Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0818 Ceratophyllum demersum HOM05D003087 ORTHO05D003312 7.1e-220 766.9 376 100.0
TAR629G3015 Trochodendron aralioides HOM05D003087 ORTHO05D003312 1.4e-18 98.2 233 28.3
Nn1g07083 Nelumbo nucifera HOM05D000576 ORTHO05D003312 2.4e-18 97.4 235 28.1
TAR362G1194 Trochodendron aralioides HOM05D000576 ORTHO05D003312 3.5e-17 93.6 233 31.3
TAR626G0505 Trochodendron aralioides HOM05D003087 ORTHO05D003312 5.0e-16 89.7 231 26.8
MBI02_g29707_MAGBIO Magnolia biondii HOM05D003087 ORTHO05D003312 1.2e-14 85.1 144 34.0
Prupe.4G208100 Prunus persica HOM05D003087 ORTHO05D003312 6.2e-14 82.8 220 29.5
TWI38G0929 Tripterygium wilfordii HOM05D003087 ORTHO05D003312 8.1e-14 82.4 227 26.4
Cpa.g.sc8.221 Carica papaya HOM05D003087 ORTHO05D003312 4.0e-13 80.1 239 27.2
Actinidia05111 Actinidia chinensis HOM05D003087 ORTHO05D003312 3.4e-12 77.0 243 26.3
Psat6g174320 Pisum sativum HOM05D003087 ORTHO05D003312 1.7e-11 74.7 224 24.6
CsaV3_2G008790 Cucumis sativus L. HOM05D003087 ORTHO05D003312 2.2e-11 74.3 222 22.1
MELO3C003962.2 Cucumis melo HOM05D003087 ORTHO05D003312 3.7e-11 73.6 222 22.1
Glyma.10G200400 Glycine max HOM05D003087 ORTHO05D003312 3.7e-11 73.6 223 23.3
CDE05G1832 Ceratophyllum demersum HOM05D000051 ORTHO05D000493 6.4e-11 72.8 226 27.4
LjContig00310g0015993 Lotus japonicus HOM05D003087 ORTHO05D003312 6.4e-11 72.8 232 22.8
Hma1.2p1_0106F.1_g050990 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 8.3e-11 72.4 249 28.5
Ciclev10010779m.g Citrus clementina HOM05D003087 ORTHO05D003312 1.4e-10 71.6 229 25.3
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 1.4e-10 71.6 226 27.4
CDE02G0635 Ceratophyllum demersum HOM05D000312 ORTHO05D000493 2.4e-10 70.9 226 25.7
Psat6g174360 Pisum sativum HOM05D003087 ORTHO05D003312 3.2e-10 70.5 216 25.0
Prupe.4G208200 Prunus persica HOM05D003087 ORTHO05D003312 5.4e-10 69.7 221 28.5
Rhsim13G0172100 Rhododendron simsii HOM05D001396 ORTHO05D000493 5.4e-10 69.7 233 25.8
Medtr3g448340 Medicago truncatula HOM05D003087 ORTHO05D003312 7.1e-10 69.3 224 25.9
TAR629G2777 Trochodendron aralioides HOM05D003087 ORTHO05D003312 7.1e-10 69.3 245 24.9
MD11G1223200 Malus domestica HOM05D003087 ORTHO05D003312 1.2e-09 68.6 218 25.2
QL08p012142 Quercus lobata HOM05D003087 ORTHO05D003312 1.2e-09 68.6 233 24.0
Psat5g183360 Pisum sativum HOM05D003087 ORTHO05D003312 2.7e-09 67.4 225 26.2
Aqoxy1G01400 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 3.5e-09 67.0 222 24.8
BcaNung03627 Brassica carinata HOM05D002909 ORTHO05D000493 3.5e-09 67.0 232 24.6
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 3.5e-09 67.0 254 24.8
Haze_13435 Corylus avellana HOM05D001396 ORTHO05D000493 3.5e-09 67.0 253 23.3
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 3.5e-09 67.0 233 24.0
Prupe.4G208300 Prunus persica HOM05D003087 ORTHO05D003312 3.5e-09 67.0 223 25.6
PGSC0003DMG400021415 Solanum tuberosum HOM05D001396 ORTHO05D000493 3.5e-09 67.0 235 20.9
Duzib268G1323 Durio zibethinus HOM05D003087 ORTHO05D003312 4.6e-09 66.6 228 25.4
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 4.6e-09 66.6 233 24.5
Lj1g0002440 Lotus japonicus HOM05D003087 ORTHO05D003312 6.0e-09 66.2 225 24.4
Sed0009684 Sechium edule HOM05D001396 ORTHO05D000493 7.8e-09 65.9 242 26.9
MD03G1208600 Malus domestica HOM05D003087 ORTHO05D003312 1.3e-08 65.1 223 24.7
PGSC0003DMG400017472 Solanum tuberosum HOM05D001396 ORTHO05D000493 1.3e-08 65.1 253 23.7
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.7e-08 64.7 254 24.4
Sopen02g036860 Solanum pennellii HOM05D001396 ORTHO05D000493 1.7e-08 64.7 235 21.3
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 1.7e-08 64.7 223 26.5
Thhalv10015785m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.0e-08 63.9 240 27.9
Rhsim13G0173300 Rhododendron simsii HOM05D001396 ORTHO05D000493 3.0e-08 63.9 223 24.2
Thhalv10027555m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.9e-08 63.5 238 26.9
Os11g0533800 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D000368 3.9e-08 63.5 236 25.4
Solyc02g092290.4 Solanum lycopersicum HOM05D001396 ORTHO05D000493 3.9e-08 63.5 235 21.3
Manes.15G079800 Manihot esculenta HOM05D003087 ORTHO05D003312 5.1e-08 63.2 232 24.1
Ciclev10025281m.g Citrus clementina HOM05D001477 ORTHO05D001182 8.6e-08 62.4 243 26.3
Rhsim06G0214600 Rhododendron simsii HOM05D003087 ORTHO05D003312 8.6e-08 62.4 239 23.4
Rhsim13G0171900 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.1e-07 62.0 233 21.9
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 1.5e-07 61.6 221 25.8
Cfa015667 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.5e-07 61.6 236 22.5
Dinv40495 Davidia involucrata HOM05D000051 ORTHO05D000493 1.5e-07 61.6 225 25.3
Glyma.09G102300 Glycine max HOM05D003087 ORTHO05D003312 1.5e-07 61.6 237 22.8
Hma1.2p1_0189F.1_g082790 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.5e-07 61.6 396 22.0
Aa31LG1G1350 Aethionema arabicum HOM05D000312 ORTHO05D000221 1.9e-07 61.2 380 22.4
AUR62014722 Chenopodium quinoa HOM05D001396 ORTHO05D000493 1.9e-07 61.2 228 21.5
Ciclev10025282m.g Citrus clementina HOM05D001477 ORTHO05D001182 1.9e-07 61.2 243 26.3
MD16G1051800 Malus domestica HOM05D000312 ORTHO05D000221 1.9e-07 61.2 410 22.9
PGSC0003DMG400023162 Solanum tuberosum HOM05D001396 ORTHO05D000493 2.5e-07 60.8 240 22.5
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.5e-07 60.8 229 23.1
Manes.15G079900 Manihot esculenta HOM05D000576 ORTHO05D003312 3.3e-07 60.5 229 23.1
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 3.3e-07 60.5 234 21.4
Rhsim13G0173400 Rhododendron simsii HOM05D001396 ORTHO05D000493 4.3e-07 60.1 253 24.9
EL10Ac8g20609 Beta vulgaris HOM05D001396 ORTHO05D000493 5.6e-07 59.7 214 20.6
Dinv15484 Davidia involucrata HOM05D001396 ORTHO05D000493 5.6e-07 59.7 254 24.4
Medtr5g080150 Medicago truncatula HOM05D003087 ORTHO05D003312 5.6e-07 59.7 348 22.1
C02p21890 Brassica napus HOM05D003087 ORTHO05D003312 7.3e-07 59.3 217 26.3
BolC2t08321H Brassica oleracea HOM05D003087 ORTHO05D003312 7.3e-07 59.3 217 26.3
BcaC03g14738 Brassica carinata HOM05D003087 ORTHO05D003312 9.5e-07 58.9 217 26.3
Sopen08g001400 Solanum pennellii HOM05D001396 ORTHO05D000493 9.5e-07 58.9 202 24.3
TPR.G2707 Trifolium pratense HOM05D000312 ORTHO05D000221 9.5e-07 58.9 220 25.5
Hma1.2p1_0189F.1_g082890 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.2e-06 58.5 414 20.0
Lj6g0025252 Lotus japonicus HOM05D003087 ORTHO05D003312 1.2e-06 58.5 240 20.0
MBI16_g01187_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 1.2e-06 58.5 166 28.3
Medtr2g048140 Medicago truncatula HOM05D003087 ORTHO05D003312 1.2e-06 58.5 225 24.4
Potri.010G134200 Populus trichocarpa HOM05D000312 ORTHO05D000221 1.2e-06 58.5 276 24.6
BcaB02g06452 Brassica carinata HOM05D000312 ORTHO05D000221 1.6e-06 58.2 398 21.9
Duzib213G0641 Durio zibethinus HOM05D003087 ORTHO05D003312 1.6e-06 58.2 129 27.9
Manes.03G127400 Manihot esculenta HOM05D003087 ORTHO05D003312 1.6e-06 58.2 228 26.3
Peaxi162Scf00548g00425 Petunia axillaris HOM05D001396 ORTHO05D000493 1.6e-06 58.2 236 20.8
TAR624G1446 Trochodendron aralioides HOM05D001396 ORTHO05D000493 1.6e-06 58.2 209 23.9
AL4G21500 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 2.1e-06 57.8 242 25.6
A02p13580 Brassica napus HOM05D003087 ORTHO05D003312 2.1e-06 57.8 241 24.9
BraA02t06416Z Brassica rapa HOM05D003087 ORTHO05D003312 2.1e-06 57.8 241 24.9
CSS0018443 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 2.1e-06 57.8 211 21.3
QL10p040220 Quercus lobata HOM05D000576 ORTHO05D000368 2.1e-06 57.8 218 22.9
TAR371G0223 Trochodendron aralioides HOM05D000312 ORTHO05D000221 2.1e-06 57.8 216 25.5
Cc05_g06370 Coffea canephora HOM05D001396 ORTHO05D000493 2.8e-06 57.4 231 23.4
Prupe.1G299200 Prunus persica HOM05D000312 ORTHO05D000221 2.8e-06 57.4 402 22.6
RhsimUnG0214200 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.8e-06 57.4 229 22.3
Sopen08g001410 Solanum pennellii HOM05D001396 ORTHO05D000493 2.8e-06 57.4 97 32.0
TAR624G0037 Trochodendron aralioides HOM05D001396 ORTHO05D000493 2.8e-06 57.4 242 24.0
BolC5t33395H Brassica oleracea HOM05D002909 ORTHO05D000493 3.6e-06 57.0 160 28.1
AUR62016903 Chenopodium quinoa HOM05D001396 ORTHO05D000493 3.6e-06 57.0 246 20.3
Thhalv10025165m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.6e-06 57.0 247 24.7
Hma1.2p1_0565F.1_g179460 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 4.7e-06 56.6 251 22.7
Lj6A770T46 Lonicera japonica HOM05D000312 ORTHO05D000221 4.7e-06 56.6 275 24.0
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 4.7e-06 56.6 229 23.6
Actinidia37828 Actinidia chinensis HOM05D000312 ORTHO05D000493 6.2e-06 56.2 225 23.6
Duzib251G0105 Durio zibethinus HOM05D000312 ORTHO05D000221 6.2e-06 56.2 402 21.9
Peaxi162Scf00548g00534 Petunia axillaris HOM05D001396 ORTHO05D000493 6.2e-06 56.2 237 22.4
PGSC0003DMG400046485 Solanum tuberosum HOM05D001396 ORTHO05D000493 6.2e-06 56.2 215 21.4
SGA_v2.0_scaffold24G10274 Striga asiatica HOM05D000312 ORTHO05D000221 6.2e-06 56.2 239 23.0
CiPaw.05G118900 Carya illinoinensis HOM05D000312 ORTHO05D000221 8.1e-06 55.8 213 27.2
MD13G1052800 Malus domestica HOM05D000312 ORTHO05D000221 8.1e-06 55.8 410 23.9
Peaxi162Scf00226g00815 Petunia axillaris HOM05D001396 ORTHO05D000493 8.1e-06 55.8 237 20.3
PGSC0003DMG401022411 Solanum tuberosum HOM05D001396 ORTHO05D000493 8.1e-06 55.8 248 21.0


User provided reference genes

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