Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 9.5e-96 353.6 191 100.0
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.1e-51 204.5 113 88.5
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 4.4e-32 142.1 166 57.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.7e-32 141.7 175 53.7
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.0e-29 133.3 173 53.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.0e-28 131.0 171 55.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.2e-28 129.8 170 52.9
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.2e-28 129.8 173 50.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 3.8e-28 129.0 177 48.0
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 5.0e-28 128.6 173 50.3
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 8.5e-28 127.9 170 52.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.4e-27 127.1 181 46.4
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.2e-26 124.0 131 65.6
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 3.6e-26 122.5 128 64.8
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.4e-25 120.6 174 46.0
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.1e-24 117.5 126 65.9
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.5e-24 117.1 138 59.4
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.5e-24 117.1 170 51.8
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 2.0e-24 116.7 174 50.6
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.0e-24 116.7 140 60.7
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.6e-24 116.3 140 60.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.4e-24 115.5 174 51.1
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.4e-24 115.5 140 60.7
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 5.7e-24 115.2 165 49.1
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 7.4e-24 114.8 122 65.6
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 9.7e-24 114.4 123 64.2
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 9.7e-24 114.4 177 46.9
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 9.7e-24 114.4 170 48.8
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.7e-23 113.6 164 51.2
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.8e-23 112.8 125 62.4
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 2.8e-23 112.8 128 60.2
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 3.7e-23 112.5 173 48.0
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.8e-23 112.1 137 58.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 4.8e-23 112.1 125 63.2
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.8e-23 112.1 168 46.4
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 4.8e-23 112.1 156 50.6
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 6.3e-23 111.7 121 65.3
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 6.3e-23 111.7 137 59.1
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.3e-23 111.7 177 45.2
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 8.2e-23 111.3 163 53.4
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 8.2e-23 111.3 121 65.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.1e-22 110.9 82 86.6
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 1.1e-22 110.9 169 48.5
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.4e-22 110.5 115 67.0
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.4e-22 110.5 133 58.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.4e-22 110.5 82 86.6
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 1.8e-22 110.2 129 62.0
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.8e-22 110.2 128 56.2
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.4e-22 109.8 174 48.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.1e-22 109.4 119 65.5
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 3.1e-22 109.4 81 86.4
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.1e-22 109.4 110 61.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.1e-22 109.4 175 46.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.1e-22 109.4 148 52.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.1e-22 109.4 166 47.6
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 5.3e-22 108.6 121 61.2
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 9.1e-22 107.8 134 59.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 9.1e-22 107.8 176 46.6
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 9.1e-22 107.8 128 58.6
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.2e-21 107.5 123 61.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.6e-21 107.1 173 47.4
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.0e-21 106.7 81 85.2
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.5e-21 105.5 134 59.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 5.9e-21 105.1 81 81.5
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 7.7e-21 104.8 91 76.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 7.7e-21 104.8 128 58.6
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.3e-20 104.0 171 48.5
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.7e-20 103.6 81 82.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.2e-20 103.2 175 47.4
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.9e-20 102.8 169 46.7
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 5.0e-20 102.1 109 65.1
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 5.0e-20 102.1 89 73.0
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 8.5e-20 101.3 81 80.2
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.1e-19 100.9 111 66.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.1e-19 100.9 131 57.3
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.1e-19 100.9 175 47.4
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.5e-19 100.5 163 46.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 5.5e-19 98.6 123 56.1
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 9.4e-19 97.8 168 45.8
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.2e-18 97.4 110 63.6
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.2e-18 97.4 83 77.1
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.6e-18 97.1 120 56.7
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-18 96.3 129 58.1
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 3.6e-18 95.9 93 72.0
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 4.7e-18 95.5 175 41.1
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.7e-18 95.5 83 78.3
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 1.4e-17 94.0 98 66.3
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.8e-17 93.6 91 70.3
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.3e-17 93.2 172 44.8
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.3e-17 93.2 172 44.8
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.3e-17 93.2 172 44.8
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.0e-17 92.8 94 68.1
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.0e-17 92.4 94 68.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.0e-16 90.1 128 54.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 3.3e-16 89.4 171 43.9
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.3e-16 89.4 157 50.3
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.3e-15 85.1 81 67.9
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 3.1e-14 82.8 87 67.8
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.1e-14 82.4 78 64.1
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 4.1e-14 82.4 99 58.6
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 9.1e-14 81.3 78 65.4
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.5e-12 75.1 78 66.7
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.5e-12 75.1 78 66.7
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 3.4e-08 62.8 134 43.3


User provided reference genes

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