Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 0.0e+00 1303.5 648 100.0
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 6.2e-240 834.3 671 63.5
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 2.5e-233 812.4 669 62.3
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 9.0e-231 803.9 677 61.3
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 3.4e-230 802.0 667 62.2
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 5.9e-230 801.2 664 61.9
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 6.7e-226 787.7 670 60.6
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 3.3e-225 785.4 650 61.8
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 4.3e-225 785.0 660 60.0
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 1.6e-224 783.1 673 59.9
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 4.1e-223 778.5 641 60.7
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 1.2e-222 776.9 667 59.8
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.5e-222 776.5 662 58.9
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 5.9e-222 774.6 670 59.1
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 1.1e-220 770.4 667 60.9
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 7.2e-220 767.7 664 58.9
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 2.1e-219 766.1 664 59.2
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 4.6e-219 765.0 664 59.0
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 6.1e-219 764.6 664 58.7
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 7.9e-219 764.2 639 59.5
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 7.9e-219 764.2 657 58.4
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 1.4e-218 763.5 652 59.0
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 3.9e-218 761.9 640 59.7
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 6.7e-218 761.1 662 58.9
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 2.2e-216 756.1 643 59.4
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 2.2e-216 756.1 690 56.4
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 6.3e-216 754.6 642 59.3
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 1.1e-215 753.8 664 57.8
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.1e-215 751.9 664 57.7
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 9.1e-215 750.7 664 57.4
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.5e-214 750.0 672 57.1
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 2.6e-214 749.2 637 59.3
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 2.6e-214 749.2 647 58.6
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 5.9e-214 748.0 588 64.5
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 1.0e-213 747.3 665 57.4
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 2.2e-213 746.1 633 58.5
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 3.8e-213 745.3 656 57.8
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 5.0e-213 745.0 653 57.7
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.4e-212 743.4 658 57.6
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 4.2e-212 741.9 665 56.1
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 4.2e-212 741.9 640 58.0
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 5.5e-212 741.5 653 57.3
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 9.4e-212 740.7 665 57.4
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 1.2e-211 740.3 652 58.0
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.2e-211 740.3 634 58.5
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 4.7e-211 738.4 653 57.6
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 6.1e-211 738.0 665 57.6
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 1.0e-210 737.3 659 57.2
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 2.3e-210 736.1 626 59.1
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 3.9e-210 735.3 663 57.3
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 3.9e-210 735.3 662 58.2
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 5.2e-210 734.9 656 57.3
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 8.8e-210 734.2 660 57.7
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 8.8e-210 734.2 670 56.4
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 3.3e-209 732.3 658 57.0
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 3.3e-209 732.3 632 58.2
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 3.3e-209 732.3 656 57.5
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 9.7e-209 730.7 631 58.6
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 9.7e-209 730.7 634 58.2
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 1.3e-208 730.3 652 56.4
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 1.3e-208 730.3 651 58.1
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 2.2e-208 729.6 653 56.8
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 2.8e-208 729.2 664 56.3
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 4.8e-208 728.4 634 57.4
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 6.3e-208 728.0 662 55.9
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 6.3e-208 728.0 686 55.0
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 8.2e-208 727.6 631 58.2
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 8.2e-208 727.6 660 57.0
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 1.1e-207 727.2 665 55.0
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.8e-207 726.5 654 56.4
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 5.3e-207 724.9 631 58.2
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 2.0e-206 723.0 672 56.0
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 2.6e-206 722.6 628 58.6
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 3.5e-206 722.2 636 57.5
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 4.5e-206 721.8 664 55.9
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 7.7e-206 721.1 631 58.3
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 1.3e-205 720.3 672 55.8
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.3e-205 720.3 643 57.2
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 3.8e-205 718.8 668 56.1
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 3.8e-205 718.8 663 55.5
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.9e-204 716.5 631 57.8
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.2e-204 715.3 642 57.3
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 5.5e-204 714.9 635 57.5
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 9.4e-204 714.1 631 58.2
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 9.4e-204 714.1 625 58.6
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 9.4e-204 714.1 635 56.9
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 1.2e-203 713.8 643 56.1
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 2.7e-203 712.6 661 55.8
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.7e-203 712.6 602 59.1
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 2.3e-202 709.5 628 58.0
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 2.3e-202 709.5 637 57.9
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 1.2e-201 707.2 600 59.2
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 2.0e-201 706.4 646 56.7
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 1.3e-197 693.7 582 58.8
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.2e-195 687.2 692 52.9
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 8.8e-194 681.0 582 59.6
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 8.8e-194 681.0 572 58.2
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 2.4e-183 646.4 544 59.6
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.4e-183 646.4 626 54.6
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 1.8e-178 630.2 599 54.1
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 1.6e-174 617.1 558 55.7
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 5.6e-172 608.6 551 55.2
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 5.6e-156 555.4 661 46.9
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.8e-154 548.5 562 51.8
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 4.3e-148 529.3 495 55.4
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 5.6e-148 528.9 532 51.7
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.3e-131 474.6 566 46.5
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 1.9e-127 460.7 426 53.8
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 3.5e-126 456.4 453 51.2
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 5.1e-125 452.6 607 42.7
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 8.7e-117 425.2 650 39.8
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 1.1e-114 418.3 833 34.0
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 6.3e-107 392.5 555 41.4
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 2.9e-104 383.6 390 54.6
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 9.1e-90 335.5 394 45.7
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 1.0e-85 322.0 273 62.3
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 5.5e-79 299.7 196 71.4
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 1.5e-68 265.0 587 32.2
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 4.4e-68 263.5 312 44.9
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 7.8e-65 252.7 201 61.2
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 1.6e-57 228.4 217 52.1
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 7.3e-55 219.5 605 28.8
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 6.2e-54 216.5 718 28.7
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 6.8e-53 213.0 644 28.9
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 4.9e-51 206.8 226 46.0
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 8.3e-51 206.1 395 37.5
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.4e-50 204.5 371 37.7
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 2.7e-49 201.1 246 48.0
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.0e-48 199.1 275 43.6
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 9.2e-42 176.0 146 62.3
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 2.7e-41 174.5 118 69.5
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.6e-36 157.9 277 37.2
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 4.6e-33 147.1 318 30.5
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.5e-31 141.4 221 39.8
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.6e-31 139.4 221 39.4
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 9.6e-31 139.4 221 39.4
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.6e-31 139.4 221 39.4
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 9.6e-31 139.4 221 39.4
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 3.6e-30 137.5 145 45.5
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 1.8e-29 135.2 115 58.3
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 4.0e-29 134.0 123 55.3
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 4.4e-28 130.6 169 43.8
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.5e-25 120.9 165 43.0
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 6.0e-25 120.2 165 43.0
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 6.0e-25 120.2 109 61.5
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.8e-25 119.8 165 42.4
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.0e-24 117.9 165 43.0
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 9.0e-21 106.3 161 39.1
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 4.6e-17 94.0 66 72.7
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 1.8e-16 92.0 108 44.4
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 3.9e-16 90.9 66 71.2
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 3.1e-13 81.3 78 55.1
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 4.0e-13 80.9 78 55.1
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 9.3e-10 69.7 47 72.3
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 1.1e-07 62.8 40 65.0
SMO229G0017 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 6.2e-06 57.0 237 20.7


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