Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 6.0e-61 237.3 115 100.0
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 4.6e-45 184.5 111 75.7
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 3.9e-44 181.4 112 75.0
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 3.9e-44 181.4 111 74.8
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 8.7e-44 180.3 115 73.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 5.6e-43 177.6 115 71.3
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 5.6e-43 177.6 115 71.3
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 5.6e-43 177.6 114 71.9
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 2.8e-42 175.3 111 72.1
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.8e-42 174.5 115 72.2
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 8.1e-42 173.7 113 70.8
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 8.1e-42 173.7 109 74.3
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.4e-41 172.9 115 69.6
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.8e-41 172.6 114 68.4
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 2.4e-41 172.2 115 68.7
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.4e-41 172.2 107 72.9
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 4.0e-41 171.4 113 69.9
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 6.9e-41 170.6 103 73.8
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 6.9e-41 170.6 114 67.5
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 6.9e-41 170.6 113 68.1
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 6.9e-41 170.6 99 75.8
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 9.0e-41 170.2 111 70.3
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 9.0e-41 170.2 113 69.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.2e-40 169.9 113 69.9
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.2e-40 169.9 111 70.3
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 2.0e-40 169.1 113 67.3
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.6e-40 168.7 113 67.3
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 3.4e-40 168.3 113 67.3
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 5.8e-40 167.5 114 66.7
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 5.8e-40 167.5 113 67.3
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 7.6e-40 167.2 98 76.5
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 9.9e-40 166.8 115 65.2
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.3e-39 166.4 113 65.5
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.7e-39 166.0 103 70.9
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 2.2e-39 165.6 105 73.3
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 2.2e-39 165.6 113 67.3
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.9e-39 165.2 114 64.0
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 3.8e-39 164.9 114 65.8
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 1.1e-38 163.3 112 63.4
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.4e-38 162.9 134 57.5
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.4e-38 162.9 126 63.5
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.9e-38 162.5 112 67.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 4.2e-38 161.4 104 69.2
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 4.2e-38 161.4 104 69.2
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 4.2e-38 161.4 104 69.2
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 5.5e-38 161.0 114 61.4
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 7.1e-38 160.6 115 66.1
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 7.1e-38 160.6 114 64.9
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 7.1e-38 160.6 112 62.5
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.2e-37 159.8 112 61.6
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.6e-37 159.5 100 75.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.6e-37 159.5 112 66.1
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.1e-37 159.1 114 61.4
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 2.1e-37 159.1 115 64.3
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.7e-37 158.7 112 62.5
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 7.9e-37 157.1 115 63.5
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.0e-36 156.8 100 74.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.0e-36 156.8 100 74.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.0e-36 156.8 100 70.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.3e-36 156.4 100 71.0
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.0e-36 155.2 100 71.0
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 3.9e-36 154.8 106 65.1
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 5.1e-36 154.5 99 71.7
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 6.7e-36 154.1 108 62.0
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.7e-36 154.1 131 59.5
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 6.7e-36 154.1 100 68.0
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 8.7e-36 153.7 101 69.3
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 8.7e-36 153.7 100 68.0
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.1e-35 153.3 100 70.0
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.5e-35 152.9 126 58.7
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.5e-35 152.9 110 60.9
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.9e-35 152.5 98 68.4
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 3.3e-35 151.8 100 71.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 4.3e-35 151.4 99 67.7
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.6e-35 151.0 86 74.4
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 9.6e-35 150.2 95 71.6
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.6e-34 149.4 116 62.1
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.1e-34 149.1 107 63.6
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 2.1e-34 149.1 106 67.0
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 2.8e-34 148.7 100 67.0
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 8.1e-34 147.1 112 59.8
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 8.1e-34 147.1 112 59.8
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.4e-33 146.4 112 59.8
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.4e-33 146.4 112 59.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.4e-33 145.6 112 58.9
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 2.4e-33 145.6 126 56.3
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 3.1e-33 145.2 100 68.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.1e-33 145.2 96 69.8
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 2.6e-32 142.1 100 65.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 5.8e-32 141.0 96 67.7
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 5.8e-32 141.0 86 69.8
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 7.6e-32 140.6 100 67.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 2.2e-31 139.0 96 62.5
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 8.4e-31 137.1 106 57.5
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 8.4e-31 137.1 96 63.5
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.1e-30 136.7 100 63.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.4e-30 136.3 87 71.3
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.5e-30 135.6 100 59.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.2e-30 135.2 100 59.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.2e-29 133.3 100 61.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 1.6e-29 132.9 85 71.8
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-29 132.9 108 59.3
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 1.6e-29 132.9 100 60.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 2.1e-29 132.5 104 56.7
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 3.5e-29 131.7 100 59.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 4.6e-29 131.3 99 61.6
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.0e-29 131.0 109 58.7
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.0e-29 131.0 103 57.3
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 3.9e-28 128.3 81 72.8
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 6.7e-28 127.5 88 64.8
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 2.5e-27 125.6 100 58.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 5.7e-27 124.4 93 61.3
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 7.4e-27 124.0 100 58.0
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.1e-26 122.5 93 61.3
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 2.8e-26 122.1 100 56.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.2e-26 120.6 88 62.5
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 3.1e-25 118.6 85 63.5
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.4e-24 115.2 106 52.8
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 1.7e-23 112.8 99 53.5
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 8.4e-23 110.5 68 82.4
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 2.7e-21 105.5 75 62.7
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.0e-20 103.6 75 62.7
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 3.0e-20 102.1 66 65.2
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 8.7e-20 100.5 69 66.7
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 2.5e-19 99.0 61 67.2
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 1.3e-15 86.7 71 54.9
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.5e-15 84.3 52 73.1
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 2.8e-10 68.9 105 40.0
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.3e-09 64.7 66 48.5
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.5e-08 63.2 61 52.5
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 5.0e-07 58.2 34 73.5


User provided reference genes

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