Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0888 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 2.3e-63 245.4 121 100.0
CDE11G1133 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 8.3e-37 157.1 143 61.5
TAR622G0464 Trochodendron aralioides HOM05D003846 ORTHO05D004726 6.1e-32 141.0 141 52.5
TAR374G1390 Trochodendron aralioides HOM05D003846 ORTHO05D004726 6.8e-31 137.5 141 52.5
Duzib251G0345 Durio zibethinus HOM05D003846 ORTHO05D004726 7.5e-30 134.0 140 52.1
Sc04g0006620 Simmondsia chinensis HOM05D003846 ORTHO05D004726 9.8e-30 133.7 141 53.9
CANSAT64G1970 Cannabis sativa HOM05D003846 ORTHO05D004726 1.8e-28 129.4 141 49.6
Prupe.1G306800 Prunus persica HOM05D003846 ORTHO05D004726 1.8e-28 129.4 142 51.4
Gohir.A13G053526 Gossypium hirsutum HOM05D003846 ORTHO05D004726 2.4e-28 129.0 141 48.9
MBI19_g21095_MAGBIO Magnolia biondii HOM05D003846 ORTHO05D004726 2.4e-28 129.0 142 52.1
CSS0029565 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 4.1e-28 128.3 142 50.7
Gohir.D13G070700 Gossypium hirsutum HOM05D003846 ORTHO05D004726 5.4e-28 127.9 141 48.2
PSO782G3649 Papaver somniferum HOM05D003846 ORTHO05D004726 7.0e-28 127.5 142 50.0
ATR0665G367 Amborella trichopoda HOM05D003846 ORTHO05D004726 9.2e-28 127.1 141 50.4
Duzib204G0001 Durio zibethinus HOM05D003846 ORTHO05D004726 9.2e-28 127.1 141 48.2
Gorai.013G080600 Gossypium raimondii HOM05D003846 ORTHO05D004726 9.2e-28 127.1 141 48.9
PSO063G1115 Papaver somniferum HOM05D003846 ORTHO05D004726 9.2e-28 127.1 142 49.3
Manes.06G071100 Manihot esculenta HOM05D003846 ORTHO05D004726 1.6e-27 126.3 141 50.4
Potri.010G128500 Populus trichocarpa HOM05D003846 ORTHO05D004726 1.6e-27 126.3 143 50.3
ClCG05G022950 Citrullus lanatus HOM05D003846 ORTHO05D004726 2.0e-27 125.9 141 49.6
Gohir.D13G070400 Gossypium hirsutum HOM05D003846 ORTHO05D004726 2.0e-27 125.9 141 48.9
MD16G1046400 Malus domestica HOM05D003846 ORTHO05D004726 2.0e-27 125.9 141 50.4
Duzib248G0399 Durio zibethinus HOM05D003846 ORTHO05D004726 2.7e-27 125.6 141 48.2
Sed0019100 Sechium edule HOM05D003846 ORTHO05D004726 2.7e-27 125.6 141 48.2
Cpa.g.sc1.209 Carica papaya HOM05D003846 ORTHO05D004726 3.5e-27 125.2 141 50.4
Gohir.A13G053470 Gossypium hirsutum HOM05D003846 ORTHO05D004726 3.5e-27 125.2 141 48.9
MELO3C012223.2 Cucumis melo HOM05D003846 ORTHO05D004726 5.9e-27 124.4 141 48.9
Gorai.013G080900 Gossypium raimondii HOM05D003846 ORTHO05D004726 7.8e-27 124.0 141 47.5
Lalb_Chr17g0341961 Lupinus albus HOM05D003846 ORTHO05D004726 1.7e-26 122.9 141 48.2
THA.LOC104821956 Tarenaya hassleriana HOM05D003846 ORTHO05D004726 1.7e-26 122.9 141 48.2
CiPaw.16G084800 Carya illinoinensis HOM05D003846 ORTHO05D004726 2.3e-26 122.5 142 52.1
Dinv07363 Davidia involucrata HOM05D003846 ORTHO05D004726 2.3e-26 122.5 142 49.3
TWI79G0122 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 3.0e-26 122.1 141 47.5
MD13G1045100 Malus domestica HOM05D003846 ORTHO05D004726 3.9e-26 121.7 141 48.9
Haze_18631 Corylus avellana HOM05D003846 ORTHO05D004726 5.0e-26 121.3 143 50.3
Dinv21120 Davidia involucrata HOM05D003846 ORTHO05D004726 5.0e-26 121.3 143 49.7
Nn3g17770 Nelumbo nucifera HOM05D003846 ORTHO05D004726 6.6e-26 120.9 142 49.3
CSS0009272 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 8.6e-26 120.6 141 48.2
EL10Ac6g14463 Beta vulgaris HOM05D003846 ORTHO05D004726 1.1e-25 120.2 141 47.5
Hund25092 Selenicereus undatus HOM05D003846 ORTHO05D004726 1.1e-25 120.2 141 51.1
PGSC0003DMG400005627 Solanum tuberosum HOM05D003846 ORTHO05D004726 1.1e-25 120.2 141 48.2
Cfa019801 Carpinus fangiana HOM05D003846 ORTHO05D004726 1.9e-25 119.4 143 49.7
Lalb_Chr10g0099871 Lupinus albus HOM05D003846 ORTHO05D004726 2.5e-25 119.0 141 47.5
Solyc03g119700.3 Solanum lycopersicum HOM05D003846 ORTHO05D004726 2.5e-25 119.0 141 47.5
Sopen03g038530 Solanum pennellii HOM05D003846 ORTHO05D004726 2.5e-25 119.0 141 47.5
Aqoxy3G00349 Aquilegia oxysepala HOM05D003846 ORTHO05D004726 3.3e-25 118.6 142 47.9
Atru.chr11.1333 Acer truncatum HOM05D003846 ORTHO05D004726 4.3e-25 118.2 141 47.5
Nitab4.5_0001599g0080 Nicotiana tabacum HOM05D003846 ORTHO05D004726 4.3e-25 118.2 141 48.2
TWI31G0653 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 4.3e-25 118.2 138 47.8
CiPaw.15G127700 Carya illinoinensis HOM05D003846 ORTHO05D004726 9.5e-25 117.1 142 49.3
Glyma.02G098100 Glycine max HOM05D003846 ORTHO05D004726 9.5e-25 117.1 141 50.4
Actinidia35079 Actinidia chinensis HOM05D003846 ORTHO05D004726 2.1e-24 115.9 142 46.5
Thhalv10019264m.g Eutrema salsugineum HOM05D003846 ORTHO05D004726 3.6e-24 115.2 141 46.1
Nitab4.5_0010565g0020 Nicotiana tabacum HOM05D003846 ORTHO05D004726 3.6e-24 115.2 141 46.8
Glyma.01G084700 Glycine max HOM05D003846 ORTHO05D004726 6.2e-24 114.4 141 49.6
Peaxi162Scf00015g00824 Petunia axillaris HOM05D003846 ORTHO05D004726 6.2e-24 114.4 141 46.8
Sp5g23760 Schrenkiella parvula HOM05D003846 ORTHO05D004726 6.2e-24 114.4 141 44.7
Phvul.003G028500 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 1.0e-23 113.6 141 48.2
VMungo1215G1161 Vigna mungo HOM05D003846 ORTHO05D004726 1.8e-23 112.8 141 48.9
AUR62002909 Chenopodium quinoa HOM05D003846 ORTHO05D004726 2.3e-23 112.5 141 48.2
Dinv40424 Davidia involucrata HOM05D003846 ORTHO05D004726 2.3e-23 112.5 142 47.2
Actinidia31024 Actinidia chinensis HOM05D003846 ORTHO05D004726 3.1e-23 112.1 141 45.4
arahy.Tifrunner.gnm1.ann1.72UZVS Arachis hypogaea HOM05D003846 ORTHO05D004726 3.1e-23 112.1 141 47.5
HPP92_016288 Vanilla planifolia HOM05D003846 ORTHO05D004726 3.1e-23 112.1 141 46.8
RcHm_v2.0_Chr4g0435651 Rosa chinensis HOM05D003846 ORTHO05D004726 4.0e-23 111.7 140 45.0
HPP92_016307 Vanilla planifolia HOM05D003846 ORTHO05D004726 6.8e-23 110.9 141 45.4
ClCG04G011240 Citrullus lanatus HOM05D003846 ORTHO05D004726 8.9e-23 110.5 142 46.5
QL10p023733 Quercus lobata HOM05D003846 ORTHO05D004726 1.2e-22 110.2 165 43.6
CAN.G438.125 Capsicum annuum HOM05D003846 ORTHO05D004726 2.0e-22 109.4 141 44.0
Sed0009794 Sechium edule HOM05D003846 ORTHO05D004726 2.0e-22 109.4 141 46.1
Ah.02g127070 Amaranthus hybridus HOM05D003846 ORTHO05D004726 2.6e-22 109.0 143 46.2
Ah.03g137840 Amaranthus hybridus HOM05D003846 ORTHO05D004726 4.4e-22 108.2 141 45.4
DCAR_023191 Daucus carota HOM05D003846 ORTHO05D004726 4.4e-22 108.2 141 44.0
arahy.Tifrunner.gnm1.ann1.6C9V7B Arachis hypogaea HOM05D003846 ORTHO05D004726 5.8e-22 107.8 141 45.4
BolC2t08590H Brassica oleracea HOM05D003846 ORTHO05D004726 7.5e-22 107.5 142 44.4
A02p15260 Brassica napus HOM05D003846 ORTHO05D004726 9.8e-22 107.1 142 44.4
BraA02t06588Z Brassica rapa HOM05D003846 ORTHO05D004726 9.8e-22 107.1 142 44.4
BraA07t30817Z Brassica rapa HOM05D003846 ORTHO05D004726 9.8e-22 107.1 143 43.4
Medtr5g054770 Medicago truncatula HOM05D003846 ORTHO05D004726 9.8e-22 107.1 141 44.7
Lj2g0005403 Lotus japonicus HOM05D003846 ORTHO05D004726 1.3e-21 106.7 141 44.7
AT1G68660 Arabidopsis thaliana HOM05D003846 ORTHO05D004726 1.7e-21 106.3 142 43.7
AL2G27580 Arabidopsis lyrata HOM05D003846 ORTHO05D004726 2.2e-21 105.9 142 43.0
Cc04_g07410 Coffea canephora HOM05D003846 ORTHO05D004726 2.2e-21 105.9 141 42.6
CARHR061470 Cardamine hirsuta HOM05D003846 ORTHO05D004726 3.7e-21 105.1 143 42.7
BcaC08g45948 Brassica carinata HOM05D003846 ORTHO05D004726 4.9e-21 104.8 144 43.8
MELO3C002078.2 Cucumis melo HOM05D003846 ORTHO05D004726 6.4e-21 104.4 142 43.7
BcaB05g24403 Brassica carinata HOM05D003846 ORTHO05D004726 8.3e-21 104.0 142 44.4
Carub.0002s1520 Capsella rubella HOM05D003846 ORTHO05D004726 8.3e-21 104.0 142 41.5
MSTRG.9269 Avicennia marina HOM05D003846 ORTHO05D004726 1.1e-20 103.6 142 47.2
A07p31880 Brassica napus HOM05D003846 ORTHO05D004726 1.4e-20 103.2 144 43.1
PGR044G0282 Punica granatum HOM05D003846 ORTHO05D004726 1.9e-20 102.8 142 44.4
Sed0022338 Sechium edule HOM05D003846 ORTHO05D004726 1.9e-20 102.8 142 43.7
C06p37450 Brassica napus HOM05D003846 ORTHO05D004726 2.4e-20 102.4 144 43.1
BolC6t38848H Brassica oleracea HOM05D003846 ORTHO05D004726 2.4e-20 102.4 144 43.1
CsaV3_1G006510 Cucumis sativus L. HOM05D003846 ORTHO05D004726 2.4e-20 102.4 142 43.0
BcaB03g15438 Brassica carinata HOM05D003846 ORTHO05D004726 3.2e-20 102.1 147 43.5
Ciclev10032968m.g Citrus clementina HOM05D003846 ORTHO05D004726 3.2e-20 102.1 141 43.3
unitig_21.g20429 Utricularia gibba HOM05D003846 ORTHO05D004726 3.2e-20 102.1 149 43.0
GSVIVG01008253001 Vitis vinifera HOM05D003846 ORTHO05D004726 3.2e-20 102.1 141 42.6
Prupe.5G218600 Prunus persica HOM05D003846 ORTHO05D004726 2.0e-19 99.4 139 42.4
Psat2g088560 Pisum sativum HOM05D003846 ORTHO05D004726 2.7e-19 99.0 120 47.5
Nn4g23759 Nelumbo nucifera HOM05D003846 ORTHO05D004726 6.0e-19 97.8 71 63.4
TPR.G38292 Trifolium pratense HOM05D003846 ORTHO05D004726 1.0e-18 97.1 120 46.7
RcHm_v2.0_Chr7g0184811 Rosa chinensis HOM05D003846 ORTHO05D004726 1.3e-18 96.7 139 40.3
Lj2g0006290 Lotus japonicus HOM05D003846 ORTHO05D004726 1.7e-18 96.3 143 41.3
MD14G1223300 Malus domestica HOM05D003846 ORTHO05D004726 1.7e-18 96.3 139 41.0
Lalb_Chr14g0371301 Lupinus albus HOM05D003846 ORTHO05D004726 2.3e-18 95.9 142 40.8
Eucgr.K02665 Eucalyptus grandis HOM05D003846 ORTHO05D004726 3.0e-18 95.5 142 44.4
Glyma.07G089500 Glycine max HOM05D003846 ORTHO05D004726 3.0e-18 95.5 143 41.3
Glyma.09G187300 Glycine max HOM05D003846 ORTHO05D004726 3.0e-18 95.5 143 41.3
arahy.Tifrunner.gnm1.ann1.5K2M2S Arachis hypogaea HOM05D003846 ORTHO05D004726 5.0e-18 94.7 144 41.0
arahy.Tifrunner.gnm1.ann1.5U1FHR Arachis hypogaea HOM05D003846 ORTHO05D004726 5.0e-18 94.7 144 41.0
FvH4_5g12540 Fragaria vesca HOM05D003846 ORTHO05D004726 5.0e-18 94.7 139 38.8
FAN04G0089 Fragaria x ananassa HOM05D003846 ORTHO05D004726 5.0e-18 94.7 139 38.8
FAN18G2095 Fragaria x ananassa HOM05D003846 ORTHO05D004726 5.0e-18 94.7 139 38.8
FAN18G2723 Fragaria x ananassa HOM05D003846 ORTHO05D004726 5.0e-18 94.7 139 38.8
Zm00001eb041630 Zea mays HOM05D003846 ORTHO05D004726 5.0e-18 94.7 141 41.8
FAN08G1200 Fragaria x ananassa HOM05D003846 ORTHO05D004726 6.6e-18 94.4 139 38.1
Phvul.004G160300 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 6.6e-18 94.4 142 40.1
HanXRQChr06g0171111 Helianthus annuus HOM05D003846 ORTHO05D004726 8.6e-18 94.0 142 41.5
FAN13G1296 Fragaria x ananassa HOM05D003846 ORTHO05D004726 1.1e-17 93.6 140 39.3
CsaV3_5G034070 Cucumis sativus L. HOM05D000040 ORTHO05D000759 1.9e-17 92.8 71 62.0
SEGI_01063 Sequoiadendron giganteum HOM05D003846 ORTHO05D004726 1.9e-17 92.8 141 38.3
TPR.G9001 Trifolium pratense HOM05D003846 ORTHO05D004726 1.9e-17 92.8 135 44.4
Medtr6g085050 Medicago truncatula HOM05D003846 ORTHO05D004726 4.3e-17 91.7 133 44.4
ECA246G4193 Erigeron canadensis HOM05D003846 ORTHO05D004726 7.3e-17 90.9 142 42.3
SalBow1G4777 Salvia bowleyana HOM05D003846 ORTHO05D004726 7.3e-17 90.9 120 45.8
Manes.14G098800 Manihot esculenta HOM05D003846 ORTHO05D004726 9.5e-17 90.5 103 50.5
Psat1g039320 Pisum sativum HOM05D003846 ORTHO05D004726 1.2e-16 90.1 133 44.4
VMungo0464G1055 Vigna mungo HOM05D003846 ORTHO05D004726 1.2e-16 90.1 142 37.3
AUR62035268 Chenopodium quinoa HOM05D003846 ORTHO05D004726 2.1e-16 89.4 121 47.1
vmacro16453 Vaccinium macrocarpon HOM05D003846 ORTHO05D004726 2.8e-16 89.0 196 33.7
CSS0028088 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 3.6e-16 88.6 103 49.5
Lsat_1_v5_gn_3_40660 Lactuca sativa HOM05D003846 ORTHO05D004726 3.6e-16 88.6 143 43.4
Potri.008G117800 Populus trichocarpa HOM05D003846 ORTHO05D004726 6.2e-16 87.8 103 49.5
Thecc.02G359500 Theobroma cacao HOM05D003846 ORTHO05D004726 6.2e-16 87.8 103 48.5
Zm00001eb179570 Zea mays HOM05D003846 ORTHO05D004726 1.4e-15 86.7 143 39.9
BcaC03g14976 Brassica carinata HOM05D003846 ORTHO05D004726 1.8e-15 86.3 121 44.6
GSVIVG01011936001 Vitis vinifera HOM05D003846 ORTHO05D004726 1.8e-15 86.3 116 43.1
BcaB03g15443 Brassica carinata HOM05D003846 ORTHO05D004726 2.3e-15 85.9 123 43.9
COL.COLO4_07882 Corchorus olitorius HOM05D000199 ORTHO05D000550 2.3e-15 85.9 108 46.3
Os08g0432500 Oryza sativa ssp. japonica HOM05D003846 ORTHO05D004726 2.3e-15 85.9 143 39.2
Sabra10G0097700 Salix brachista HOM05D003846 ORTHO05D004726 5.2e-15 84.7 103 47.6
C02p25100 Brassica napus HOM05D003846 ORTHO05D004726 8.9e-15 84.0 120 44.2
Actinidia39818 Actinidia chinensis HOM05D003846 ORTHO05D004726 1.5e-14 83.2 103 46.6
AagrBONN_evm.TU.Sc2ySwM_369.545 Anthoceros agrestis HOM05D003846 ORTHO05D004726 2.0e-14 82.8 134 38.8
unitig_744.g24407 Utricularia gibba HOM05D003846 ORTHO05D004726 2.6e-14 82.4 150 39.3
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 3.4e-14 82.0 108 44.4
Lj9A429T51 Lonicera japonica HOM05D003846 ORTHO05D004726 4.4e-14 81.6 128 44.5
Oeu024319.1 Olea europaea HOM05D003846 ORTHO05D004726 4.4e-14 81.6 101 49.5
Mapoly0068s0048 Marchantia polymorpha HOM05D003846 ORTHO05D004726 1.1e-12 77.0 101 47.5
Lj6A764T53 Lonicera japonica HOM05D003846 ORTHO05D004726 1.4e-12 76.6 119 40.3
SGA_v2.0_scaffold63G21786 Striga asiatica HOM05D003846 ORTHO05D004726 4.1e-12 75.1 110 40.0
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 1.2e-11 73.6 124 39.5
Pp3c10_21560 Physcomitrium patens HOM05D003846 ORTHO05D004726 1.6e-11 73.2 100 40.0
Migut.D01214 Erythranthe guttata HOM05D003846 ORTHO05D004726 4.6e-11 71.6 99 46.5
Pp3c20_21920 Physcomitrium patens HOM05D003846 ORTHO05D004726 1.3e-10 70.1 99 37.4
SMO356G0199 Selaginella moellendorffii HOM05D003846 ORTHO05D004726 3.3e-09 65.5 96 44.8
HPP92_027194 Vanilla planifolia HOM05D003846 ORTHO05D004726 8.9e-07 57.4 116 31.9


User provided reference genes

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