Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1108 Ceratophyllum demersum HOM05D002586 ORTHO05D007521 1.8e-78 295.8 145 100.0
Nn7g36037 Nelumbo nucifera HOM05D002586 ORTHO05D007521 5.1e-49 198.0 123 74.8
RcHm_v2.0_Chr2g0091071 Rosa chinensis HOM05D002586 ORTHO05D007521 9.6e-48 193.7 122 76.2
Prupe.7G227000 Prunus persica HOM05D000417 ORTHO05D000342 3.6e-47 191.8 130 70.8
QL02p086119 Quercus lobata HOM05D002586 ORTHO05D007521 1.4e-46 189.9 120 74.2
CSS0041277 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 4.0e-46 188.3 120 72.5
Gorai.010G068800 Gossypium raimondii HOM05D000417 ORTHO05D000342 4.0e-46 188.3 129 71.3
MD02G1062400 Malus domestica HOM05D002586 ORTHO05D007521 4.0e-46 188.3 129 69.8
Lalb_Chr08g0235011 Lupinus albus HOM05D002586 ORTHO05D007521 5.2e-46 188.0 123 69.1
CiPaw.03G235200 Carya illinoinensis HOM05D002586 ORTHO05D007521 2.0e-45 186.0 120 71.7
Gohir.A06G060550 Gossypium hirsutum HOM05D000417 ORTHO05D007521 2.0e-45 186.0 129 70.5
Lalb_Chr21g0316611 Lupinus albus HOM05D002586 ORTHO05D007521 2.6e-45 185.7 132 65.9
PGR142G2078 Punica granatum HOM05D002586 ORTHO05D007521 3.4e-45 185.3 131 67.2
GSVIVG01015435001 Vitis vinifera HOM05D000417 ORTHO05D000342 3.4e-45 185.3 125 67.2
Duzib187G1530 Durio zibethinus HOM05D002586 ORTHO05D007521 5.8e-45 184.5 120 75.0
TPR.G26750 Trifolium pratense HOM05D002586 ORTHO05D007521 5.8e-45 184.5 121 69.4
Cfa003292 Carpinus fangiana HOM05D000417 ORTHO05D000342 9.9e-45 183.7 122 72.1
Hund26118 Selenicereus undatus HOM05D002586 ORTHO05D007521 9.9e-45 183.7 125 68.0
CsaV3_2G002470 Cucumis sativus L. HOM05D002586 ORTHO05D007521 3.8e-44 181.8 122 70.5
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 3.8e-44 181.8 120 70.8
CANSAT56G1449 Cannabis sativa HOM05D002586 ORTHO05D007521 8.4e-44 180.6 120 70.8
Gohir.D06G058900 Gossypium hirsutum HOM05D002586 ORTHO05D007521 8.4e-44 180.6 131 69.5
Thecc.09G114900 Theobroma cacao HOM05D002586 ORTHO05D007521 8.4e-44 180.6 120 72.5
Atru.chr7.1294 Acer truncatum HOM05D000417 ORTHO05D000342 1.4e-43 179.9 136 63.2
Dinv41576 Davidia involucrata HOM05D005850 ORTHO05D007405 7.1e-43 177.6 128 68.0
AL5G37440 Arabidopsis lyrata HOM05D002586 ORTHO05D007521 9.3e-43 177.2 121 67.8
Ciclev10007363m.g Citrus clementina HOM05D000417 ORTHO05D000342 9.3e-43 177.2 121 67.8
Sabra18G0064400 Salix brachista HOM05D002586 ORTHO05D007521 9.3e-43 177.2 120 68.3
Lj4g0022349 Lotus japonicus HOM05D002586 ORTHO05D007521 2.1e-42 176.0 122 68.0
Oeu034436.1 Olea europaea HOM05D000066 ORTHO05D000055 2.1e-42 176.0 122 68.9
Potri.018G072200 Populus trichocarpa HOM05D002586 ORTHO05D007521 2.1e-42 176.0 120 68.3
AT3G56120 Arabidopsis thaliana HOM05D002586 ORTHO05D007521 2.7e-42 175.6 120 67.5
HanXRQChr10g0317371 Helianthus annuus HOM05D002586 ORTHO05D007521 2.7e-42 175.6 120 67.5
Glyma.17G120833 Glycine max HOM05D002586 ORTHO05D007521 3.5e-42 175.3 128 64.8
Sc18g0001020 Simmondsia chinensis HOM05D002586 ORTHO05D007521 3.5e-42 175.3 122 65.6
PSO170G5904 Papaver somniferum HOM05D002586 ORTHO05D007521 4.6e-42 174.9 120 67.5
Glyma.05G012700 Glycine max HOM05D002586 ORTHO05D007521 6.0e-42 174.5 120 67.5
Sed0019430 Sechium edule HOM05D002586 ORTHO05D007521 6.0e-42 174.5 120 65.8
ClCG11G002640 Citrullus lanatus HOM05D002586 ORTHO05D007521 1.0e-41 173.7 141 62.4
Manes.03G068300 Manihot esculenta HOM05D002586 ORTHO05D007521 1.0e-41 173.7 120 68.3
TWI34G1303 Tripterygium wilfordii HOM05D002586 ORTHO05D007521 1.0e-41 173.7 120 69.2
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea HOM05D002586 ORTHO05D007521 1.3e-41 173.3 122 66.4
HanXRQChr12g0355841 Helianthus annuus HOM05D002586 ORTHO05D007521 1.7e-41 172.9 124 64.5
Peaxi162Scf00560g00619 Petunia axillaris HOM05D002586 ORTHO05D007521 1.7e-41 172.9 131 64.1
Aqoxy4G02394 Aquilegia oxysepala HOM05D002586 ORTHO05D007521 2.3e-41 172.6 122 68.0
ATR0605G072 Amborella trichopoda HOM05D002586 ORTHO05D007521 8.7e-41 170.6 121 66.1
THA.LOC104811104 Tarenaya hassleriana HOM05D002586 ORTHO05D007521 1.1e-40 170.2 120 65.8
Cc10_g11950 Coffea canephora HOM05D002586 ORTHO05D007521 1.5e-40 169.9 120 65.0
PSO210G4513 Papaver somniferum HOM05D002586 ORTHO05D007521 1.5e-40 169.9 120 66.7
ECA234G2455 Erigeron canadensis HOM05D000417 ORTHO05D007521 2.5e-40 169.1 122 63.9
Migut.D02058 Erythranthe guttata HOM05D002586 ORTHO05D007521 3.3e-40 168.7 124 62.9
Os02g0606300 Oryza sativa ssp. japonica HOM05D002586 ORTHO05D007521 5.6e-40 167.9 119 66.4
MBI01_g20396_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007521 8.1e-39 164.1 102 74.5
DCAR_028731 Daucus carota HOM05D002250 ORTHO05D007521 2.4e-38 162.5 122 63.1
Solyc05g006200.4 Solanum lycopersicum HOM05D002586 ORTHO05D007521 2.4e-38 162.5 118 65.3
Zm00001eb184100 Zea mays HOM05D002586 ORTHO05D007521 3.1e-38 162.2 119 67.2
SGA_v2.0_scaffold1G00550 Striga asiatica HOM05D002586 ORTHO05D007521 6.9e-38 161.0 120 60.8
Haze_25681 Corylus avellana HOM05D002586 ORTHO05D007521 5.8e-37 157.9 139 58.3
TAR383G0369 Trochodendron aralioides HOM05D002586 ORTHO05D007521 5.8e-37 157.9 102 69.6
BcaC07g39927 Brassica carinata HOM05D002586 ORTHO05D007521 7.6e-37 157.5 121 63.6
C08p31420 Brassica napus HOM05D002586 ORTHO05D007521 7.6e-37 157.5 121 63.6
BolC8t50763H Brassica oleracea HOM05D002586 ORTHO05D007521 7.6e-37 157.5 121 63.6
CSS0036442 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 9.9e-37 157.1 137 56.9
CAN.G444.6 Capsicum annuum HOM05D002586 ORTHO05D007521 9.9e-37 157.1 129 61.2
SEGI_20865 Sequoiadendron giganteum HOM05D002586 ORTHO05D007521 1.3e-36 156.8 129 56.6
FAN23G1201 Fragaria x ananassa HOM05D000417 ORTHO05D007521 2.9e-36 155.6 131 58.0
FAN19G1865 Fragaria x ananassa HOM05D002586 ORTHO05D007521 1.9e-35 152.9 131 56.5
vmacro06194 Vaccinium macrocarpon HOM05D002586 ORTHO05D007521 4.2e-35 151.8 135 55.6
Thhalv10005971m.g Eutrema salsugineum HOM05D002586 ORTHO05D007521 5.4e-35 151.4 131 58.8
FAN26G0906 Fragaria x ananassa HOM05D002586 ORTHO05D007521 5.4e-35 151.4 131 57.3
FAN26G3367 Fragaria x ananassa HOM05D002586 ORTHO05D007521 5.4e-35 151.4 131 57.3
Lsat_1_v5_gn_5_99861 Lactuca sativa HOM05D002586 ORTHO05D007521 7.1e-35 151.0 131 56.5
Cpa.g.sc23.142 Carica papaya HOM05D002586 ORTHO05D007521 2.1e-34 149.4 101 68.3
Lj7A641G79 Lonicera japonica HOM05D002586 ORTHO05D007521 2.1e-34 149.4 131 55.0
HPP92_026033 Vanilla planifolia HOM05D002586 ORTHO05D007521 2.1e-34 149.4 116 60.3
EL10Ac8g18544 Beta vulgaris HOM05D002586 ORTHO05D007521 2.7e-34 149.1 131 52.7
Psat4g043160 Pisum sativum HOM05D002586 ORTHO05D007521 4.6e-34 148.3 131 55.7
Sp5g06410 Schrenkiella parvula HOM05D002586 ORTHO05D007521 4.6e-34 148.3 131 57.3
Actinidia32694 Actinidia chinensis HOM05D002586 ORTHO05D007521 7.9e-34 147.5 110 68.2
MELO3C004542.2 Cucumis melo HOM05D002586 ORTHO05D007521 1.0e-33 147.1 102 65.7
AUR62011030 Chenopodium quinoa HOM05D002586 ORTHO05D007521 1.3e-33 146.7 131 53.4
FvH4_1g05380 Fragaria vesca HOM05D002586 ORTHO05D007521 1.3e-33 146.7 99 67.7
Rhsim03G0244900 Rhododendron simsii HOM05D002586 ORTHO05D007521 1.3e-33 146.7 132 55.3
Medtr4g112015 Medicago truncatula HOM05D002586 ORTHO05D007521 2.3e-33 146.0 131 55.0
Ca_02541_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007521 3.3e-32 142.1 111 58.6
Aa31LG10G11030 Aethionema arabicum HOM05D002586 ORTHO05D007521 7.4e-32 141.0 131 54.2
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea HOM05D002586 ORTHO05D007521 9.6e-32 140.6 111 59.5
BcaB01g00029 Brassica carinata HOM05D002586 ORTHO05D007521 3.7e-31 138.7 131 55.0
A09p49100 Brassica napus HOM05D002586 ORTHO05D007521 1.1e-30 137.1 131 54.2
BraA09t40362Z Brassica rapa HOM05D002586 ORTHO05D007521 1.1e-30 137.1 131 54.2
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea HOM05D002586 ORTHO05D007521 2.4e-30 136.0 111 56.8
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea HOM05D002586 ORTHO05D007521 1.5e-29 133.3 102 60.8
SMO141G0090 Selaginella moellendorffii HOM05D002586 ORTHO05D007521 7.6e-29 131.0 128 48.4
arahy.Tifrunner.gnm1.ann1.LVY3P8 Arachis hypogaea HOM05D002586 ORTHO05D007521 1.1e-27 127.1 144 47.9
PGSC0003DMG401015580 Solanum tuberosum HOM05D002586 ORTHO05D007521 1.4e-27 126.7 97 61.9
Nitab4.5_0000066g0020 Nicotiana tabacum HOM05D002586 ORTHO05D007521 1.6e-26 123.2 129 51.9
Nitab4.5_0000005g0480 Nicotiana tabacum HOM05D002586 ORTHO05D007521 7.9e-26 120.9 129 51.2
SalBow1G1951 Salvia bowleyana HOM05D002586 ORTHO05D007521 1.3e-23 113.6 131 44.3
unitig_46.g18492 Utricularia gibba HOM05D002586 ORTHO05D007521 1.6e-23 113.2 131 45.8
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis HOM05D002586 ORTHO05D007521 6.2e-23 111.3 126 46.8
SGA_v2.0_scaffold42G16128 Striga asiatica HOM05D002586 ORTHO05D007521 2.4e-22 109.4 120 47.5
Mapoly0022s0148 Marchantia polymorpha HOM05D002586 ORTHO05D007521 1.3e-20 103.6 126 39.7
Pp3c17_17170 Physcomitrium patens HOM05D002586 ORTHO05D007521 6.5e-20 101.3 118 43.2
arahy.Tifrunner.gnm1.ann1.4YWE6A Arachis hypogaea HOM05D002586 ORTHO05D007521 2.5e-19 99.4 69 68.1
COL.COLO4_34935 Corchorus olitorius HOM05D002586 ORTHO05D007521 7.9e-18 94.4 62 71.0
Duzib168G1197 Durio zibethinus HOM05D002586 ORTHO05D007521 5.1e-17 91.7 95 55.8
SHI02609 Sapria himalayana HOM05D002586 ORTHO05D007521 1.5e-16 90.1 96 46.9
CBR_g154 Chara braunii HOM05D002586 ORTHO05D007521 7.4e-16 87.8 128 32.8
Hund14754 Selenicereus undatus HOM05D002586 ORTHO05D007521 1.1e-14 84.0 106 42.5
MCO08G012 Micromonas commoda HOM05D002586 ORTHO05D007521 1.0e-12 77.4 128 29.7
Cre16.g672041 Chlamydomonas reinhardtii HOM05D002586 ORTHO05D007521 8.5e-12 74.3 129 34.9
Eucgr.C01077 Eucalyptus grandis HOM05D002586 ORTHO05D007521 3.6e-10 68.9 68 51.5
Haze_09552 Corylus avellana HOM05D002586 ORTHO05D007009 4.1e-06 55.5 74 39.2
Cfa020488 Carpinus fangiana HOM05D002586 ORTHO05D007009 5.3e-06 55.1 74 39.2
Oeu006771.1 Olea europaea HOM05D002586 ORTHO05D007009 6.9e-06 54.7 74 35.1


User provided reference genes

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