Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.3e-38 162.5 80 100.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 2.0e-23 112.1 68 82.4
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 2.8e-17 91.7 68 63.2
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 4.8e-17 90.9 66 65.2
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 6.3e-17 90.5 68 60.3
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 6.3e-17 90.5 66 63.6
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.1e-16 89.7 66 65.2
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.1e-16 89.7 66 65.2
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.4e-16 89.4 68 60.3
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.8e-16 89.0 66 59.1
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.8e-16 89.0 56 73.2
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.4e-16 88.6 66 60.6
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 2.4e-16 88.6 67 58.2
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.4e-16 88.6 68 58.8
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.4e-16 88.6 66 62.1
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 4.1e-16 87.8 64 60.9
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.1e-16 87.8 66 59.1
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 5.3e-16 87.4 68 58.8
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 7.0e-16 87.0 68 58.8
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.0e-16 87.0 68 57.4
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 9.1e-16 86.7 66 63.6
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 9.1e-16 86.7 57 68.4
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 9.1e-16 86.7 68 57.4
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.2e-15 86.3 57 70.2
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.2e-15 86.3 66 62.1
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.2e-15 86.3 66 57.6
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.6e-15 85.9 66 59.1
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 2.0e-15 85.5 66 62.1
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 2.0e-15 85.5 66 62.1
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 2.6e-15 85.1 57 68.4
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.6e-15 85.1 72 52.8
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 3.5e-15 84.7 66 60.6
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 3.5e-15 84.7 66 62.1
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 3.5e-15 84.7 72 55.6
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 3.5e-15 84.7 66 57.6
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 3.5e-15 84.7 66 59.1
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 4.5e-15 84.3 66 60.6
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 4.5e-15 84.3 66 60.6
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 4.5e-15 84.3 57 64.9
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 4.5e-15 84.3 64 64.1
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 5.9e-15 84.0 56 69.6
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 5.9e-15 84.0 66 54.5
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 5.9e-15 84.0 66 54.5
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 5.9e-15 84.0 66 54.5
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 5.9e-15 84.0 66 57.6
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 7.7e-15 83.6 66 59.1
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 7.7e-15 83.6 57 68.4
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 7.7e-15 83.6 72 52.8
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.0e-14 83.2 56 66.1
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.0e-14 83.2 66 56.1
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.3e-14 82.8 67 56.7
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.3e-14 82.8 56 66.1
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 1.3e-14 82.8 56 66.1
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.7e-14 82.4 59 64.4
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.7e-14 82.4 66 59.1
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.7e-14 82.4 66 56.1
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.7e-14 82.4 66 59.1
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 2.2e-14 82.0 66 56.1
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 2.2e-14 82.0 66 57.6
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.9e-14 81.6 72 50.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 3.8e-14 81.3 66 56.1
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 3.8e-14 81.3 72 52.8
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 5.0e-14 80.9 57 64.9
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 5.0e-14 80.9 57 61.4
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.5e-14 80.5 66 60.6
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 6.5e-14 80.5 72 50.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 6.5e-14 80.5 57 61.4
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 6.5e-14 80.5 57 61.4
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 6.5e-14 80.5 61 57.4
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 6.5e-14 80.5 68 54.4
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 8.5e-14 80.1 63 57.1
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 8.5e-14 80.1 63 57.1
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 8.5e-14 80.1 63 57.1
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 8.5e-14 80.1 66 54.5
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 8.5e-14 80.1 72 52.8
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 8.5e-14 80.1 68 55.9
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 8.5e-14 80.1 56 64.3
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.1e-13 79.7 68 58.8
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.5e-13 79.3 66 53.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.9e-13 79.0 57 64.9
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.5e-13 78.6 60 60.0
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.5e-13 78.6 60 60.0
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 2.5e-13 78.6 56 64.3
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 3.2e-13 78.2 65 53.8
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.2e-13 77.8 55 61.8
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.5e-13 77.4 58 62.1
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 7.2e-13 77.0 66 51.5
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 7.2e-13 77.0 57 63.2
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 7.2e-13 77.0 57 63.2
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 7.2e-13 77.0 68 51.5
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 9.4e-13 76.6 59 55.9
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.2e-12 76.3 62 59.7
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.2e-12 76.3 57 63.2
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.2e-12 76.3 55 63.6
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.1e-12 75.5 57 61.4
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 2.7e-12 75.1 66 54.5
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 2.7e-12 75.1 67 52.2
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 2.7e-12 75.1 69 49.3
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 6.1e-12 73.9 55 63.6
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 6.1e-12 73.9 68 51.5
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 6.1e-12 73.9 66 50.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 8.0e-12 73.6 66 54.5
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 8.0e-12 73.6 57 56.1
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 8.0e-12 73.6 66 50.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 1.0e-11 73.2 66 51.5
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.4e-11 72.8 83 47.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 3.0e-11 71.6 49 69.4
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 4.0e-11 71.2 63 49.2
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 6.7e-11 70.5 56 55.4
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.0e-10 68.9 53 58.5
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 5.7e-10 67.4 49 61.2
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.7e-09 65.9 48 60.4
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 2.2e-09 65.5 53 52.8
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.8e-08 62.4 36 72.2
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.6e-07 59.3 54 55.6
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 2.0e-07 58.9 48 56.2
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 1.0e-06 56.6 48 54.2
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.8e-06 54.7 68 39.7
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 5.0e-06 54.3 29 82.8


User provided reference genes

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