Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-62 242.7 115 100.0
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 8.7e-36 153.7 92 78.3
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 8.7e-36 153.7 99 71.7
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 2.5e-35 152.1 126 62.7
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 3.3e-35 151.8 92 76.1
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.6e-34 149.4 93 71.0
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.6e-34 149.4 93 74.2
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.1e-34 149.1 96 75.0
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 2.1e-34 149.1 91 74.7
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 4.8e-34 147.9 102 67.6
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 4.8e-34 147.9 92 75.0
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 4.8e-34 147.9 96 74.0
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 1.1e-33 146.7 91 72.5
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 1.1e-33 146.7 96 74.0
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.1e-33 146.7 96 75.0
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 2.4e-33 145.6 110 62.7
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 2.4e-33 145.6 110 62.7
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 3.1e-33 145.2 91 74.7
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.1e-33 145.2 99 70.7
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 3.1e-33 145.2 90 76.7
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 3.1e-33 145.2 90 76.7
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 4.0e-33 144.8 90 75.6
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 5.3e-33 144.4 101 66.3
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 5.3e-33 144.4 92 69.6
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 6.9e-33 144.1 108 63.9
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 6.9e-33 144.1 101 68.3
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.5e-32 142.9 101 67.3
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 2.0e-32 142.5 108 63.9
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.0e-32 142.5 101 64.4
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.6e-32 142.1 91 71.4
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.6e-32 142.1 97 67.0
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.6e-32 142.1 97 67.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 3.4e-32 141.7 91 70.3
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 4.5e-32 141.4 93 69.9
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 4.5e-32 141.4 90 75.6
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 5.8e-32 141.0 104 62.5
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.6e-32 140.6 93 68.8
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 7.6e-32 140.6 101 65.3
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-31 139.8 93 68.8
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.3e-31 139.8 108 64.8
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.7e-31 139.4 109 58.7
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.7e-31 139.4 91 70.3
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 1.7e-31 139.4 90 71.1
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 1.7e-31 139.4 90 73.3
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.2e-31 139.0 91 71.4
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 2.2e-31 139.0 87 74.7
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.9e-31 137.9 96 66.7
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 8.4e-31 137.1 91 69.2
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 8.4e-31 137.1 104 65.4
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.4e-31 137.1 106 60.4
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 8.4e-31 137.1 90 71.1
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 8.4e-31 137.1 91 69.2
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 1.4e-30 136.3 99 63.6
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.9e-30 136.0 93 68.8
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 1.9e-30 136.0 113 60.2
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.9e-30 136.0 108 58.3
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.9e-30 136.0 108 58.3
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.9e-30 136.0 99 63.6
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 2.5e-30 135.6 87 71.3
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 4.2e-30 134.8 91 68.1
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 4.2e-30 134.8 91 69.2
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 7.1e-30 134.0 91 69.2
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 7.1e-30 134.0 90 66.7
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 9.3e-30 133.7 90 68.9
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 9.3e-30 133.7 90 70.0
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.6e-29 132.9 93 66.7
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 1.6e-29 132.9 90 70.0
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 3.5e-29 131.7 85 72.9
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 3.5e-29 131.7 106 60.4
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 4.6e-29 131.3 91 67.0
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 6.0e-29 131.0 91 67.0
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 6.0e-29 131.0 87 71.3
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.3e-28 129.8 90 64.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.3e-28 129.0 91 64.8
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 2.3e-28 129.0 91 64.8
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 2.3e-28 129.0 93 63.4
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.9e-28 128.3 87 67.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 5.1e-28 127.9 91 63.7
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 5.1e-28 127.9 91 63.7
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 8.7e-28 127.1 91 62.6
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.1e-27 126.7 90 65.6
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 2.5e-27 125.6 91 62.6
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 3.3e-27 125.2 93 62.4
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 7.4e-27 124.0 91 62.6
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 9.6e-27 123.6 91 62.6
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.3e-26 123.2 79 70.9
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 4.8e-26 121.3 79 68.4
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.8e-26 121.3 89 61.8
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 6.3e-26 120.9 90 61.1
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 6.3e-26 120.9 111 54.1
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 8.2e-26 120.6 94 59.6
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.8e-25 119.4 90 64.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.8e-25 119.4 87 60.9
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 2.6e-24 115.5 68 73.5
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 2.6e-24 115.5 68 73.5
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 2.6e-24 115.5 107 52.3
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 5.9e-24 114.4 79 68.4
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 7.6e-24 114.0 84 60.7
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.9e-22 109.4 105 54.3
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.9e-22 109.4 79 62.0
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 4.2e-22 108.2 102 52.9
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 4.2e-22 108.2 69 72.5
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.6e-21 106.3 93 52.7
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.6e-21 106.3 79 64.6
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.6e-21 106.3 81 61.7
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.6e-21 104.8 92 56.5
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 7.9e-21 104.0 73 65.8
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 3.9e-20 101.7 86 57.0
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.5e-19 99.8 70 65.7
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 5.7e-19 97.8 92 51.1
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.5e-16 89.7 102 49.0
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.7e-15 86.3 88 46.6
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 9.4e-14 80.5 41 92.7
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.0e-11 72.8 92 39.1
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 6.5e-07 57.8 54 51.9
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-06 57.0 49 57.1
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.5e-06 54.7 40 55.0
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.5e-06 54.7 40 55.0


User provided reference genes

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