Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1120 Ceratophyllum demersum HOM05D003176 ORTHO05D018830 1.5e-59 232.6 115 100.0
Duzib150G0644 Durio zibethinus HOM05D003176 ORTHO05D004011 7.2e-22 107.5 77 71.4
Actinidia01281 Actinidia chinensis HOM05D003176 ORTHO05D004011 1.6e-21 106.3 92 59.8
GSVIVG01010868001 Vitis vinifera HOM05D003176 ORTHO05D004011 1.6e-21 106.3 90 62.2
Lalb_Chr23g0276801 Lupinus albus HOM05D003176 ORTHO05D004011 2.1e-21 105.9 78 64.1
Atru.chr7.764 Acer truncatum HOM05D003176 ORTHO05D004011 3.5e-21 105.1 76 68.4
Atru.chr7.784 Acer truncatum HOM05D003176 ORTHO05D004011 3.5e-21 105.1 76 68.4
Medtr4g127450 Medicago truncatula HOM05D003176 ORTHO05D004011 7.9e-21 104.0 94 57.4
Aqoxy7G02785 Aquilegia oxysepala HOM05D003176 ORTHO05D004011 1.0e-20 103.6 94 57.4
Migut.J00803 Erythranthe guttata HOM05D003176 ORTHO05D004011 1.3e-20 103.2 71 73.2
CSS0006331 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D004011 2.3e-20 102.4 69 72.5
CiPaw.07G196500 Carya illinoinensis HOM05D003176 ORTHO05D004011 2.3e-20 102.4 95 58.9
ECA234G0289 Erigeron canadensis HOM05D003176 ORTHO05D004011 2.3e-20 102.4 72 69.4
Lj5A672T28 Lonicera japonica HOM05D003176 ORTHO05D004011 2.3e-20 102.4 71 71.8
Haze_22014 Corylus avellana HOM05D003176 ORTHO05D004011 3.0e-20 102.1 71 73.2
Glyma.15G165500 Glycine max HOM05D003176 ORTHO05D004011 3.0e-20 102.1 81 63.0
Sc08g0004700 Simmondsia chinensis HOM05D003176 ORTHO05D004011 3.0e-20 102.1 76 67.1
Cpa.g.c27842.3 Carica papaya HOM05D003176 ORTHO05D004011 3.9e-20 101.7 71 69.0
Glyma.09G059200 Glycine max HOM05D003176 ORTHO05D004011 3.9e-20 101.7 76 65.8
AUR62021345 Chenopodium quinoa HOM05D003176 ORTHO05D004011 5.1e-20 101.3 83 65.1
Dinv25436 Davidia involucrata HOM05D003176 ORTHO05D004011 6.7e-20 100.9 70 74.3
Gohir.D13G213200 Gossypium hirsutum HOM05D003176 ORTHO05D004011 6.7e-20 100.9 70 72.9
Gorai.013G243500 Gossypium raimondii HOM05D003176 ORTHO05D004011 6.7e-20 100.9 70 72.9
Manes.06G020300 Manihot esculenta HOM05D003176 ORTHO05D004011 6.7e-20 100.9 100 57.0
PSO063G3607 Papaver somniferum HOM05D003176 ORTHO05D004011 6.7e-20 100.9 77 66.2
PSO170G4191 Papaver somniferum HOM05D003176 ORTHO05D004011 6.7e-20 100.9 77 66.2
arahy.Tifrunner.gnm1.ann1.06L84B Arachis hypogaea HOM05D003176 ORTHO05D004011 8.7e-20 100.5 87 57.5
BcaB08g36083 Brassica carinata HOM05D003176 ORTHO05D004011 8.7e-20 100.5 85 63.5
Glyma.17G059700 Glycine max HOM05D003176 ORTHO05D004011 8.7e-20 100.5 76 64.5
Thecc.09G185500 Theobroma cacao HOM05D003176 ORTHO05D004011 8.7e-20 100.5 81 66.7
BcaC04g19989 Brassica carinata HOM05D003176 ORTHO05D004011 1.1e-19 100.1 85 63.5
C09p49040 Brassica napus HOM05D003176 ORTHO05D004011 1.1e-19 100.1 85 63.5
BolC9t57755H Brassica oleracea HOM05D003176 ORTHO05D004011 1.1e-19 100.1 85 63.5
Duzib170G0992 Durio zibethinus HOM05D003176 ORTHO05D004011 1.1e-19 100.1 77 66.2
Thhalv10012758m.g Eutrema salsugineum HOM05D003176 ORTHO05D004011 1.1e-19 100.1 76 65.8
arahy.Tifrunner.gnm1.ann1.DF4URC Arachis hypogaea HOM05D003176 ORTHO05D004011 1.5e-19 99.8 88 59.1
COL.COLO4_08418 Corchorus olitorius HOM05D003176 ORTHO05D004011 1.5e-19 99.8 84 64.3
Gohir.A08G080400 Gossypium hirsutum HOM05D003176 ORTHO05D004011 1.5e-19 99.8 70 71.4
Gorai.004G095300 Gossypium raimondii HOM05D003176 ORTHO05D004011 1.5e-19 99.8 70 71.4
A10p14610 Brassica napus HOM05D003176 ORTHO05D004011 1.9e-19 99.4 78 66.7
BraA10t43547Z Brassica rapa HOM05D003176 ORTHO05D004011 1.9e-19 99.4 78 66.7
Duzib168G1099 Durio zibethinus HOM05D003176 ORTHO05D004011 1.9e-19 99.4 78 69.2
SGA_v2.0_scaffold491G52431 Striga asiatica HOM05D003176 ORTHO05D004011 1.9e-19 99.4 71 70.4
TWI32G0804 Tripterygium wilfordii HOM05D003176 ORTHO05D004011 1.9e-19 99.4 75 68.0
unitig_22.g5163 Utricularia gibba HOM05D003176 ORTHO05D004011 1.9e-19 99.4 71 69.0
AT5G57210 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 2.5e-19 99.0 76 64.5
EL10Ac8g18330 Beta vulgaris HOM05D003176 ORTHO05D004011 2.5e-19 99.0 85 61.2
CAN.G333.10 Capsicum annuum HOM05D003176 ORTHO05D004011 2.5e-19 99.0 71 69.0
Cc00_g10750 Coffea canephora HOM05D003176 ORTHO05D004011 2.5e-19 99.0 71 69.0
CsaV3_2G008700 Cucumis sativus L. HOM05D003176 ORTHO05D004011 2.5e-19 99.0 79 64.6
Rhsim01G0118100 Rhododendron simsii HOM05D003176 ORTHO05D004011 2.5e-19 99.0 73 67.1
ATR0626G188 Amborella trichopoda HOM05D003176 ORTHO05D004011 3.3e-19 98.6 77 66.2
Carub.0008s1772 Capsella rubella HOM05D003176 ORTHO05D004011 3.3e-19 98.6 78 65.4
AUR62033259 Chenopodium quinoa HOM05D003176 ORTHO05D004011 3.3e-19 98.6 82 64.6
QL02p046513 Quercus lobata HOM05D003176 ORTHO05D004011 3.3e-19 98.6 69 71.0
SGA_v2.0_scaffold31G12758 Striga asiatica HOM05D003176 ORTHO05D004011 3.3e-19 98.6 83 63.9
vmacro20819 Vaccinium macrocarpon HOM05D003176 ORTHO05D004011 3.3e-19 98.6 72 68.1
Aa31LG3G13110 Aethionema arabicum HOM05D003176 ORTHO05D004011 4.3e-19 98.2 77 63.6
Lalb_Chr08g0231881 Lupinus albus HOM05D003176 ORTHO05D004011 4.3e-19 98.2 72 62.5
Lalb_Chr11g0074831 Lupinus albus HOM05D003176 ORTHO05D004011 4.3e-19 98.2 79 62.0
Nn8g40842 Nelumbo nucifera HOM05D003176 ORTHO05D004011 4.3e-19 98.2 80 62.5
Sp6g18940 Schrenkiella parvula HOM05D003176 ORTHO05D004011 4.3e-19 98.2 78 65.4
TAR625G0715 Trochodendron aralioides HOM05D003176 ORTHO05D004011 4.3e-19 98.2 85 58.8
MSTRG.26541 Avicennia marina HOM05D003176 ORTHO05D004011 5.7e-19 97.8 81 61.7
CARHR271000 Cardamine hirsuta HOM05D003176 ORTHO05D004011 5.7e-19 97.8 78 65.4
Dinv41170 Davidia involucrata HOM05D003176 ORTHO05D004011 5.7e-19 97.8 70 74.3
Migut.L01886 Erythranthe guttata HOM05D003176 ORTHO05D004011 5.7e-19 97.8 72 68.1
SGA_v2.0_scaffold231G43412 Striga asiatica HOM05D003176 ORTHO05D004011 5.7e-19 97.8 71 67.6
AL161U10040 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 7.4e-19 97.4 78 65.4
AL8G33180 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 7.4e-19 97.4 78 65.4
Gohir.D08G090300 Gossypium hirsutum HOM05D003176 ORTHO05D004011 7.4e-19 97.4 70 70.0
MBI13_g01740_MAGBIO Magnolia biondii HOM05D003176 ORTHO05D004011 7.4e-19 97.4 83 66.3
TWI63G0043 Tripterygium wilfordii HOM05D003176 ORTHO05D004011 7.4e-19 97.4 71 69.0
Ca_21252_v3 Cicer arietinum L. HOM05D003176 ORTHO05D004011 9.7e-19 97.1 93 55.9
HanXRQChr12g0358501 Helianthus annuus HOM05D003176 ORTHO05D004011 9.7e-19 97.1 80 65.0
PGSC0003DMG400023179 Solanum tuberosum HOM05D003176 ORTHO05D004011 9.7e-19 97.1 71 69.0
PGSC0003DMG400028746 Solanum tuberosum HOM05D003176 ORTHO05D004011 9.7e-19 97.1 81 61.7
THA.LOC104817780 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 9.7e-19 97.1 98 54.1
arahy.Tifrunner.gnm1.ann1.LHRZ75 Arachis hypogaea HOM05D003176 ORTHO05D004011 1.3e-18 96.7 71 66.2
MELO3C003977.2 Cucumis melo HOM05D003176 ORTHO05D004011 1.3e-18 96.7 79 63.3
HanXRQChr10g0308831 Helianthus annuus HOM05D003176 ORTHO05D004011 1.3e-18 96.7 70 68.6
Nitab4.5_0003468g0010 Nicotiana tabacum HOM05D003176 ORTHO05D004011 1.3e-18 96.7 87 58.6
Solyc07g008840.3 Solanum lycopersicum HOM05D003176 ORTHO05D004011 1.3e-18 96.7 78 62.8
Sopen07g004770 Solanum pennellii HOM05D003176 ORTHO05D004011 1.3e-18 96.7 78 62.8
Ca_02099_v3 Cicer arietinum L. HOM05D003176 ORTHO05D004011 1.6e-18 96.3 77 61.0
Sed0012562 Sechium edule HOM05D003176 ORTHO05D004011 1.6e-18 96.3 71 67.6
VMungo1215G3277 Vigna mungo HOM05D003176 ORTHO05D004011 1.6e-18 96.3 74 64.9
CDE02G1474 Ceratophyllum demersum HOM05D003176 ORTHO05D004011 2.2e-18 95.9 69 65.2
Psat4g013240 Pisum sativum HOM05D003176 ORTHO05D004011 2.2e-18 95.9 73 65.8
PGR044G1774 Punica granatum HOM05D003176 ORTHO05D004011 2.2e-18 95.9 71 66.2
Oeu064554.1 Olea europaea HOM05D003176 ORTHO05D004011 2.8e-18 95.5 76 64.5
Sopen02g003110 Solanum pennellii HOM05D003176 ORTHO05D004011 2.8e-18 95.5 71 69.0
ClCG11G011790 Citrullus lanatus HOM05D003176 ORTHO05D004011 3.7e-18 95.1 71 66.2
Os08g0518100 Oryza sativa ssp. japonica HOM05D003176 ORTHO05D004011 3.7e-18 95.1 71 63.4
SalBow5G0408 Salvia bowleyana HOM05D003176 ORTHO05D004011 3.7e-18 95.1 71 67.6
THA.LOC104820008 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 3.7e-18 95.1 74 62.2
arahy.Tifrunner.gnm1.ann1.LRN56Y Arachis hypogaea HOM05D003176 ORTHO05D004011 4.8e-18 94.7 71 64.8
Eucgr.C00121 Eucalyptus grandis HOM05D003176 ORTHO05D004011 4.8e-18 94.7 71 64.8
MBI16_g05838_MAGBIO Magnolia biondii HOM05D003176 ORTHO05D004011 4.8e-18 94.7 74 64.9
Phvul.003G141700 Phaseolus vulgaris HOM05D003176 ORTHO05D004011 4.8e-18 94.7 74 63.5
Prupe.1G076400 Prunus persica HOM05D003176 ORTHO05D004011 4.8e-18 94.7 71 69.0
SalBow3G1319 Salvia bowleyana HOM05D003176 ORTHO05D004011 4.8e-18 94.7 86 60.5
Ciclev10007458m.g Citrus clementina HOM05D003176 ORTHO05D004011 6.3e-18 94.4 85 60.0
RcHm_v2.0_Chr4g0399721 Rosa chinensis HOM05D003176 ORTHO05D004011 6.3e-18 94.4 90 57.8
CiPaw.08G033000 Carya illinoinensis HOM05D003176 ORTHO05D004011 8.2e-18 94.0 75 62.7
FAN17G1758 Fragaria x ananassa HOM05D003176 ORTHO05D004011 8.2e-18 94.0 93 53.8
MD16G1249600 Malus domestica HOM05D003176 ORTHO05D004011 8.2e-18 94.0 75 65.3
Peaxi162Scf01600g00024 Petunia axillaris HOM05D003176 ORTHO05D004011 8.2e-18 94.0 82 61.0
Phvul.009G236600 Phaseolus vulgaris HOM05D003176 ORTHO05D004011 8.2e-18 94.0 81 56.8
Sabra06G0056800 Salix brachista HOM05D003176 ORTHO05D004011 8.2e-18 94.0 71 66.2
Sed0013378 Sechium edule HOM05D003176 ORTHO05D004011 8.2e-18 94.0 71 66.2
Actinidia02504 Actinidia chinensis HOM05D003176 ORTHO05D004011 1.1e-17 93.6 93 57.0
CDE06G0860 Ceratophyllum demersum HOM05D003176 ORTHO05D004011 1.1e-17 93.6 69 63.8
MD13G1242400 Malus domestica HOM05D003176 ORTHO05D004011 1.1e-17 93.6 71 67.6
Potri.006G076000 Populus trichocarpa HOM05D003176 ORTHO05D004011 1.1e-17 93.6 86 58.1
Sabra18G0116900 Salix brachista HOM05D003176 ORTHO05D004011 1.1e-17 93.6 73 65.8
Zm00001eb035750 Zea mays HOM05D003176 ORTHO05D004011 1.1e-17 93.6 71 62.0
Cfa013447 Carpinus fangiana HOM05D003176 ORTHO05D004011 1.4e-17 93.2 71 67.6
Lj6g0011356 Lotus japonicus HOM05D003176 ORTHO05D004011 1.4e-17 93.2 77 61.0
AT2G19240 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 1.8e-17 92.8 77 57.1
FvH4_4g07350 Fragaria vesca HOM05D003176 ORTHO05D004011 1.8e-17 92.8 72 63.9
FAN07G0459 Fragaria x ananassa HOM05D003176 ORTHO05D004011 1.8e-17 92.8 72 63.9
FAN12G1948 Fragaria x ananassa HOM05D003176 ORTHO05D004011 1.8e-17 92.8 72 63.9
FAN22G0108 Fragaria x ananassa HOM05D003176 ORTHO05D004011 1.8e-17 92.8 72 63.9
A01p08150 Brassica napus HOM05D003176 ORTHO05D004011 2.4e-17 92.4 82 54.9
CANSAT11G0358 Cannabis sativa HOM05D003176 ORTHO05D004011 2.4e-17 92.4 73 64.4
Potri.018G143100 Populus trichocarpa HOM05D003176 ORTHO05D004011 2.4e-17 92.4 73 64.4
THA.LOC104814653 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 2.4e-17 92.4 74 60.8
Medtr2g037930 Medicago truncatula HOM05D003176 ORTHO05D004011 3.1e-17 92.0 77 59.7
Solyc02g014450.3 Solanum lycopersicum HOM05D003176 ORTHO05D004011 3.1e-17 92.0 71 67.6
TPR.G7915 Trifolium pratense HOM05D003176 ORTHO05D004011 3.1e-17 92.0 76 63.2
VMungo1309G1566 Vigna mungo HOM05D003176 ORTHO05D004011 3.1e-17 92.0 77 58.4
Ah.14g083560 Amaranthus hybridus HOM05D003176 ORTHO05D004011 4.1e-17 91.7 78 64.1
AL7G22290 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 5.3e-17 91.3 74 59.5
Carub.0007s1069 Capsella rubella HOM05D003176 ORTHO05D004011 6.9e-17 90.9 74 59.5
Oeu006849.1 Olea europaea HOM05D003176 ORTHO05D004011 6.9e-17 90.9 68 70.6
Psat1g145440 Pisum sativum HOM05D003176 ORTHO05D004011 6.9e-17 90.9 77 61.0
Aa31LG8G16270 Aethionema arabicum HOM05D003176 ORTHO05D004011 9.0e-17 90.5 79 55.7
DCAR_019802 Daucus carota HOM05D003176 ORTHO05D004011 9.0e-17 90.5 89 55.1
Manes.14G157900 Manihot esculenta HOM05D003176 ORTHO05D004011 9.0e-17 90.5 71 63.4
Zm00001eb234230 Zea mays HOM05D003176 ORTHO05D018830 9.0e-17 90.5 71 60.6
AT4G29950 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 1.2e-16 90.1 74 58.1
Thhalv10024395m.g Eutrema salsugineum HOM05D003176 ORTHO05D004011 1.5e-16 89.7 77 54.5
TPR.G35076 Trifolium pratense HOM05D003176 ORTHO05D004011 1.5e-16 89.7 78 57.7
PGR142G3732 Punica granatum HOM05D003176 ORTHO05D004011 2.0e-16 89.4 71 62.0
Sp3g32610 Schrenkiella parvula HOM05D003176 ORTHO05D004011 2.0e-16 89.4 74 58.1
Aa31LG2G20600 Aethionema arabicum HOM05D003176 ORTHO05D004011 2.6e-16 89.0 78 56.4
Carub.0003s3347 Capsella rubella HOM05D003176 ORTHO05D004011 3.4e-16 88.6 80 55.0
CARHR237870 Cardamine hirsuta HOM05D003176 ORTHO05D004011 4.5e-16 88.2 74 55.4
C01p09120 Brassica napus HOM05D003176 ORTHO05D004011 5.9e-16 87.8 82 53.7
BolC1t00903H Brassica oleracea HOM05D003176 ORTHO05D004011 5.9e-16 87.8 82 53.7
BraA01t00762Z Brassica rapa HOM05D003176 ORTHO05D004011 5.9e-16 87.8 82 53.7
HPP92_017388 Vanilla planifolia HOM05D003176 ORTHO05D004011 5.9e-16 87.8 71 59.2
ECA240G0293 Erigeron canadensis HOM05D003176 ORTHO05D004011 7.7e-16 87.4 67 59.7
Lsat_1_v5_gn_7_56381 Lactuca sativa HOM05D003176 ORTHO05D004011 7.7e-16 87.4 67 65.7
Hund26313 Selenicereus undatus HOM05D001165 ORTHO05D018830 7.7e-16 87.4 82 54.9
Zm00001eb389150 Zea mays HOM05D003176 ORTHO05D004011 7.7e-16 87.4 78 52.6
Lalb_Chr07g0180631 Lupinus albus HOM05D003176 ORTHO05D004011 1.7e-15 86.3 73 58.9
Sp7g27760 Schrenkiella parvula HOM05D003176 ORTHO05D004011 1.7e-15 86.3 77 54.5
Lj4g0019846 Lotus japonicus HOM05D003176 ORTHO05D004011 2.2e-15 85.9 82 54.9
Oeu044676.1 Olea europaea HOM05D003176 ORTHO05D004011 2.2e-15 85.9 117 46.2
Oeu044677.1 Olea europaea HOM05D003176 ORTHO05D004011 2.2e-15 85.9 117 46.2
Hund09057 Selenicereus undatus HOM05D003176 ORTHO05D004011 6.5e-15 84.3 73 60.3
SEGI_22652 Sequoiadendron giganteum HOM05D003176 ORTHO05D004011 6.5e-15 84.3 67 62.7
Lalb_Chr12g0199591 Lupinus albus HOM05D003176 ORTHO05D004011 1.4e-14 83.2 73 60.3
HPP92_010793 Vanilla planifolia HOM05D003176 ORTHO05D004011 2.5e-14 82.4 79 55.7
AagrBONN_evm.TU.Sc2ySwM_228.3481 Anthoceros agrestis HOM05D003176 ORTHO05D004011 3.2e-14 82.0 67 64.2
HanXRQChr03g0068441 Helianthus annuus HOM05D003176 ORTHO05D004011 3.2e-14 82.0 67 59.7
HPP92_017123 Vanilla planifolia HOM05D003176 ORTHO05D004011 5.5e-14 81.3 73 53.4
Os06g0661700 Oryza sativa ssp. japonica HOM05D003176 ORTHO05D004011 7.2e-14 80.9 76 51.3
Mapoly0002s0075 Marchantia polymorpha HOM05D003176 ORTHO05D004011 3.6e-13 78.6 67 58.2
Lalb_Chr08g0231781 Lupinus albus HOM05D003176 ORTHO05D004011 1.4e-12 76.6 56 64.3
SMO364G0786 Selaginella moellendorffii HOM05D003176 ORTHO05D004011 2.0e-11 72.8 67 55.2
TAR625G1482 Trochodendron aralioides HOM05D000001 ORTHO05D009971 3.3e-11 72.0 58 62.1
Peaxi162Scf00124g00614 Petunia axillaris HOM05D003176 ORTHO05D004011 6.3e-10 67.8 75 53.3
CARHR109700 Cardamine hirsuta HOM05D003176 ORTHO05D004011 1.3e-07 60.1 59 50.8
CSS0002588 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D018830 2.2e-07 59.3 62 58.1
CSS0022445 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D018830 2.2e-07 59.3 62 58.1


User provided reference genes

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