Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0606 Ceratophyllum demersum HOM05D062397 ORTHO05D043856 0.0e+00 1513.0 784 100.0
CDE05G2758 Ceratophyllum demersum HOM05D062397 ORTHO05D043856 3.8e-260 901.7 686 72.4
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 3.1e-15 88.2 204 34.8
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 1.2e-14 86.3 279 31.9
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.2e-14 86.3 279 31.9
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 3.4e-14 84.7 192 33.9
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 4.4e-14 84.3 193 33.7
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 5.8e-14 84.0 200 33.5
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 5.8e-14 84.0 196 34.7
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 1.3e-13 82.8 443 28.4
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 2.2e-13 82.0 383 25.3
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.2e-12 78.2 265 32.5
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.2e-12 78.2 278 30.2
ClCG05G007080 Citrullus lanatus HOM05D005839 ORTHO05D005686 1.6e-11 75.9 191 29.3
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 1.6e-11 75.9 465 26.2
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 1.6e-11 75.9 197 31.5
Cpa.g.sc157.17 Carica papaya HOM05D005839 ORTHO05D005686 2.1e-11 75.5 181 34.3
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.7e-11 75.1 265 30.6
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 2.7e-11 75.1 194 30.4
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 6.0e-11 73.9 273 28.9
Ciclev10004236m.g Citrus clementina HOM05D005839 ORTHO05D005686 1.0e-10 73.2 222 29.7
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 1.0e-10 73.2 197 30.5
Manes.05G199100 Manihot esculenta HOM05D005839 ORTHO05D005686 1.0e-10 73.2 177 32.8
Sed0018641 Sechium edule HOM05D005839 ORTHO05D005686 1.0e-10 73.2 181 33.1
Gohir.A10G130200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.3e-10 72.8 190 31.1
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 2.3e-10 72.0 178 31.5
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 5.1e-10 70.9 182 33.5
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 5.1e-10 70.9 174 34.5
Gohir.D10G136100 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.9e-09 68.9 190 30.5
Lj3A356G9 Lonicera japonica HOM05D005839 ORTHO05D005686 2.5e-09 68.6 186 31.7
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 3.3e-09 68.2 190 30.0
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 9.5e-09 66.6 186 30.6
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 1.2e-08 66.2 181 33.1
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 2.1e-08 65.5 132 36.4
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 2.1e-08 65.5 180 28.9
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 3.6e-08 64.7 140 36.4
Sc13g0000540 Simmondsia chinensis HOM05D005839 ORTHO05D005686 3.6e-08 64.7 139 36.7
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 4.7e-08 64.3 186 33.3
ATR1147G004 Amborella trichopoda HOM05D005839 ORTHO05D005686 8.1e-08 63.5 177 34.5
COL.COLO4_04260 Corchorus olitorius HOM05D005839 ORTHO05D005686 8.1e-08 63.5 197 29.9
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 8.1e-08 63.5 482 23.0
Potri.014G146200 Populus trichocarpa HOM05D005839 ORTHO05D005686 1.1e-07 63.2 196 32.1
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 1.8e-07 62.4 204 29.9
Actinidia35832 Actinidia chinensis HOM05D005839 ORTHO05D005686 3.1e-07 61.6 181 33.7
PGR083G0592 Punica granatum HOM05D005839 ORTHO05D005686 3.1e-07 61.6 644 23.6
Glyma.05G150200 Glycine max HOM05D005839 ORTHO05D005686 4.0e-07 61.2 184 29.9
Gorai.005G128100 Gossypium raimondii HOM05D005839 ORTHO05D005686 4.0e-07 61.2 186 29.6
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 4.0e-07 61.2 174 30.5
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 5.2e-07 60.8 172 30.8
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 8.9e-07 60.1 173 32.4
Gohir.D02G113200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 8.9e-07 60.1 186 29.0
Atru.chr3.1775 Acer truncatum HOM05D005839 ORTHO05D005686 1.2e-06 59.7 132 31.1
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.2e-06 59.7 196 29.6
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 1.5e-06 59.3 203 28.1
Hund24442 Selenicereus undatus HOM05D005839 ORTHO05D005686 1.5e-06 59.3 172 32.6
MSTRG.4261 Avicennia marina HOM05D005839 ORTHO05D005686 2.0e-06 58.9 279 29.4
VMungo0251G1575 Vigna mungo HOM05D005839 ORTHO05D005686 2.0e-06 58.9 201 29.9
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 3.4e-06 58.2 196 27.6
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 4.4e-06 57.8 181 30.4
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 4.4e-06 57.8 180 29.4
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 7.6e-06 57.0 180 29.4
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 7.6e-06 57.0 177 32.2


User provided reference genes

Program Settings