Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1112 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.6e-89 332.8 171 100.0
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 8.3e-83 310.5 171 93.6
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 3.4e-68 261.9 171 76.6
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 2.4e-66 255.8 171 73.1
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 3.2e-66 255.4 169 73.4
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 7.0e-66 254.2 169 72.8
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 7.0e-66 254.2 169 73.4
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 1.6e-65 253.1 169 73.4
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.6e-65 253.1 169 73.4
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 3.5e-65 251.9 171 71.9
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 3.5e-65 251.9 171 72.5
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 3.5e-65 251.9 171 73.7
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 3.5e-65 251.9 168 72.6
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 4.6e-65 251.5 169 72.8
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 4.6e-65 251.5 169 72.2
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 3.9e-64 248.4 169 69.2
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 5.0e-64 248.1 169 72.2
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 5.0e-64 248.1 166 71.7
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 6.6e-64 247.7 166 71.7
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 6.6e-64 247.7 169 69.2
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 6.6e-64 247.7 171 70.8
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 1.1e-63 246.9 166 71.1
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 1.5e-63 246.5 168 70.2
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 1.5e-63 246.5 171 70.2
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 1.9e-63 246.1 169 70.4
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 3.3e-63 245.4 171 69.0
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 4.3e-63 245.0 171 70.8
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 5.6e-63 244.6 166 71.1
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 7.3e-63 244.2 166 71.1
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 7.3e-63 244.2 171 67.8
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 7.3e-63 244.2 171 69.6
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 1.6e-62 243.0 171 69.0
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 1.6e-62 243.0 168 70.2
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 2.1e-62 242.7 169 70.4
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 2.1e-62 242.7 168 71.4
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 2.1e-62 242.7 169 68.6
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 2.8e-62 242.3 171 67.8
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 3.6e-62 241.9 168 70.8
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 3.6e-62 241.9 168 69.0
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 3.6e-62 241.9 168 69.6
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.6e-62 241.9 168 69.6
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 3.6e-62 241.9 171 68.4
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 4.7e-62 241.5 168 69.0
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 4.7e-62 241.5 169 69.8
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.7e-62 241.5 168 69.6
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 4.7e-62 241.5 171 69.6
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 6.2e-62 241.1 170 68.2
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 6.2e-62 241.1 171 69.0
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 6.2e-62 241.1 168 69.0
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 6.2e-62 241.1 169 67.5
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 8.0e-62 240.7 168 69.0
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 8.0e-62 240.7 171 68.4
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 8.0e-62 240.7 168 70.2
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 8.0e-62 240.7 169 69.2
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 8.0e-62 240.7 171 67.8
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 1.1e-61 240.4 169 69.2
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 1.1e-61 240.4 169 69.8
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 1.1e-61 240.4 166 69.3
Peaxi162Scf00337g00715 Petunia axillaris HOM05D003797 ORTHO05D004370 1.4e-61 240.0 166 69.9
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.4e-61 240.0 166 69.9
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 1.8e-61 239.6 168 69.0
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 1.8e-61 239.6 166 69.9
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 2.3e-61 239.2 171 66.7
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 2.3e-61 239.2 168 68.5
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.1e-61 238.8 170 67.6
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 3.1e-61 238.8 170 67.6
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 3.1e-61 238.8 168 68.5
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 3.1e-61 238.8 170 67.1
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 3.1e-61 238.8 170 67.6
Zm00001eb424350 Zea mays HOM05D003797 ORTHO05D004370 3.1e-61 238.8 165 70.3
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 4.0e-61 238.4 168 69.0
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 4.0e-61 238.4 169 67.5
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.0e-61 238.4 171 66.1
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 4.0e-61 238.4 171 66.1
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 4.0e-61 238.4 168 67.9
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 4.0e-61 238.4 166 70.5
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 4.0e-61 238.4 170 69.4
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 4.0e-61 238.4 170 68.2
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 4.0e-61 238.4 170 69.4
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 4.0e-61 238.4 171 67.8
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 5.2e-61 238.0 169 69.2
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 5.2e-61 238.0 169 69.2
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 5.2e-61 238.0 170 67.1
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 5.2e-61 238.0 171 67.3
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 5.2e-61 238.0 168 68.5
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 5.2e-61 238.0 170 68.2
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 6.8e-61 237.7 171 66.1
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 68.0
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 68.0
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 68.0
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 68.0
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 68.0
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 69.8
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 6.8e-61 237.7 169 67.5
HanXRQChr12g0383081 Helianthus annuus HOM05D003797 ORTHO05D004370 6.8e-61 237.7 171 68.4
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 8.9e-61 237.3 169 68.6
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 8.9e-61 237.3 168 68.5
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 8.9e-61 237.3 170 69.4
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 8.9e-61 237.3 170 65.9
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 1.2e-60 236.9 166 69.3
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 1.5e-60 236.5 171 66.7
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 1.5e-60 236.5 170 68.8
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 1.5e-60 236.5 168 67.3
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 1.5e-60 236.5 169 65.1
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 2.0e-60 236.1 169 68.6
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 2.0e-60 236.1 169 66.3
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.6e-60 235.7 170 67.1
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 3.4e-60 235.3 169 67.5
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 3.4e-60 235.3 169 65.7
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 4.4e-60 235.0 171 68.4
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 4.4e-60 235.0 188 62.8
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 4.4e-60 235.0 170 66.5
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 5.8e-60 234.6 169 67.5
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 5.8e-60 234.6 171 67.3
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 7.5e-60 234.2 171 67.3
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 9.8e-60 233.8 182 64.8
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 9.8e-60 233.8 166 67.5
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 9.8e-60 233.8 171 66.1
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 1.3e-59 233.4 169 68.0
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 1.7e-59 233.0 171 66.1
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 1.7e-59 233.0 171 65.5
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 1.7e-59 233.0 170 66.5
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 2.2e-59 232.6 171 64.9
A06p44090 Brassica napus HOM05D003797 ORTHO05D004370 2.9e-59 232.3 169 65.7
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 2.9e-59 232.3 168 67.9
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 2.9e-59 232.3 168 69.0
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 2.9e-59 232.3 166 66.3
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 3.7e-59 231.9 169 67.5
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 6.4e-59 231.1 168 65.5
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 6.4e-59 231.1 171 65.5
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 8.3e-59 230.7 169 66.9
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 8.3e-59 230.7 168 66.1
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 1.4e-58 229.9 169 66.3
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 1.9e-58 229.6 169 66.3
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 2.4e-58 229.2 169 65.1
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 2.4e-58 229.2 169 65.1
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 3.2e-58 228.8 171 64.9
MELO3C005259.2 Cucumis melo HOM05D003797 ORTHO05D004370 5.4e-58 228.0 164 67.7
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 5.4e-58 228.0 171 64.3
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 7.1e-58 227.6 166 66.3
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 1.2e-57 226.9 172 65.7
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 2.7e-57 225.7 171 65.5
HanXRQChr09g0251961 Helianthus annuus HOM05D003797 ORTHO05D004370 1.7e-56 223.0 166 67.5
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 8.6e-56 220.7 171 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 2.1e-54 216.1 168 64.9
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 2.1e-54 216.1 181 61.3
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 3.6e-54 215.3 170 61.8
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 3.1e-53 212.2 196 55.6
BcaB05g24664 Brassica carinata HOM05D003797 ORTHO05D004370 5.2e-53 211.5 165 63.0
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 6.8e-53 211.1 168 64.3
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 4.4e-52 208.4 171 61.4
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 5.8e-52 208.0 169 60.9
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 2.2e-51 206.1 168 61.3
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 8.3e-51 204.1 139 71.2
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 5.4e-50 201.4 166 65.1
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 3.3e-47 192.2 176 54.5
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 2.1e-46 189.5 169 56.2
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 6.2e-46 188.0 169 53.8
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 1.4e-45 186.8 169 55.0
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 3.1e-45 185.7 171 55.6
Haze_10851 Corylus avellana HOM05D003797 ORTHO05D004370 4.4e-44 181.8 135 65.2
Eucgr.L02831 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.3e-43 180.3 139 64.0
Sed0010431 Sechium edule HOM05D003797 ORTHO05D004370 2.1e-41 172.9 168 56.0
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 8.1e-38 161.0 143 54.5
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 4.0e-37 158.7 137 54.0
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 2.6e-36 156.0 169 49.7
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 1.7e-35 153.3 145 55.9
VMungo0251G2644 Vigna mungo HOM05D003797 ORTHO05D004370 8.1e-30 134.4 99 70.7
SEGI_29045 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 3.1e-29 132.5 99 65.7
Zm00001eb099160 Zea mays HOM05D003797 ORTHO05D004370 2.0e-28 129.8 101 61.4
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 2.7e-25 119.4 77 74.0
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 1.3e-24 117.1 72 72.2
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.5e-23 113.6 71 70.4
Nn4g24451 Nelumbo nucifera HOM05D003797 ORTHO05D004370 4.6e-17 92.0 76 61.8
unitig_52.g17091 Utricularia gibba HOM05D003797 ORTHO05D004370 4.8e-14 82.0 74 55.4
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 1.4e-10 70.5 167 28.1
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 3.5e-09 65.9 109 35.8
Cre02.g107550 Chlamydomonas reinhardtii HOM05D000981 ORTHO05D000845 6.1e-09 65.1 174 28.7
Pp3c20_1770 Physcomitrium patens HOM05D000981 ORTHO05D000845 1.3e-08 63.9 170 26.5
Cre02.g099500 Chlamydomonas reinhardtii HOM05D000981 ORTHO05D000845 6.7e-08 61.6 173 27.2
CBR_g31774 Chara braunii HOM05D000981 ORTHO05D000845 2.2e-06 56.6 170 26.5
Pp3c25_40 Physcomitrium patens HOM05D008009 ORTHO05D010177 3.7e-06 55.8 173 24.9
Thecc.06G045600 Theobroma cacao HOM05D003797 ORTHO05D004370 4.8e-06 55.5 57 40.4


User provided reference genes

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