Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 2.7e-152 542.0 273 100.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.3e-125 453.4 276 80.8
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 3.9e-119 431.8 249 82.7
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.1e-116 422.2 260 78.5
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 2.9e-114 415.6 267 76.4
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 8.5e-114 414.1 250 78.0
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.4e-113 413.3 287 73.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.9e-113 412.9 287 73.2
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.2e-112 410.2 245 79.2
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.1e-112 409.5 260 77.7
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 1.4e-111 406.8 272 73.9
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.8e-111 406.4 276 72.1
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 2.3e-111 406.0 259 76.4
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 5.1e-111 404.8 246 78.5
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 4.4e-110 401.7 270 71.1
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 5.7e-110 401.4 279 70.6
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 7.4e-110 401.0 243 78.2
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 9.7e-110 400.6 271 72.0
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.3e-109 400.2 260 75.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.7e-109 399.8 245 78.8
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.2e-109 399.4 262 73.7
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.7e-109 398.7 277 72.6
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 3.7e-109 398.7 261 75.1
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 4.8e-109 398.3 271 72.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 8.2e-109 397.5 250 74.4
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.1e-108 397.1 271 71.6
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.1e-108 397.1 271 70.8
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.4e-108 396.7 259 75.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.4e-108 396.7 268 70.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.8e-108 396.4 250 74.4
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.1e-108 395.6 270 70.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 4.1e-108 395.2 276 70.7
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 4.1e-108 395.2 271 72.0
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.1e-108 395.2 279 69.2
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 5.3e-108 394.8 263 74.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 5.3e-108 394.8 246 76.4
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 9.1e-108 394.0 273 71.8
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 9.1e-108 394.0 246 74.8
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.2e-107 393.7 264 72.3
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.0e-107 392.9 273 71.1
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 2.6e-107 392.5 257 74.3
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.6e-107 392.5 262 72.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 5.9e-107 391.3 256 73.8
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 5.9e-107 391.3 275 69.5
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 7.7e-107 391.0 227 82.8
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 7.7e-107 391.0 282 68.1
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.0e-106 390.6 257 73.9
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 2.2e-106 389.4 262 70.6
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 6.5e-106 387.9 261 73.6
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 6.5e-106 387.9 261 73.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 6.5e-106 387.9 272 70.6
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.4e-105 386.7 243 75.3
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.4e-105 386.7 243 75.3
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.9e-105 386.3 262 73.3
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.9e-105 386.3 273 70.0
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.5e-105 386.0 268 69.0
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 4.2e-105 385.2 243 74.9
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.2e-105 385.2 253 76.7
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 5.5e-105 384.8 276 69.9
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 5.5e-105 384.8 276 69.9
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 5.5e-105 384.8 276 69.9
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 8.0e-104 380.9 263 69.6
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 1.1e-100 370.5 256 72.3
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 1.8e-100 369.8 270 69.3
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.1e-100 368.6 255 72.9
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 4.5e-99 365.2 296 63.5
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.2e-97 358.6 217 77.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 9.4e-97 357.5 250 71.6
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.4e-95 353.6 261 67.0
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 4.0e-95 352.1 218 78.9
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 5.2e-95 351.7 240 72.1
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.5e-91 339.0 268 62.3
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 5.9e-91 338.2 233 70.0
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.8e-90 335.5 331 53.5
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.2e-88 330.5 227 69.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.6e-88 328.9 209 74.2
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 4.7e-88 328.6 213 76.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 6.1e-88 328.2 203 76.4
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 8.3e-85 317.8 264 57.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.4e-84 317.0 199 74.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.8e-84 316.6 248 62.5
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 5.0e-82 308.5 193 75.6
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.2e-80 303.9 255 62.7
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.6e-80 303.5 262 59.2
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.4e-79 300.4 258 56.2
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.4e-78 295.4 167 80.8
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.2e-76 289.3 260 55.0
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.0e-74 284.3 286 53.5
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.3e-74 283.9 187 72.2
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.9e-74 282.7 246 55.3
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.0e-74 282.0 180 75.6
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 6.4e-69 265.0 224 61.6
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 6.0e-67 258.5 234 54.3
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.7e-66 256.9 180 65.6
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.1e-65 254.2 207 64.3
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.2e-64 250.8 181 68.0
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.2e-63 245.4 255 51.8
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 6.4e-61 238.4 195 61.0
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 4.4e-46 189.1 127 66.9
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 2.9e-45 186.4 136 65.4
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.6e-43 180.6 253 45.1
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 9.6e-33 144.8 90 78.9
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.6e-32 144.1 90 77.8
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.5e-30 137.5 104 65.4
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.7e-27 126.7 108 52.8
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-24 116.7 121 51.2
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.1e-23 114.8 124 51.6
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 8.4e-21 105.1 56 87.5
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.7e-19 100.1 98 51.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.5e-17 94.4 83 55.4
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 1.3e-16 91.3 60 76.7
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 3.4e-14 83.2 164 32.3
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 6.1e-11 72.4 41 78.0
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.9e-09 67.4 47 66.0
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 9.7e-09 65.1 49 65.3
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.6e-08 64.3 105 38.1


User provided reference genes

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