Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0741 Ceratophyllum demersum HOM05D003067 ORTHO05D007251 1.3e-54 216.1 102 100.0
CDE04G0735 Ceratophyllum demersum HOM05D003067 ORTHO05D007251 1.3e-35 152.9 89 83.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 5.2e-32 141.0 89 75.3
Haze_19236 Corylus avellana HOM05D003067 ORTHO05D007251 1.2e-31 139.8 89 74.2
CiPaw.15G174100 Carya illinoinensis HOM05D003067 ORTHO05D007251 2.0e-31 139.0 89 75.3
Ciclev10009382m.g Citrus clementina HOM05D003067 ORTHO05D007251 2.0e-31 139.0 89 73.0
QL02p092650 Quercus lobata HOM05D003067 ORTHO05D007251 3.4e-31 138.3 89 73.0
Cc06_g15250 Coffea canephora HOM05D003067 ORTHO05D007251 5.7e-31 137.5 89 73.0
Prupe.7G259900 Prunus persica HOM05D003067 ORTHO05D007251 5.7e-31 137.5 89 71.9
Lj7P455T22 Lonicera japonica HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 73.0
Nn4g26426 Nelumbo nucifera HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 71.9
Peaxi162Scf00108g00073 Petunia axillaris HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 74.2
Peaxi162Scf00177g00916 Petunia axillaris HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 74.2
Solyc12g010220.3 Solanum lycopersicum HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 74.2
Sopen12g005110 Solanum pennellii HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 74.2
PGSC0003DMG400007895 Solanum tuberosum HOM05D003067 ORTHO05D007251 7.5e-31 137.1 89 74.2
Dinv42885 Davidia involucrata HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 74.2
Dinv43215 Davidia involucrata HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 74.2
FvH4_1g01210 Fragaria vesca HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 71.9
Rhsim01G0045000 Rhododendron simsii HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 73.0
RhsimUnG0172000 Rhododendron simsii HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 73.0
RcHm_v2.0_Chr2g0086001 Rosa chinensis HOM05D003067 ORTHO05D007251 9.8e-31 136.7 89 71.9
DCAR_014818 Daucus carota HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 70.8
Eucgr.C00365 Eucalyptus grandis HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 69.7
FvH4_1g01200 Fragaria vesca HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 71.9
FAN19G2760 Fragaria x ananassa HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 71.9
FAN23G0234 Fragaria x ananassa HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 71.9
FAN28G1587 Fragaria x ananassa HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 71.9
MD02G1010200 Malus domestica HOM05D003067 ORTHO05D007251 1.3e-30 136.3 89 71.9
CAN.G551.29 Capsicum annuum HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 73.0
Cpa.g.sc46.128 Carica papaya HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 70.8
Manes.14G111800 Manihot esculenta HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 71.9
Nitab4.5_0001478g0100 Nicotiana tabacum HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 73.0
Nitab4.5_0002315g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 73.0
THA.LOC104822364 Tarenaya hassleriana HOM05D003067 ORTHO05D007251 1.7e-30 136.0 89 71.9
Hma1.2p1_0222F.1_g093300 Hydrangea macrophylla HOM05D003067 ORTHO05D007251 2.2e-30 135.6 89 73.0
CSS0017292 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 2.8e-30 135.2 89 73.0
CSS0043589 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 2.8e-30 135.2 89 73.0
Duzib187G1913 Durio zibethinus HOM05D003067 ORTHO05D007251 3.7e-30 134.8 89 70.8
Thecc.09G033800 Theobroma cacao HOM05D003067 ORTHO05D007251 3.7e-30 134.8 89 69.7
Atru.chr7.135 Acer truncatum HOM05D003067 ORTHO05D007251 4.8e-30 134.4 89 70.8
Dinv41399 Davidia involucrata HOM05D003067 ORTHO05D007251 4.8e-30 134.4 84 76.2
Potri.018G110200 Populus trichocarpa HOM05D003067 ORTHO05D007251 4.8e-30 134.4 89 69.7
Sabra18G0093200 Salix brachista HOM05D003067 ORTHO05D007251 4.8e-30 134.4 89 69.7
Aqoxy2G01213 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 6.3e-30 134.0 89 70.8
Aqoxy5G03664 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 6.3e-30 134.0 89 70.8
MSTRG.11189 Avicennia marina HOM05D003067 ORTHO05D007251 6.3e-30 134.0 89 73.0
ClCG10G005110 Citrullus lanatus HOM05D003067 ORTHO05D007251 6.3e-30 134.0 89 70.8
Gohir.D10G035400 Gossypium hirsutum HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 69.7
Gorai.011G037200 Gossypium raimondii HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 69.7
PSO063G0174 Papaver somniferum HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 71.9
PSO063G5563 Papaver somniferum HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 71.9
PSO339G4470 Papaver somniferum HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 71.9
SGA_v2.0_scaffold223G42827 Striga asiatica HOM05D003067 ORTHO05D007251 8.3e-30 133.7 89 69.7
Actinidia04284 Actinidia chinensis HOM05D003067 ORTHO05D007251 1.4e-29 132.9 89 73.0
MD00G1161600 Malus domestica HOM05D003067 ORTHO05D007251 1.4e-29 132.9 89 70.8
PGR142G0687 Punica granatum HOM05D003067 ORTHO05D007251 1.4e-29 132.9 85 71.8
EL10Ac9g22772 Beta vulgaris HOM05D003067 ORTHO05D007251 1.8e-29 132.5 89 69.7
MELO3C014177.2 Cucumis melo HOM05D003067 ORTHO05D007251 1.8e-29 132.5 89 68.5
PSO384G1039 Papaver somniferum HOM05D003067 ORTHO05D007251 2.4e-29 132.1 89 70.8
Sed0009590 Sechium edule HOM05D003067 ORTHO05D007251 2.4e-29 132.1 89 69.7
MBI02_g23954_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 3.1e-29 131.7 89 70.8
Os04g0627200 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D007251 4.1e-29 131.3 94 67.0
TWI34G0114 Tripterygium wilfordii HOM05D003067 ORTHO05D007251 4.1e-29 131.3 89 69.7
Migut.C01262 Erythranthe guttata HOM05D003067 ORTHO05D007251 5.4e-29 131.0 89 68.5
unitig_32.g11754 Utricularia gibba HOM05D003067 ORTHO05D007251 5.4e-29 131.0 85 69.4
EL10Ac3g05662 Beta vulgaris HOM05D003067 ORTHO05D007251 7.0e-29 130.6 89 68.5
Gohir.A10G034666 Gossypium hirsutum HOM05D003067 ORTHO05D007251 7.0e-29 130.6 89 67.4
SHI31898 Sapria himalayana HOM05D003067 ORTHO05D007251 7.0e-29 130.6 95 63.2
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 9.1e-29 130.2 89 67.4
COL.COLO4_18775 Corchorus olitorius HOM05D003067 ORTHO05D007251 1.2e-28 129.8 91 67.0
CsaV3_3G004790 Cucumis sativus L. HOM05D003067 ORTHO05D007251 1.2e-28 129.8 89 66.3
MBI02_g23956_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 1.6e-28 129.4 97 66.0
Hund26544 Selenicereus undatus HOM05D003067 ORTHO05D007251 1.6e-28 129.4 85 70.6
HPP92_015883 Vanilla planifolia HOM05D003067 ORTHO05D007251 2.7e-28 128.6 90 71.1
BcaB07g31398 Brassica carinata HOM05D003067 ORTHO05D007251 3.5e-28 128.3 89 66.3
BcaC04g22483 Brassica carinata HOM05D003067 ORTHO05D007251 3.5e-28 128.3 89 67.4
C09p18790 Brassica napus HOM05D003067 ORTHO05D007251 3.5e-28 128.3 89 67.4
BolC9t54781H Brassica oleracea HOM05D003067 ORTHO05D007251 3.5e-28 128.3 89 67.4
Sp2g01250 Schrenkiella parvula HOM05D003067 ORTHO05D007251 3.5e-28 128.3 89 66.3
AL2G12000 Arabidopsis lyrata HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
AT1G63270 Arabidopsis thaliana HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
A09p15540 Brassica napus HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
BraA09t37194Z Brassica rapa HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
Carub.0002s0155 Capsella rubella HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
Thhalv10023673m.g Eutrema salsugineum HOM05D003067 ORTHO05D007251 4.5e-28 127.9 89 66.3
CARHR048140 Cardamine hirsuta HOM05D003067 ORTHO05D007251 5.9e-28 127.5 89 65.2
ECA234G4787 Erigeron canadensis HOM05D003067 ORTHO05D007251 5.9e-28 127.5 89 68.5
AUR62035264 Chenopodium quinoa HOM05D003067 ORTHO05D007251 7.7e-28 127.1 89 65.2
Oeu021254.1 Olea europaea HOM05D003067 ORTHO05D007251 1.0e-27 126.7 89 66.3
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.3e-27 126.3 89 65.2
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.3e-27 126.3 89 65.2
HanXRQChr10g0314651 Helianthus annuus HOM05D003067 ORTHO05D007251 1.7e-27 125.9 89 67.4
Ca_21111_v3 Cicer arietinum L. HOM05D003067 ORTHO05D007251 2.9e-27 125.2 89 64.0
Lj4g0016734 Lotus japonicus HOM05D003067 ORTHO05D007251 1.1e-26 123.2 89 64.0
Zm00001eb431360 Zea mays HOM05D003067 ORTHO05D007251 1.1e-26 123.2 90 66.7
Glyma.13G154800 Glycine max HOM05D003067 ORTHO05D007251 1.5e-26 122.9 89 62.9
Sc18g0006940 Simmondsia chinensis HOM05D003067 ORTHO05D007251 1.9e-26 122.5 90 66.7
TAR383G0409 Trochodendron aralioides HOM05D003067 ORTHO05D007251 1.9e-26 122.5 85 68.2
Nitab4.5_0007909g0020 Nicotiana tabacum HOM05D003067 ORTHO05D007251 2.5e-26 122.1 83 71.1
Psat4g008800 Pisum sativum HOM05D003067 ORTHO05D007251 2.5e-26 122.1 89 61.8
Zm00001eb069730 Zea mays HOM05D003067 ORTHO05D007251 2.5e-26 122.1 90 65.6
Zm00001eb069940 Zea mays HOM05D003067 ORTHO05D007251 2.5e-26 122.1 90 65.6
arahy.Tifrunner.gnm1.ann1.8U5735 Arachis hypogaea HOM05D003067 ORTHO05D007251 4.2e-26 121.3 89 64.0
VMungo1215G2568 Vigna mungo HOM05D003067 ORTHO05D007251 4.2e-26 121.3 89 61.8
Zm00001eb069870 Zea mays HOM05D003067 ORTHO05D007251 1.2e-25 119.8 90 64.4
Zm00001eb070010 Zea mays HOM05D003067 ORTHO05D007251 1.6e-25 119.4 90 64.4
GSVIVG01033294001 Vitis vinifera HOM05D003067 ORTHO05D007251 2.1e-25 119.0 89 59.6
TPR.G39220 Trifolium pratense HOM05D003067 ORTHO05D007251 2.8e-25 118.6 88 58.0
Gorai.010G111900 Gossypium raimondii HOM05D003067 ORTHO05D007251 6.1e-25 117.5 73 74.0
Lalb_Chr19g0125941 Lupinus albus HOM05D003067 ORTHO05D007251 1.8e-24 115.9 89 62.9
Nitab4.5_0001812g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 3.4e-23 111.7 83 68.7
MD15G1155200 Malus domestica HOM05D003067 ORTHO05D007251 4.4e-23 111.3 71 69.0
Zm00001eb069890 Zea mays HOM05D003067 ORTHO05D007251 3.7e-22 108.2 74 70.3
Phvul.003G157800 Phaseolus vulgaris HOM05D003067 ORTHO05D007251 6.3e-22 107.5 73 64.4
ATR0680G235 Amborella trichopoda HOM05D003067 ORTHO05D007251 3.1e-21 105.1 85 62.4
Medtr4g131330 Medicago truncatula HOM05D003067 ORTHO05D007251 4.1e-21 104.8 89 56.2
Gohir.D06G096900 Gossypium hirsutum HOM05D003067 ORTHO05D007251 6.6e-19 97.4 89 55.1
BolC1t03287H Brassica oleracea HOM05D003067 ORTHO05D007251 1.2e-17 93.2 69 60.9
Mapoly0096s0064 Marchantia polymorpha HOM05D003067 ORTHO05D007251 2.8e-17 92.0 85 47.1
SEGI_33800 Sequoiadendron giganteum HOM05D003067 ORTHO05D007251 1.1e-13 80.1 70 50.0
Pp3c16_5430 Physcomitrium patens HOM05D003067 ORTHO05D007251 1.8e-13 79.3 89 42.7
Peaxi162Scf00108g00811 Petunia axillaris HOM05D003067 ORTHO05D007251 1.2e-12 76.6 89 48.3
Actinidia38340 Actinidia chinensis HOM05D003779 ORTHO05D007251 3.6e-09 65.1 49 65.3
Oeu043498.1 Olea europaea HOM05D003067 ORTHO05D007251 1.2e-07 60.1 89 41.6


User provided reference genes

Program Settings