6
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 3.0e-16 88.2 61 73.8
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 3.0e-16 88.2 56 80.4
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 3.9e-16 87.8 67 67.2
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 5.1e-16 87.4 53 81.1
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 5.1e-16 87.4 73 64.4
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 8.6e-16 86.7 75 65.3
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.5e-15 85.9 57 78.9
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.9e-15 85.5 72 63.9
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 2.5e-15 85.1 62 72.6
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 3.3e-15 84.7 74 63.5
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 4.3e-15 84.3 69 65.2
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 5.6e-15 84.0 74 63.5
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 5.6e-15 84.0 73 63.0
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 5.6e-15 84.0 61 70.5
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 5.6e-15 84.0 73 61.6
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 7.3e-15 83.6 72 62.5
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 7.3e-15 83.6 74 62.2
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 7.3e-15 83.6 74 62.2
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 9.5e-15 83.2 73 60.3
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 9.5e-15 83.2 53 77.4
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 9.5e-15 83.2 73 60.3
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 9.5e-15 83.2 56 76.8
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.2e-14 82.8 72 63.9
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.6e-14 82.4 73 60.3
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.1e-14 82.0 53 75.5
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 2.1e-14 82.0 70 64.3
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 2.1e-14 82.0 70 64.3
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 2.1e-14 82.0 70 64.3
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 2.1e-14 82.0 52 76.9
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 2.8e-14 81.6 68 63.2
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 1.1e-13 79.7 58 72.4
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 4.0e-13 77.8 93 51.6
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 5.2e-13 77.4 95 50.5
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 1.2e-12 76.3 52 71.2
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 7.6e-12 73.6 63 63.5
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 4.1e-10 67.8 45 73.3
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 4.1e-10 67.8 44 77.3
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 9.2e-10 66.6 49 69.4
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 1.2e-09 66.2 45 71.1
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.6e-09 65.9 45 73.3
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 1.6e-09 65.9 45 75.6
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 6.0e-09 63.9 44 70.5
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.3e-08 62.8 57 63.2
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.1e-08 60.8 43 69.8
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 5.1e-08 60.8 43 69.8
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 8.7e-08 60.1 37 78.4
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 1.9e-07 58.9 62 61.3


User provided reference genes

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