Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.9e-74 281.2 157 100.0
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 8.0e-16 87.8 93 51.6
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.4e-15 87.0 103 51.5
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 7.5e-14 81.3 96 51.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.7e-13 80.1 104 48.1
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 2.2e-13 79.7 96 50.0
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.8e-13 79.3 100 47.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 2.8e-13 79.3 107 47.7
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 8.3e-13 77.8 81 53.1
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 8.3e-13 77.8 100 49.0
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 8.3e-13 77.8 99 43.4
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 4.1e-12 75.5 96 46.9
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 4.1e-12 75.5 93 47.3
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 5.4e-12 75.1 97 47.4
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 5.4e-12 75.1 97 45.4
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 9.2e-12 74.3 103 46.6
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.2e-11 73.9 97 45.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.2e-11 73.9 97 46.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.2e-11 73.9 104 45.2
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.7e-11 72.8 94 45.7
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.7e-11 72.8 95 46.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 4.5e-11 72.0 99 45.5
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 4.5e-11 72.0 95 46.3
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 7.8e-11 71.2 89 46.1
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 7.8e-11 71.2 103 42.7
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.0e-10 70.9 98 43.9
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.0e-10 70.9 101 45.5
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 1.3e-10 70.5 97 45.4
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.3e-10 70.5 96 46.9
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.7e-10 70.1 96 46.9
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.7e-10 70.1 95 46.3
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.3e-10 69.7 94 45.7
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.3e-10 69.7 94 45.7
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 2.3e-10 69.7 91 45.1
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.9e-10 69.3 107 46.7
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 2.9e-10 69.3 91 44.0
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.8e-10 68.9 92 45.7
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 5.0e-10 68.6 101 42.6
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 6.6e-10 68.2 104 40.4
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 8.6e-10 67.8 107 45.8
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.1e-09 67.4 109 45.0
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.5e-09 67.0 117 40.2
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.9e-09 66.6 110 40.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 2.5e-09 66.2 96 44.8
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 2.5e-09 66.2 111 41.4
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.5e-09 66.2 111 41.4
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.5e-09 66.2 105 41.9
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.3e-09 65.9 111 41.4
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.3e-09 65.9 93 44.1
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 5.6e-09 65.1 92 48.9
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.6e-09 65.1 94 41.5
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.6e-09 65.1 96 44.8
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 5.6e-09 65.1 95 44.2
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 7.3e-09 64.7 93 39.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 9.5e-09 64.3 109 40.4
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.2e-08 63.9 107 40.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.6e-08 63.5 112 40.2
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.8e-08 62.8 99 42.4
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 2.8e-08 62.8 98 36.7
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 3.6e-08 62.4 89 43.8
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 4.7e-08 62.0 103 42.7
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 8.0e-08 61.2 103 35.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.0e-07 60.8 99 41.4
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.4e-07 60.5 99 40.4
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.8e-07 60.1 79 49.4
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 3.0e-07 59.3 102 39.2
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 4.0e-07 58.9 99 39.4
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 8.9e-07 57.8 90 43.3
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.2e-06 57.4 102 39.2
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.2e-06 57.4 99 39.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.2e-06 57.4 96 37.5
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.5e-06 57.0 99 39.4
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 1.5e-06 57.0 99 40.4
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.5e-06 57.0 94 38.3
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.5e-06 57.0 130 33.1
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.5e-06 57.0 130 33.1
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.5e-06 57.0 78 47.4
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.6e-06 56.2 97 40.2
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 4.4e-06 55.5 102 36.3
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 4.4e-06 55.5 110 32.7
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.8e-06 55.1 73 45.2
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 7.5e-06 54.7 92 38.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 7.5e-06 54.7 96 37.5
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 7.5e-06 54.7 109 38.5
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.8e-06 54.3 87 35.6


User provided reference genes

Program Settings