Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 4.7e-67 257.7 125 100.0
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.5e-62 242.7 125 93.6
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 3.5e-54 214.9 124 80.6
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 1.3e-53 213.0 118 81.4
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.9e-52 209.1 123 78.0
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 3.2e-52 208.4 118 80.5
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.3e-50 202.2 119 78.2
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 3.0e-50 201.8 119 78.2
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 6.7e-50 200.7 119 77.3
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 3.3e-49 198.4 118 76.3
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 7.0e-47 190.7 125 70.4
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 9.1e-47 190.3 118 71.2
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.5e-46 188.3 118 72.0
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.5e-46 188.3 118 72.0
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.5e-46 188.3 118 72.0
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.0e-45 186.8 122 72.1
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 3.8e-45 184.9 118 72.0
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 5.0e-45 184.5 118 70.3
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 5.0e-45 184.5 118 71.2
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.1e-44 183.3 116 69.0
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.5e-44 183.0 122 68.0
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 7.2e-44 180.6 118 71.2
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 7.2e-44 180.6 118 69.5
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 9.4e-44 180.3 118 68.6
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 9.4e-44 180.3 118 71.2
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.2e-43 179.9 118 72.9
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.2e-43 179.9 118 71.2
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.6e-43 179.5 124 63.7
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.1e-43 179.1 125 66.4
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.1e-43 179.1 126 63.5
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 2.7e-43 178.7 122 67.2
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 4.7e-43 177.9 121 66.1
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 4.7e-43 177.9 125 68.0
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 6.1e-43 177.6 122 65.6
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.4e-42 176.4 122 64.8
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.4e-42 176.4 118 69.5
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 1.4e-42 176.4 118 66.9
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.8e-42 176.0 122 64.8
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.8e-42 176.0 122 63.9
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.8e-42 176.0 122 63.9
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.8e-42 176.0 118 67.8
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.8e-42 176.0 124 64.5
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 2.3e-42 175.6 116 68.1
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 3.0e-42 175.3 119 68.1
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 6.8e-42 174.1 117 66.7
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 8.8e-42 173.7 128 63.3
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 8.8e-42 173.7 124 64.5
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 1.5e-41 172.9 119 66.4
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.5e-41 172.9 119 67.2
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 2.6e-41 172.2 126 61.1
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 3.4e-41 171.8 117 65.0
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 4.4e-41 171.4 120 63.3
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 4.4e-41 171.4 135 63.0
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 5.7e-41 171.0 126 60.3
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.7e-41 171.0 119 68.1
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 7.5e-41 170.6 118 65.3
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 7.5e-41 170.6 118 62.7
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 9.8e-41 170.2 118 66.9
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 9.8e-41 170.2 127 65.4
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 2.8e-40 168.7 118 67.8
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.8e-40 168.7 117 65.8
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 2.8e-40 168.7 118 61.0
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 6.3e-40 167.5 105 73.3
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.9
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.0
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.1e-39 166.8 126 59.5
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.0
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.0
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.1e-39 166.8 126 59.5
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.1e-39 166.8 122 60.7
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 64.4
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 1.8e-39 166.0 119 63.9
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 2.4e-39 165.6 126 58.7
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 2.4e-39 165.6 117 63.2
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 3.1e-39 165.2 126 58.7
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.1e-39 165.2 126 58.7
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 4.1e-39 164.9 116 62.1
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.6e-38 162.9 125 61.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 3.5e-38 161.8 109 67.9
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 5.9e-38 161.0 126 64.3
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.9e-38 161.0 105 70.5
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.9e-37 158.7 118 64.4
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 2.9e-37 158.7 134 59.7
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 3.8e-37 158.3 161 49.7
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 5.0e-37 157.9 118 64.4
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 2.5e-36 155.6 118 60.2
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 2.5e-36 155.6 116 60.3
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.5e-36 154.5 108 61.1
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 1.4e-34 149.8 102 61.8
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 8.9e-34 147.1 106 62.3
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 2.0e-33 146.0 102 63.7
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 7.5e-33 144.1 100 66.0
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 9.8e-33 143.7 126 51.6
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 6.3e-32 141.0 122 52.5
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 1.8e-31 139.4 122 52.5
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.0e-30 136.0 121 53.7
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.0e-30 136.0 99 59.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 2.7e-30 135.6 100 63.0
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 2.7e-30 135.6 105 57.1
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.5e-30 135.2 121 52.9
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 8.6e-29 130.6 125 47.2
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 1.5e-28 129.8 126 55.6
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.2e-27 126.7 105 53.3
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 5.2e-26 121.3 93 61.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 6.8e-26 120.9 90 60.0
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.7e-24 116.3 79 60.8
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 2.2e-24 115.9 84 65.5
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 4.9e-24 114.8 83 61.4
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.9e-23 112.8 86 61.6
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 3.0e-21 105.5 132 40.9
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 4.7e-19 98.2 66 59.1
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.4e-18 96.7 63 63.5
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 2.6e-17 92.4 123 45.5
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 3.3e-12 75.5 119 37.8
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 9.5e-12 73.9 58 62.1
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 2.3e-10 69.3 43 72.1
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.5e-09 66.6 45 64.4
Nn1g09285 Nelumbo nucifera HOM05D006897 ORTHO05D008825 4.4e-09 65.1 33 90.9
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.7e-08 63.2 39 69.2
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 3.7e-08 62.0 41 65.9


User provided reference genes

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