Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 6.9e-86 320.5 147 100.0
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.0e-52 210.3 108 81.5
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 3.8e-52 208.4 124 72.6
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 3.8e-52 208.4 111 78.4
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 5.0e-52 208.0 116 76.7
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.4e-51 206.5 105 81.9
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.4e-51 206.5 145 64.1
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.4e-51 206.5 113 76.1
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 1.9e-51 206.1 122 72.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 2.5e-51 205.7 132 67.4
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 2.5e-51 205.7 105 81.9
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.5e-51 205.7 137 65.7
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 5.5e-51 204.5 105 81.9
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 5.5e-51 204.5 104 81.7
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 9.4e-51 203.8 123 70.7
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 9.4e-51 203.8 132 66.7
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 9.4e-51 203.8 110 76.4
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.2e-50 203.4 113 76.1
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 2.1e-50 202.6 104 80.8
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.7e-50 202.2 120 73.3
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 4.7e-50 201.4 131 65.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 4.7e-50 201.4 145 63.4
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 6.1e-50 201.1 131 65.6
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 6.1e-50 201.1 105 80.0
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.0e-49 200.3 125 68.0
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 1.0e-49 200.3 119 67.2
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 1.4e-49 199.9 104 79.8
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 3.0e-49 198.7 105 78.1
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 3.0e-49 198.7 111 74.8
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 3.9e-49 198.4 113 74.3
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 3.9e-49 198.4 105 78.1
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 8.8e-49 197.2 120 70.8
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.1e-48 196.8 105 76.2
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.1e-48 196.8 104 78.8
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 1.1e-48 196.8 140 64.3
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.5e-48 196.4 114 71.9
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 1.5e-48 196.4 145 61.4
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 2.0e-48 196.1 126 67.5
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 2.6e-48 195.7 106 78.3
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 2.6e-48 195.7 119 68.1
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.3e-48 195.3 106 78.3
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 4.4e-48 194.9 140 62.1
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 5.7e-48 194.5 106 77.4
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 7.4e-48 194.1 104 76.9
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 9.7e-48 193.7 139 61.2
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 1.3e-47 193.4 105 76.2
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 1.7e-47 193.0 104 76.9
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 3.7e-47 191.8 104 76.0
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 4.8e-47 191.4 109 73.4
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 6.3e-47 191.0 118 67.8
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 1.1e-46 190.3 129 62.0
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 1.4e-46 189.9 119 67.2
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 2.4e-46 189.1 118 68.6
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 5.3e-46 188.0 104 75.0
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 1.2e-45 186.8 112 71.4
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 1.3e-44 183.3 112 67.9
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.2e-44 182.6 104 75.0
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 7.2e-43 177.6 91 80.2
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 2.1e-42 176.0 171 49.1
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.4e-41 173.3 104 67.3
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.3e-39 164.5 101 71.3
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 3.1e-38 162.2 104 66.3
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 4.1e-38 161.8 88 76.1
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 3.5e-37 158.7 110 59.1
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 2.1e-34 149.4 76 80.3
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 8.0e-34 147.5 77 77.9
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 4.4e-32 141.7 77 75.3
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 5.7e-32 141.4 92 69.6
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 1.8e-30 136.3 94 59.6
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 3.1e-30 135.6 94 58.5
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.6e-21 106.7 63 69.8
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.7e-15 86.7 51 64.7
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 2.4e-06 56.2 29 72.4


User provided reference genes

Program Settings