Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 7.0e-63 243.8 126 100.0
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 9.5e-52 206.8 122 86.1
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.4e-31 139.8 125 58.4
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 9.2e-31 137.1 127 57.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.5e-30 135.2 119 59.7
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.0e-29 132.1 117 59.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 3.9e-29 131.7 116 58.6
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.6e-29 130.6 125 56.0
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.5e-28 129.8 120 56.7
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 4.3e-28 128.3 119 57.1
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.6e-28 127.9 113 58.4
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 6.2e-27 124.4 127 51.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.4e-26 122.5 116 56.0
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.1e-26 122.1 112 58.9
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.0e-26 121.7 119 55.5
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.2e-26 121.3 119 55.5
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 6.8e-26 120.9 141 48.2
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.5e-25 119.8 111 57.7
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.6e-25 119.0 125 55.2
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 3.4e-25 118.6 116 53.4
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 3.4e-25 118.6 119 53.8
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 5.8e-25 117.9 116 53.4
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 9.9e-25 117.1 118 49.2
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.3e-24 116.7 125 50.4
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 1.3e-24 116.7 119 52.9
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.7e-24 116.3 109 56.0
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 2.2e-24 115.9 125 50.4
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 3.8e-24 115.2 125 50.4
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 6.4e-24 114.4 120 53.3
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 8.4e-24 114.0 118 55.1
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.1e-23 113.6 127 50.4
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 1.4e-23 113.2 129 51.2
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.4e-23 113.2 125 51.2
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.9e-23 112.8 121 52.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.9e-23 112.8 125 52.0
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 2.4e-23 112.5 125 48.8
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.4e-23 112.5 106 58.5
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 3.2e-23 112.1 128 50.8
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 3.2e-23 112.1 110 54.5
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 7.1e-23 110.9 117 52.1
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 7.1e-23 110.9 126 47.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 7.1e-23 110.9 126 49.2
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 9.3e-23 110.5 114 51.8
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.2e-22 110.2 115 53.0
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.2e-22 110.2 120 50.0
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-22 109.8 115 50.4
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.6e-22 109.8 127 48.8
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.6e-22 109.8 126 50.0
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.6e-22 109.8 126 50.0
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 1.6e-22 109.8 114 53.5
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.1e-22 109.4 111 50.5
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.7e-22 109.0 125 45.6
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 2.7e-22 109.0 114 54.4
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.7e-22 109.0 125 49.6
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 3.5e-22 108.6 134 47.8
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 6.0e-22 107.8 127 47.2
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 7.8e-22 107.5 117 47.9
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 7.8e-22 107.5 114 52.6
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-21 107.1 124 50.8
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.0e-21 107.1 102 53.9
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.0e-21 107.1 125 52.0
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.0e-21 107.1 126 51.6
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.0e-21 107.1 136 47.8
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.3e-21 106.7 129 49.6
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.7e-21 106.3 123 46.3
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 1.7e-21 106.3 112 50.9
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 1.7e-21 106.3 119 50.4
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 2.3e-21 105.9 119 48.7
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.3e-21 105.9 119 53.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.3e-21 105.9 109 51.4
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.3e-21 105.9 113 54.0
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 3.0e-21 105.5 119 47.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 3.0e-21 105.5 117 47.0
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.0e-21 105.5 125 51.2
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.9e-21 105.1 129 48.1
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 5.1e-21 104.8 120 49.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 5.1e-21 104.8 114 49.1
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 5.1e-21 104.8 124 46.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 8.7e-21 104.0 124 48.4
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 8.7e-21 104.0 119 48.7
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 8.7e-21 104.0 116 53.4
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 1.1e-20 103.6 153 44.4
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.5e-20 103.2 115 50.4
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.5e-20 103.2 118 48.3
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-20 102.8 91 58.2
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.9e-20 102.8 91 58.2
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.9e-20 102.8 113 49.6
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.5e-20 102.4 123 48.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.3e-20 102.1 104 49.0
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 3.3e-20 102.1 123 47.2
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 4.3e-20 101.7 123 47.2
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 4.3e-20 101.7 125 47.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 4.3e-20 101.7 123 49.6
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 5.6e-20 101.3 102 54.9
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 7.3e-20 100.9 125 48.0
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 7.3e-20 100.9 125 48.0
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 7.3e-20 100.9 110 53.6
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.3e-19 100.1 123 47.2
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 1.3e-19 100.1 102 51.0
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.3e-19 100.1 125 49.6
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.6e-19 99.8 123 45.5
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 2.1e-19 99.4 123 45.5
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.8e-19 99.0 123 46.3
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 2.8e-19 99.0 123 45.5
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 2.8e-19 99.0 123 46.3
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 2.8e-19 99.0 126 46.0
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 3.6e-19 98.6 122 46.7
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.6e-19 98.6 97 51.5
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 4.8e-19 98.2 123 46.3
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 8.1e-19 97.4 125 44.0
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 8.1e-19 97.4 126 45.2
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.4e-18 96.7 125 46.4
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 1.4e-18 96.7 122 45.1
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 2.4e-18 95.9 108 50.0
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 2.4e-18 95.9 111 50.5
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 3.1e-18 95.5 125 46.4
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 3.1e-18 95.5 144 42.4
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 4.0e-18 95.1 123 46.3
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.2e-17 93.6 121 45.5
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.5e-17 93.2 116 47.4
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 3.4e-17 92.0 117 40.2
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 3.8e-16 88.6 132 43.9
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 6.4e-16 87.8 109 46.8
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.1e-15 87.0 93 47.3
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 9.3e-15 84.0 85 50.6
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 9.3e-15 84.0 73 57.5
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 3.5e-14 82.0 126 42.9
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 3.5e-14 82.0 101 47.5
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.0e-13 80.5 117 41.9
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 1.3e-13 80.1 126 42.1
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.3e-13 79.3 100 45.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.0e-13 79.0 100 45.0
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 3.9e-13 78.6 132 38.6
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 5.1e-13 78.2 96 45.8
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 5.1e-13 78.2 99 46.5
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 8.7e-13 77.4 114 40.4
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 8.7e-13 77.4 100 44.0
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.9e-12 76.3 115 41.7
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.3e-12 75.5 98 45.9
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 4.3e-12 75.1 115 40.9
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.3e-12 75.1 115 41.7
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.3e-12 75.1 115 41.7
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 9.6e-12 73.9 77 51.9
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 9.6e-12 73.9 68 51.5
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-11 73.6 93 43.0
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.1e-11 72.8 115 40.0
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.1e-11 72.8 67 50.7
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.8e-11 72.4 125 39.2
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 3.6e-11 72.0 96 41.7
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 3.6e-11 72.0 123 39.8
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 6.2e-11 71.2 68 48.5
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 3.1e-10 68.9 71 43.7
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 5.3e-10 68.2 90 48.9
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.2e-09 67.0 96 42.7
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.5e-09 66.6 133 35.3
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.0e-09 66.2 70 48.6
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.3e-08 63.5 125 35.2
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.3e-08 63.5 54 61.1
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.4e-07 60.1 63 49.2
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.9e-07 59.7 49 57.1
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.9e-07 59.7 49 57.1
Ciclev10023098m.g Citrus clementina HOM05D004226 ORTHO05D004842 2.4e-07 59.3 63 49.2
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 4.2e-07 58.5 67 50.7
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 1.2e-06 57.0 64 48.4
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 2.7e-06 55.8 61 52.5
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 6.0e-06 54.7 67 46.3


User provided reference genes

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