Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1242 Ceratophyllum demersum HOM05D002011 ORTHO05D001948 6.5e-91 337.4 175 100.0
CDE02G0396 Ceratophyllum demersum HOM05D002011 ORTHO05D001948 3.8e-67 258.5 163 84.0
Duzib187G1916 Durio zibethinus HOM05D002011 ORTHO05D001948 2.3e-11 73.2 158 37.3
MBI14_g15651_MAGBIO Magnolia biondii HOM05D002011 ORTHO05D001948 3.3e-10 69.3 162 37.7
Gohir.A07G030600 Gossypium hirsutum HOM05D002011 ORTHO05D001948 9.6e-10 67.8 96 41.7
Gohir.D07G034500 Gossypium hirsutum HOM05D002011 ORTHO05D001948 9.6e-10 67.8 96 41.7
Gorai.001G036200 Gossypium raimondii HOM05D002011 ORTHO05D001948 9.6e-10 67.8 96 41.7
Gohir.A05G057100 Gossypium hirsutum HOM05D002011 ORTHO05D001948 1.2e-09 67.4 96 40.6
Duzib168G0584 Durio zibethinus HOM05D002011 ORTHO05D001948 2.4e-08 63.2 96 38.5
TAR383G0822 Trochodendron aralioides HOM05D002011 ORTHO05D001948 3.1e-08 62.8 101 45.5
Manes.16G126300 Manihot esculenta HOM05D002011 ORTHO05D001948 4.0e-08 62.4 159 34.0
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 4.0e-08 62.4 101 41.6
Aa31LG4G890 Aethionema arabicum HOM05D002011 ORTHO05D001948 8.9e-08 61.2 116 38.8
MSTRG.11167 Avicennia marina HOM05D002011 ORTHO05D001948 8.9e-08 61.2 157 35.7
TWI32G0803 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 8.9e-08 61.2 155 34.8
Psat7g258520 Pisum sativum HOM05D002011 ORTHO05D001948 1.2e-07 60.8 163 35.0
THA.LOC104818603 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 2.6e-07 59.7 164 34.8
Potri.006G259700 Populus trichocarpa HOM05D002011 ORTHO05D001948 5.8e-07 58.5 172 32.6
Rhsim02G0206600 Rhododendron simsii HOM05D002011 ORTHO05D001948 5.8e-07 58.5 151 36.4
Aa31LG11G4430 Aethionema arabicum HOM05D002011 ORTHO05D001948 7.6e-07 58.2 162 33.3
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 7.6e-07 58.2 155 35.5
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 9.9e-07 57.8 173 33.5
MSTRG.22780 Avicennia marina HOM05D002011 ORTHO05D001948 1.3e-06 57.4 161 35.4
CANSAT25G2050 Cannabis sativa HOM05D002011 ORTHO05D001948 1.3e-06 57.4 162 34.6
TAR626G1639 Trochodendron aralioides HOM05D002011 ORTHO05D001948 1.3e-06 57.4 159 37.7
THA.LOC104803849 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 1.7e-06 57.0 150 34.7
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 2.2e-06 56.6 75 44.0
Nn2g12257 Nelumbo nucifera HOM05D002011 ORTHO05D001948 2.2e-06 56.6 108 37.0
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 2.9e-06 56.2 156 32.1
Oeu010089.1 Olea europaea HOM05D002011 ORTHO05D001948 2.9e-06 56.2 152 34.9
Phvul.005G181100 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 2.9e-06 56.2 145 37.2
unitig_60.g25613 Utricularia gibba HOM05D002011 ORTHO05D001948 2.9e-06 56.2 151 35.1
Manes.03G011400 Manihot esculenta HOM05D002011 ORTHO05D001948 3.8e-06 55.8 162 33.3
BraA01t00593Z Brassica rapa HOM05D002011 ORTHO05D001948 4.9e-06 55.5 153 36.6
FAN24G0280 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.9e-06 55.5 171 33.3
PSO782G4733 Papaver somniferum HOM05D002011 ORTHO05D001948 4.9e-06 55.5 175 33.7
Prupe.1G486600 Prunus persica HOM05D002011 ORTHO05D001948 4.9e-06 55.5 168 34.5
RcHm_v2.0_Chr6g0297181 Rosa chinensis HOM05D002011 ORTHO05D001948 4.9e-06 55.5 175 34.3
TAR636G1642 Trochodendron aralioides HOM05D002011 ORTHO05D001948 4.9e-06 55.5 160 38.1
Carub.0001s1559 Capsella rubella HOM05D002011 ORTHO05D001948 6.4e-06 55.1 172 32.0
CARHR116290 Cardamine hirsuta HOM05D002011 ORTHO05D001948 6.4e-06 55.1 158 34.8
Cpa.g.sc127.2 Carica papaya HOM05D002011 ORTHO05D001948 6.4e-06 55.1 102 41.2
CiPaw.01G252000 Carya illinoinensis HOM05D002011 ORTHO05D001948 6.4e-06 55.1 177 33.9
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 6.4e-06 55.1 158 36.1
FAN20G1038 Fragaria x ananassa HOM05D002011 ORTHO05D001948 6.4e-06 55.1 175 34.3
Sp4g04360 Schrenkiella parvula HOM05D002011 ORTHO05D001948 6.4e-06 55.1 168 34.5
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 8.4e-06 54.7 148 33.8


User provided reference genes

Program Settings