Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 8.9e-84 313.5 156 100.0
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 9.9e-67 256.9 156 85.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.1e-41 173.7 143 67.8
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.4e-41 173.3 165 60.6
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.4e-41 173.3 132 68.9
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 3.2e-41 172.2 131 70.2
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 5.5e-41 171.4 123 70.7
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 7.1e-41 171.0 130 68.5
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 7.1e-41 171.0 117 71.8
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 9.3e-41 170.6 151 62.3
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.6e-40 169.9 130 67.7
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 1.6e-40 169.9 116 75.0
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 2.7e-40 169.1 120 70.0
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 3.5e-40 168.7 130 68.5
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 4.6e-40 168.3 132 69.7
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 6.0e-40 167.9 122 72.1
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 7.9e-40 167.5 133 68.4
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 7.9e-40 167.5 123 71.5
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 7.9e-40 167.5 117 70.9
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.0e-39 167.2 116 69.8
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 131 66.4
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.3e-39 166.8 126 71.4
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.3e-39 166.8 126 71.4
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 1.3e-39 166.8 129 68.2
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.8e-39 166.4 136 66.9
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.8e-39 166.4 138 64.5
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 1.8e-39 166.4 116 72.4
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 2.3e-39 166.0 157 59.9
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 3.0e-39 165.6 123 68.3
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 3.0e-39 165.6 116 71.6
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 3.9e-39 165.2 131 68.7
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 3.9e-39 165.2 128 70.3
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 5.1e-39 164.9 117 71.8
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 6.7e-39 164.5 124 71.8
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 6.7e-39 164.5 132 67.4
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 8.7e-39 164.1 133 68.4
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 8.7e-39 164.1 131 67.9
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 8.7e-39 164.1 85 92.9
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 8.7e-39 164.1 111 75.7
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-38 163.7 116 71.6
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 1.1e-38 163.7 125 69.6
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.5e-38 163.3 122 69.7
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 1.5e-38 163.3 116 71.6
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.5e-38 163.3 84 94.0
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.5e-38 163.3 125 70.4
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.5e-38 163.3 116 69.0
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 1.5e-38 163.3 116 69.8
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.9e-38 162.9 123 70.7
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 1.9e-38 162.9 116 69.0
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.5e-38 162.5 137 61.3
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 2.5e-38 162.5 131 67.9
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 2.5e-38 162.5 127 69.3
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 2.5e-38 162.5 133 63.9
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 3.3e-38 162.2 127 68.5
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 3.3e-38 162.2 127 67.7
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 3.3e-38 162.2 122 67.2
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 4.3e-38 161.8 127 68.5
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 4.3e-38 161.8 116 71.6
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 4.3e-38 161.8 119 69.7
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 5.7e-38 161.4 135 66.7
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 5.7e-38 161.4 110 75.5
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 5.7e-38 161.4 130 64.6
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.7e-38 161.4 85 91.8
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 5.7e-38 161.4 85 91.8
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 5.7e-38 161.4 110 76.4
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 7.4e-38 161.0 130 66.9
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 7.4e-38 161.0 127 68.5
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 9.7e-38 160.6 120 67.5
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 9.7e-38 160.6 117 69.2
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 9.7e-38 160.6 152 59.9
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.6e-37 159.8 136 62.5
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.6e-37 159.8 118 69.5
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 1.6e-37 159.8 121 67.8
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.6e-37 159.8 85 90.6
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 2.2e-37 159.5 128 67.2
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 3.7e-37 158.7 119 68.1
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.7e-37 158.7 83 91.6
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 6.3e-37 157.9 128 68.0
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 6.3e-37 157.9 145 60.7
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 8.2e-37 157.5 131 66.4
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.1e-36 157.1 128 62.5
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.4e-36 156.8 137 66.4
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.4e-36 156.8 128 64.8
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 1.4e-36 156.8 128 62.5
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.8e-36 156.4 116 68.1
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.8e-36 156.4 132 62.1
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 2.4e-36 156.0 127 64.6
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 2.4e-36 156.0 130 63.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 4.1e-36 155.2 123 65.9
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 6.9e-36 154.5 128 66.4
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 6.9e-36 154.5 128 66.4
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 6.9e-36 154.5 148 58.8
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 9.0e-36 154.1 147 59.2
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.5e-35 153.3 135 64.4
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.6e-35 152.5 84 88.1
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 3.4e-35 152.1 84 90.5
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 1.0e-34 150.6 122 67.2
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.3e-34 150.2 78 92.3
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.3e-34 150.2 84 86.9
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 3.8e-34 148.7 142 59.2
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 5.0e-34 148.3 86 80.2
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 6.5e-34 147.9 78 92.3
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 8.5e-34 147.5 126 62.7
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 3.2e-33 145.6 129 64.3
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 9.4e-33 144.1 115 68.7
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 9.4e-33 144.1 131 59.5
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 9.4e-33 144.1 86 79.1
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 1.6e-32 143.3 82 86.6
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 3.6e-32 142.1 154 53.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 4.6e-32 141.7 134 57.5
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.8e-31 139.8 75 89.3
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 1.8e-31 139.8 157 49.7
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 2.3e-31 139.4 127 60.6
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 5.1e-31 138.3 78 87.2
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 8.8e-31 137.5 119 58.0
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 7.4e-30 134.4 79 84.8
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 9.1e-28 127.5 135 50.4
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.9e-25 119.8 134 51.5
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.6e-24 116.7 79 73.4
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 3.6e-24 115.5 112 54.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.5e-22 110.2 104 55.8
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 2.2e-21 106.3 75 65.3
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 1.1e-20 104.0 78 66.7
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 2.0e-19 99.8 83 60.2
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 1.2e-16 90.5 80 57.5
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 2.7e-16 89.4 77 54.5
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.2e-08 63.9 36 91.7
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 5.7e-06 55.1 65 43.1


User provided reference genes

Program Settings