Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 1.9e-41 172.2 92 100.0
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.8e-36 155.6 92 92.4
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.0e-15 86.7 98 55.1
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 5.2e-15 84.3 79 59.5
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.8e-15 84.0 71 62.0
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 6.8e-15 84.0 71 62.0
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 2.0e-14 82.4 103 50.5
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 2.6e-14 82.0 57 70.2
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 2.6e-14 82.0 100 55.0
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 3.4e-14 81.6 94 59.6
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 4.4e-14 81.3 57 70.2
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 9.8e-14 80.1 99 53.5
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 9.8e-14 80.1 94 54.3
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.3e-13 79.7 54 72.2
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 1.7e-13 79.3 102 52.0
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 1.7e-13 79.3 94 55.3
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.2e-13 79.0 95 54.7
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 2.8e-13 78.6 100 52.0
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 2.8e-13 78.6 94 48.9
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.8e-13 78.6 57 70.2
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 3.7e-13 78.2 74 59.5
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 4.9e-13 77.8 65 66.2
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 6.3e-13 77.4 89 48.3
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 8.3e-13 77.0 93 50.5
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 8.3e-13 77.0 98 53.1
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.1e-12 76.6 99 50.5
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.1e-12 76.6 94 47.9
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 1.4e-12 76.3 57 64.9
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 2.4e-12 75.5 92 48.9
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 2.4e-12 75.5 97 50.5
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 4.1e-12 74.7 95 52.6
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 5.4e-12 74.3 99 51.5
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 5.4e-12 74.3 101 53.5
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 5.4e-12 74.3 98 44.9
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 5.4e-12 74.3 87 49.4
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 5.4e-12 74.3 91 54.9
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 5.4e-12 74.3 92 52.2
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 5.4e-12 74.3 98 50.0
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 7.0e-12 73.9 90 52.2
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 9.2e-12 73.6 92 51.1
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 1.2e-11 73.2 75 57.3
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 1.2e-11 73.2 91 48.4
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 1.2e-11 73.2 91 48.4
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 1.6e-11 72.8 95 45.3
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.6e-11 72.8 95 49.5
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 1.6e-11 72.8 67 59.7
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 1.6e-11 72.8 65 61.5
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 1.6e-11 72.8 97 50.5
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 1.6e-11 72.8 95 54.7
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 2.0e-11 72.4 101 45.5
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 2.0e-11 72.4 73 53.4
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 2.0e-11 72.4 101 47.5
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 2.7e-11 72.0 95 46.3
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 3.5e-11 71.6 95 51.6
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 3.5e-11 71.6 104 47.1
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 5.9e-11 70.9 53 62.3
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 1.3e-10 69.7 68 57.4
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 1.3e-10 69.7 54 59.3
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.3e-10 69.7 88 53.4
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 1.7e-10 69.3 70 55.7
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 1.7e-10 69.3 78 56.4
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 1.7e-10 69.3 77 51.9
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 2.3e-10 68.9 98 48.0
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 2.9e-10 68.6 82 51.2
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 3.8e-10 68.2 75 54.7
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 5.0e-10 67.8 98 50.0
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 5.0e-10 67.8 77 54.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 6.6e-10 67.4 80 50.0
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 6.6e-10 67.4 97 52.6
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 6.6e-10 67.4 53 60.4
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 8.6e-10 67.0 100 51.0
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 8.6e-10 67.0 75 53.3
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 8.6e-10 67.0 75 53.3
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 8.6e-10 67.0 95 49.5
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 8.6e-10 67.0 75 53.3
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 8.6e-10 67.0 83 49.4
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 8.6e-10 67.0 90 55.6
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 8.6e-10 67.0 96 46.9
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.1e-09 66.6 64 57.8
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 1.9e-09 65.9 91 46.2
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 1.9e-09 65.9 94 46.8
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.9e-09 65.9 66 56.1
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 3.3e-09 65.1 69 50.7
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 3.3e-09 65.1 93 45.2
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 3.3e-09 65.1 69 50.7
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 4.3e-09 64.7 90 46.7
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 4.3e-09 64.7 95 44.2
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 4.3e-09 64.7 72 50.0
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 5.6e-09 64.3 95 48.4
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 5.6e-09 64.3 95 48.4
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.6e-08 62.8 90 52.2
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 2.1e-08 62.4 95 47.4
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 3.6e-08 61.6 81 44.4
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 3.6e-08 61.6 92 41.3
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 4.7e-08 61.2 86 45.3
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 4.7e-08 61.2 42 66.7
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 6.1e-08 60.8 55 52.7
SHI47168 Sapria himalayana HOM05D007491 ORTHO05D009489 1.4e-07 59.7 48 58.3
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 1.8e-07 59.3 95 44.2
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 3.0e-07 58.5 94 42.6
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 3.0e-07 58.5 94 45.7
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 1.2e-06 56.6 84 44.0
CsaV3_7G023550 Cucumis sativus L. HOM05D006766 ORTHO05D008534 1.2e-06 56.6 93 36.6
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 1.5e-06 56.2 85 43.5
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 3.4e-06 55.1 92 44.6
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 3.4e-06 55.1 87 44.8
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 3.4e-06 55.1 53 56.6
CDE12G0636 Ceratophyllum demersum HOM05D006762 ORTHO05D003505 3.4e-06 55.1 47 57.4
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 3.4e-06 55.1 85 38.8
Aqoxy5G01642 Aquilegia oxysepala HOM05D006766 ORTHO05D008534 4.4e-06 54.7 71 40.8
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 5.7e-06 54.3 87 44.8
FvH4_2g08780 Fragaria vesca HOM05D006766 ORTHO05D008534 9.8e-06 53.5 55 47.3
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 9.8e-06 53.5 87 41.4


User provided reference genes

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