Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0939 Ceratophyllum demersum HOM05D005559 ORTHO05D006957 3.7e-63 244.6 115 100.0
CiPaw.07G133700 Carya illinoinensis HOM05D005559 ORTHO05D006957 4.8e-34 147.9 96 71.9
TAR381G1403 Trochodendron aralioides HOM05D005559 ORTHO05D006957 1.4e-33 146.4 119 61.3
Aqoxy6G02983 Aquilegia oxysepala HOM05D005559 ORTHO05D006957 4.0e-33 144.8 96 69.8
Dinv13752 Davidia involucrata HOM05D005559 ORTHO05D006957 6.9e-33 144.1 96 70.8
Nn5g31046 Nelumbo nucifera HOM05D005559 ORTHO05D006957 1.2e-32 143.3 118 60.2
SalBow6G6240 Salvia bowleyana HOM05D005559 ORTHO05D006957 2.0e-32 142.5 116 58.6
MSTRG.24514 Avicennia marina HOM05D005559 ORTHO05D006957 3.4e-32 141.7 119 59.7
GSVIVG01013425001 Vitis vinifera HOM05D005559 ORTHO05D006957 4.5e-32 141.4 96 70.8
MBI01_g28397_MAGBIO Magnolia biondii HOM05D005559 ORTHO05D006957 5.8e-32 141.0 119 58.8
PSO541G1621 Papaver somniferum HOM05D005559 ORTHO05D006957 1.0e-31 140.2 105 61.9
Actinidia17075 Actinidia chinensis HOM05D005559 ORTHO05D006957 1.3e-31 139.8 96 67.7
Manes.18G002100 Manihot esculenta HOM05D005559 ORTHO05D006957 1.3e-31 139.8 96 69.8
MD06G1004300 Malus domestica HOM05D005559 ORTHO05D006957 1.7e-31 139.4 115 62.6
CSS0038076 Camellia sinensis var. sinensis HOM05D005559 ORTHO05D006957 2.9e-31 138.7 106 61.3
CANSAT25G2267 Cannabis sativa HOM05D005559 ORTHO05D006957 2.9e-31 138.7 119 58.8
Oeu035757.2 Olea europaea HOM05D005559 ORTHO05D006957 2.9e-31 138.7 96 66.7
Ciclev10001002m.g Citrus clementina HOM05D005559 ORTHO05D006957 3.8e-31 138.3 112 62.5
QL02p015726 Quercus lobata HOM05D005559 ORTHO05D006957 3.8e-31 138.3 119 61.3
Thecc.08G100000 Theobroma cacao HOM05D005559 ORTHO05D006957 3.8e-31 138.3 119 59.7
Cfa014135 Carpinus fangiana HOM05D005559 ORTHO05D006957 4.9e-31 137.9 96 67.7
Eucgr.F01812 Eucalyptus grandis HOM05D005559 ORTHO05D006957 4.9e-31 137.9 119 58.0
Medtr1g026540 Medicago truncatula HOM05D005559 ORTHO05D006957 4.9e-31 137.9 96 68.8
Lj4A5T46 Lonicera japonica HOM05D005559 ORTHO05D006957 8.4e-31 137.1 96 66.7
Phvul.001G000700 Phaseolus vulgaris HOM05D005559 ORTHO05D006957 8.4e-31 137.1 96 68.8
Psat0s1355g0040 Pisum sativum HOM05D005559 ORTHO05D006957 8.4e-31 137.1 118 59.3
Sc26g0004750 Simmondsia chinensis HOM05D005559 ORTHO05D006957 8.4e-31 137.1 93 67.7
Haze_22861 Corylus avellana HOM05D005559 ORTHO05D006957 1.1e-30 136.7 96 67.7
Prupe.5G005700 Prunus persica HOM05D005559 ORTHO05D006957 1.1e-30 136.7 115 61.7
PGR031G1403 Punica granatum HOM05D005559 ORTHO05D006957 1.1e-30 136.7 96 66.7
vmacro21769 Vaccinium macrocarpon HOM05D005559 ORTHO05D006957 1.1e-30 136.7 106 61.3
Atru.chr13.62 Acer truncatum HOM05D005559 ORTHO05D006957 1.4e-30 136.3 126 55.6
DCAR_023024 Daucus carota HOM05D005559 ORTHO05D006957 1.4e-30 136.3 119 57.1
TPR.G26383 Trifolium pratense HOM05D005559 ORTHO05D006957 1.4e-30 136.3 96 66.7
TWI56G0785 Tripterygium wilfordii HOM05D005559 ORTHO05D006957 1.4e-30 136.3 119 57.1
unitig_22.g5730 Utricularia gibba HOM05D005559 ORTHO05D006957 1.4e-30 136.3 96 67.7
Gorai.002G112800 Gossypium raimondii HOM05D005559 ORTHO05D006957 1.9e-30 136.0 119 58.8
Lalb_Chr01g0008311 Lupinus albus HOM05D005559 ORTHO05D006957 2.5e-30 135.6 114 61.4
SGA_v2.0_scaffold227G43160 Striga asiatica HOM05D005559 ORTHO05D006957 2.5e-30 135.6 96 66.7
PSO675G8223 Papaver somniferum HOM05D005559 ORTHO05D006957 3.2e-30 135.2 96 63.5
Migut.N02985 Erythranthe guttata HOM05D005559 ORTHO05D006957 4.2e-30 134.8 96 67.7
Nitab4.5_0001756g0040 Nicotiana tabacum HOM05D005559 ORTHO05D006957 4.2e-30 134.8 103 65.0
Os02g0715200 Oryza sativa ssp. japonica HOM05D005559 ORTHO05D006957 4.2e-30 134.8 96 63.5
Ca_13494_v3 Cicer arietinum L. HOM05D005559 ORTHO05D006957 5.5e-30 134.4 96 64.6
Ca_30151_v3 Cicer arietinum L. HOM05D005559 ORTHO05D006957 5.5e-30 134.4 96 64.6
Glyma.14G223900 Glycine max HOM05D005559 ORTHO05D006957 5.5e-30 134.4 118 59.3
Glyma.17G262100 Glycine max HOM05D005559 ORTHO05D006957 5.5e-30 134.4 118 59.3
Gohir.D01G087100 Gossypium hirsutum HOM05D005559 ORTHO05D006957 5.5e-30 134.4 119 58.8
Gohir.A01G102000 Gossypium hirsutum HOM05D005559 ORTHO05D006957 7.1e-30 134.0 119 58.0
VMungo0647G1813 Vigna mungo HOM05D005559 ORTHO05D006957 7.1e-30 134.0 109 60.6
CSS0028031 Camellia sinensis var. sinensis HOM05D005559 ORTHO05D006957 9.3e-30 133.7 115 55.7
Duzib116G0447 Durio zibethinus HOM05D005559 ORTHO05D006957 9.3e-30 133.7 119 57.1
PGSC0003DMG400009923 Solanum tuberosum HOM05D005559 ORTHO05D006957 9.3e-30 133.7 93 69.9
EL10Ac1g01873 Beta vulgaris HOM05D005559 ORTHO05D006957 1.2e-29 133.3 93 67.7
Cc10_g00280 Coffea canephora HOM05D005559 ORTHO05D006957 1.2e-29 133.3 93 66.7
Potri.002G005100 Populus trichocarpa HOM05D005559 ORTHO05D006957 1.2e-29 133.3 96 66.7
FvH4_5g26130 Fragaria vesca HOM05D005559 ORTHO05D006957 2.1e-29 132.5 93 67.7
Solyc04g082750.3 Solanum lycopersicum HOM05D005559 ORTHO05D006957 2.1e-29 132.5 103 65.0
Sopen04g036390 Solanum pennellii HOM05D005559 ORTHO05D006957 2.1e-29 132.5 103 65.0
CAN.G1330.11 Capsicum annuum HOM05D005559 ORTHO05D006957 2.7e-29 132.1 106 64.2
Cpa.g.sc26.16 Carica papaya HOM05D005559 ORTHO05D006957 2.7e-29 132.1 96 66.7
ClCG11G019030 Citrullus lanatus HOM05D005559 ORTHO05D006957 2.7e-29 132.1 96 61.5
HPP92_020534 Vanilla planifolia HOM05D005559 ORTHO05D006957 2.7e-29 132.1 116 61.2
MELO3C017057.2 Cucumis melo HOM05D005559 ORTHO05D006957 3.5e-29 131.7 96 61.5
CsaV3_4G037630 Cucumis sativus L. HOM05D005559 ORTHO05D006957 3.5e-29 131.7 96 61.5
AUR62024097 Chenopodium quinoa HOM05D005559 ORTHO05D006957 4.6e-29 131.3 93 67.7
FAN18G3125 Fragaria x ananassa HOM05D005559 ORTHO05D006957 4.6e-29 131.3 92 67.4
Lj5g0020249 Lotus japonicus HOM05D005559 ORTHO05D006957 4.6e-29 131.3 119 56.3
RcHm_v2.0_Chr7g0216661 Rosa chinensis HOM05D005559 ORTHO05D006957 4.6e-29 131.3 93 66.7
Sabra02G0003600 Salix brachista HOM05D005559 ORTHO05D006957 4.6e-29 131.3 96 64.6
FAN08G1655 Fragaria x ananassa HOM05D005559 ORTHO05D006957 6.0e-29 131.0 92 67.4
SEGI_07319 Sequoiadendron giganteum HOM05D005559 ORTHO05D006957 6.0e-29 131.0 109 56.0
SEGI_39851 Sequoiadendron giganteum HOM05D005559 ORTHO05D006957 6.0e-29 131.0 109 56.0
Rhsim06G0003400 Rhododendron simsii HOM05D005559 ORTHO05D006957 7.9e-29 130.6 89 67.4
FAN13G1149 Fragaria x ananassa HOM05D005559 ORTHO05D006957 1.0e-28 130.2 92 67.4
Sabra02G0003500 Salix brachista HOM05D005559 ORTHO05D006957 1.0e-28 130.2 96 64.6
ATR0605G082 Amborella trichopoda HOM05D005559 ORTHO05D006957 1.3e-28 129.8 118 57.6
A03p18820 Brassica napus HOM05D005559 ORTHO05D006957 3.0e-28 128.6 119 57.1
BraA03t11142Z Brassica rapa HOM05D005559 ORTHO05D006957 3.0e-28 128.6 119 57.1
Sed0000545 Sechium edule HOM05D005559 ORTHO05D006957 3.0e-28 128.6 88 65.9
Aa31LG9G13560 Aethionema arabicum HOM05D005559 ORTHO05D006957 3.9e-28 128.3 119 56.3
COL.COLO4_12311 Corchorus olitorius HOM05D005559 ORTHO05D006957 3.9e-28 128.3 119 56.3
Peaxi162Scf00680g00636 Petunia axillaris HOM05D005559 ORTHO05D006957 3.9e-28 128.3 93 67.7
Ah.01g024690 Amaranthus hybridus HOM05D005559 ORTHO05D006957 6.7e-28 127.5 93 66.7
AL4G29300 Arabidopsis lyrata HOM05D005559 ORTHO05D006957 6.7e-28 127.5 119 55.5
Zm00001eb252680 Zea mays HOM05D005559 ORTHO05D006957 6.7e-28 127.5 96 61.5
C03p21990 Brassica napus HOM05D005559 ORTHO05D006957 8.7e-28 127.1 119 56.3
BolC3t14582H Brassica oleracea HOM05D005559 ORTHO05D006957 8.7e-28 127.1 119 56.3
ECA238G3676 Erigeron canadensis HOM05D005559 ORTHO05D006957 8.7e-28 127.1 96 61.5
FvH4_5g26160 Fragaria vesca HOM05D005559 ORTHO05D006957 1.9e-27 125.9 87 67.8
THA.LOC104806872 Tarenaya hassleriana HOM05D005559 ORTHO05D006957 1.9e-27 125.9 119 53.8
BcaC01g05830 Brassica carinata HOM05D005559 ORTHO05D006957 2.5e-27 125.6 119 55.5
Ah.03g148440 Amaranthus hybridus HOM05D005559 ORTHO05D006957 3.3e-27 125.2 93 62.4
BcaB01g03926 Brassica carinata HOM05D005559 ORTHO05D006957 5.7e-27 124.4 119 55.5
Thhalv10016587m.g Eutrema salsugineum HOM05D005559 ORTHO05D006957 7.4e-27 124.0 92 65.2
arahy.Tifrunner.gnm1.ann1.MFDH98 Arachis hypogaea HOM05D005559 ORTHO05D006957 9.6e-27 123.6 97 61.9
CARHR127640 Cardamine hirsuta HOM05D005559 ORTHO05D006957 9.6e-27 123.6 119 54.6
Lsat_1_v5_gn_2_3240 Lactuca sativa HOM05D005559 ORTHO05D006957 9.6e-27 123.6 96 62.5
AT2G33630 Arabidopsis thaliana HOM05D005559 ORTHO05D006957 1.3e-26 123.2 119 52.9
HanXRQChr06g0185311 Helianthus annuus HOM05D005559 ORTHO05D006957 1.6e-26 122.9 96 61.5
Peaxi162Scf00269g00414 Petunia axillaris HOM05D005559 ORTHO05D006957 1.6e-26 122.9 106 59.4
Sp4g15980 Schrenkiella parvula HOM05D005559 ORTHO05D006957 1.6e-26 122.9 119 54.6
Carub.0004s1526 Capsella rubella HOM05D005559 ORTHO05D006957 2.8e-26 122.1 92 64.1
Hund01836 Selenicereus undatus HOM05D005559 ORTHO05D006957 4.1e-25 118.2 93 61.3
SMO147G0007 Selaginella moellendorffii HOM05D005559 ORTHO05D006957 1.7e-23 112.8 116 46.6
AUR62035169 Chenopodium quinoa HOM05D005559 ORTHO05D006957 6.5e-23 110.9 93 58.1
PSO675G8730 Papaver somniferum HOM05D005559 ORTHO05D006957 3.2e-22 108.6 93 61.3
PSO541G1320 Papaver somniferum HOM05D005559 ORTHO05D006957 5.5e-22 107.8 113 54.0
FAN18G3488 Fragaria x ananassa HOM05D005559 ORTHO05D006957 1.5e-19 99.8 69 65.2
Carub.0002s2336 Capsella rubella HOM05D005559 ORTHO05D006957 4.3e-19 98.2 89 51.7
BcaC08g47151 Brassica carinata HOM05D005559 ORTHO05D006957 4.8e-18 94.7 89 48.3
Aa31LG4G6530 Aethionema arabicum HOM05D005559 ORTHO05D006957 8.2e-18 94.0 92 48.9
AL2G36580 Arabidopsis lyrata HOM05D005559 ORTHO05D006957 1.1e-17 93.6 89 50.6
Thhalv10018454m.g Eutrema salsugineum HOM05D005559 ORTHO05D006957 1.8e-17 92.8 109 42.2
BcaC08g47244 Brassica carinata HOM05D005559 ORTHO05D006957 5.3e-17 91.3 89 48.3
C06p50680 Brassica napus HOM05D005559 ORTHO05D006957 6.9e-17 90.9 89 48.3
BolC6t40094H Brassica oleracea HOM05D005559 ORTHO05D006957 9.0e-17 90.5 89 48.3
A07p42110 Brassica napus HOM05D005559 ORTHO05D006957 1.2e-16 90.1 89 47.2
Sp5g31610 Schrenkiella parvula HOM05D005559 ORTHO05D006957 3.4e-16 88.6 89 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1400 Anthoceros agrestis HOM05D005559 ORTHO05D006957 4.5e-16 88.2 112 46.4
BraA07t31740Z Brassica rapa HOM05D005559 ORTHO05D006957 1.3e-15 86.7 89 46.1
BcaB07g33844 Brassica carinata HOM05D002028 ORTHO05D002474 2.2e-07 59.3 73 41.1
Actinidia15523 Actinidia chinensis HOM05D005559 ORTHO05D006957 2.9e-07 58.9 41 63.4
THA.LOC104819910 Tarenaya hassleriana HOM05D002028 ORTHO05D002474 5.0e-07 58.2 71 43.7
THA.LOC104803571 Tarenaya hassleriana HOM05D002028 ORTHO05D002474 6.5e-07 57.8 71 43.7
AT1G47290 Arabidopsis thaliana HOM05D002028 ORTHO05D002474 8.5e-07 57.4 73 43.8
COL.COLO4_21163 Corchorus olitorius HOM05D002028 ORTHO05D002474 8.5e-07 57.4 71 46.5
AL1G53470 Arabidopsis lyrata HOM05D002028 ORTHO05D002474 1.4e-06 56.6 73 42.5
Carub.0001s3610 Capsella rubella HOM05D002028 ORTHO05D002474 1.4e-06 56.6 73 42.5
BcaC08g42942 Brassica carinata HOM05D002028 ORTHO05D002474 2.5e-06 55.8 73 38.4
A10p06480 Brassica napus HOM05D002028 ORTHO05D002474 2.5e-06 55.8 73 39.7
C06p01850 Brassica napus HOM05D002028 ORTHO05D002474 2.5e-06 55.8 73 38.4
BraA10t42908Z Brassica rapa HOM05D002028 ORTHO05D002474 2.5e-06 55.8 73 39.7
SalBow8G3331 Salvia bowleyana HOM05D002028 ORTHO05D002474 3.2e-06 55.5 71 45.1
Duzib168G0204 Durio zibethinus HOM05D002028 ORTHO05D002474 4.2e-06 55.1 71 43.7
Eucgr.C00745 Eucalyptus grandis HOM05D002028 ORTHO05D002474 4.2e-06 55.1 73 42.5
Sp1g34440 Schrenkiella parvula HOM05D002028 ORTHO05D002474 5.5e-06 54.7 73 38.4
BolC6t35312H Brassica oleracea HOM05D002028 ORTHO05D002474 7.2e-06 54.3 73 38.4


User provided reference genes

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