Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0558 Ceratophyllum demersum HOM05D000133 ORTHO05D130053 1.4e-84 316.2 160 100.0
CDE05G0052 Ceratophyllum demersum HOM05D000133 ORTHO05D008574 2.7e-19 99.4 88 61.4
Zm00001eb309200 Zea mays HOM05D000133 ORTHO05D008574 1.1e-15 87.4 88 55.7
Os09g0296800 Oryza sativa ssp. japonica HOM05D000133 ORTHO05D008574 1.8e-15 86.7 88 54.5
HPP92_021696 Vanilla planifolia HOM05D000133 ORTHO05D008574 6.9e-15 84.7 88 53.4
HPP92_021707 Vanilla planifolia HOM05D000133 ORTHO05D008574 6.9e-15 84.7 88 53.4
ATR0605G395 Amborella trichopoda HOM05D000133 ORTHO05D008574 1.2e-14 84.0 88 52.3
FAN13G3062 Fragaria x ananassa HOM05D000133 ORTHO05D008574 3.4e-14 82.4 100 47.0
QL02p016048 Quercus lobata HOM05D000133 ORTHO05D008574 7.6e-14 81.3 88 52.3
SGA_v2.0_scaffold220G42607 Striga asiatica HOM05D000133 ORTHO05D008574 7.6e-14 81.3 88 48.9
Medtr1g026550 Medicago truncatula HOM05D000133 ORTHO05D008574 1.0e-13 80.9 88 50.0
Ca_13498_v3 Cicer arietinum L. HOM05D000133 ORTHO05D008574 1.7e-13 80.1 88 50.0
TPR.G26411 Trifolium pratense HOM05D000133 ORTHO05D008574 1.7e-13 80.1 88 50.0
TWI36G0469 Tripterygium wilfordii HOM05D000133 ORTHO05D008574 1.7e-13 80.1 88 51.1
Cfa014158 Carpinus fangiana HOM05D000133 ORTHO05D008574 2.2e-13 79.7 88 51.1
MD06G1001700 Malus domestica HOM05D000133 ORTHO05D008574 2.2e-13 79.7 88 50.0
Sed0015290 Sechium edule HOM05D000133 ORTHO05D008574 2.2e-13 79.7 88 47.7
Atru.chr13.28 Acer truncatum HOM05D000133 ORTHO05D008574 2.9e-13 79.3 88 50.0
Lj4A813T62 Lonicera japonica HOM05D000133 ORTHO05D008574 2.9e-13 79.3 88 48.9
Actinidia15547 Actinidia chinensis HOM05D000133 ORTHO05D008574 3.8e-13 79.0 88 50.0
ClCG11G019140 Citrullus lanatus HOM05D000133 ORTHO05D008574 3.8e-13 79.0 88 48.9
CsaV3_4G037740 Cucumis sativus L. HOM05D000133 ORTHO05D008574 3.8e-13 79.0 88 48.9
Lj5g0024964 Lotus japonicus HOM05D000133 ORTHO05D008574 3.8e-13 79.0 88 50.0
GSVIVG01013450001 Vitis vinifera HOM05D000133 ORTHO05D008574 3.8e-13 79.0 88 50.0
CiPaw.07G131000 Carya illinoinensis HOM05D000133 ORTHO05D008574 4.9e-13 78.6 88 50.0
MSTRG.24529 Avicennia marina HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 46.6
COL.COLO4_28212 Corchorus olitorius HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 50.0
Dinv23348 Davidia involucrata HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 48.9
FvH4_5g26480 Fragaria vesca HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 48.9
FAN08G0937 Fragaria x ananassa HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 48.9
FAN18G1274 Fragaria x ananassa HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 48.9
MBI04_g11529_MAGBIO Magnolia biondii HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 51.1
Psat6g000800 Pisum sativum HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 50.0
RcHm_v2.0_Chr7g0217391 Rosa chinensis HOM05D000133 ORTHO05D008574 6.5e-13 78.2 88 48.9
Thecc.05G158800 Theobroma cacao HOM05D000133 ORTHO05D008574 8.4e-13 77.8 88 50.0
Gohir.A02G108200 Gossypium hirsutum HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 47.7
Gohir.D03G068000 Gossypium hirsutum HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 47.7
Gorai.003G092700 Gossypium raimondii HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 47.7
Lalb_Chr03g0033711 Lupinus albus HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 47.7
Manes.15G159000 Manihot esculenta HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 48.9
Oeu030368.1 Olea europaea HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 46.6
PGR083G0731 Punica granatum HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 48.9
vmacro21742 Vaccinium macrocarpon HOM05D000133 ORTHO05D008574 1.1e-12 77.4 88 47.7
Eucgr.F01826 Eucalyptus grandis HOM05D000133 ORTHO05D008574 1.4e-12 77.0 88 48.9
AL2G36710 Arabidopsis lyrata HOM05D000133 ORTHO05D008574 1.9e-12 76.6 88 47.7
HanXRQChr14g0427961 Helianthus annuus HOM05D000133 ORTHO05D008574 1.9e-12 76.6 88 48.9
Aqoxy6G03043 Aquilegia oxysepala HOM05D000133 ORTHO05D008574 2.5e-12 76.3 88 48.9
Migut.N02998 Erythranthe guttata HOM05D000133 ORTHO05D008574 2.5e-12 76.3 88 46.6
DCAR_000466 Daucus carota HOM05D000133 ORTHO05D008574 3.2e-12 75.9 88 46.6
DCAR_003080 Daucus carota HOM05D000133 ORTHO05D008574 3.2e-12 75.9 88 46.6
ECA238G4093 Erigeron canadensis HOM05D000133 ORTHO05D008574 3.2e-12 75.9 88 48.9
QL03p047096 Quercus lobata HOM05D000133 ORTHO05D008574 3.2e-12 75.9 116 44.0
PGSC0003DMG401009929 Solanum tuberosum HOM05D000133 ORTHO05D008574 3.2e-12 75.9 88 48.9
unitig_8.g3346 Utricularia gibba HOM05D000133 ORTHO05D008574 3.2e-12 75.9 88 46.6
CAN.G1330.27 Capsicum annuum HOM05D000133 ORTHO05D008574 4.2e-12 75.5 88 48.9
Ciclev10006886m.g Citrus clementina HOM05D000133 ORTHO05D008574 4.2e-12 75.5 88 47.7
Lsat_1_v5_gn_2_3220 Lactuca sativa HOM05D000133 ORTHO05D008574 4.2e-12 75.5 88 47.7
TAR628G0159 Trochodendron aralioides HOM05D000133 ORTHO05D008574 4.2e-12 75.5 88 47.7
arahy.Tifrunner.gnm1.ann1.5CP0AS Arachis hypogaea HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
arahy.Tifrunner.gnm1.ann1.FPQS3Q Arachis hypogaea HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
BcaC03g15687 Brassica carinata HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
A02p20770 Brassica napus HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
C02p32890 Brassica napus HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
BolC2t09410H Brassica oleracea HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
BraA02t07110Z Brassica rapa HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 46.6
Haze_22880 Corylus avellana HOM05D000133 ORTHO05D008574 5.5e-12 75.1 79 54.4
Pp3c25_1690 Physcomitrium patens HOM05D000133 ORTHO05D008574 5.5e-12 75.1 88 47.7
Carub.0002s0674 Capsella rubella HOM05D000133 ORTHO05D008574 9.3e-12 74.3 88 46.6
Nitab4.5_0009514g0080 Nicotiana tabacum HOM05D000133 ORTHO05D008574 9.3e-12 74.3 88 47.7
Sopen04g036560 Solanum pennellii HOM05D000133 ORTHO05D008574 9.3e-12 74.3 88 47.7
VMungo0647G0158 Vigna mungo HOM05D000133 ORTHO05D008574 9.3e-12 74.3 88 46.6
Cpa.g.sc50.106 Carica papaya HOM05D000133 ORTHO05D008574 1.2e-11 73.9 80 51.2
MELO3C017067.2 Cucumis melo HOM05D000133 ORTHO05D008574 1.2e-11 73.9 79 51.9
Thhalv10018862m.g Eutrema salsugineum HOM05D000133 ORTHO05D008574 1.2e-11 73.9 88 46.6
Glyma.17G262400 Glycine max HOM05D000133 ORTHO05D008574 1.2e-11 73.9 88 46.6
Hma1.2p1_0914F.1_g236130 Hydrangea macrophylla HOM05D000133 ORTHO05D008574 1.2e-11 73.9 88 46.6
Sp5g31730 Schrenkiella parvula HOM05D000133 ORTHO05D008574 1.2e-11 73.9 88 45.5
AT1G76570 Arabidopsis thaliana HOM05D000133 ORTHO05D008574 1.6e-11 73.6 88 45.5
BcaB05g24997 Brassica carinata HOM05D000133 ORTHO05D008574 1.6e-11 73.6 88 45.5
PSO675G8603 Papaver somniferum HOM05D000133 ORTHO05D008574 1.6e-11 73.6 79 51.9
CSS0023573 Camellia sinensis var. sinensis HOM05D000133 ORTHO05D008574 2.1e-11 73.2 79 51.9
THA.LOC104812020 Tarenaya hassleriana HOM05D000133 ORTHO05D008574 2.1e-11 73.2 88 45.5
CSS0033337 Camellia sinensis var. sinensis HOM05D000133 ORTHO05D008574 2.7e-11 72.8 79 51.9
Prupe.5G002700 Prunus persica HOM05D000133 ORTHO05D008574 2.7e-11 72.8 79 50.6
EL10Ac1g01847 Beta vulgaris HOM05D000133 ORTHO05D008574 3.5e-11 72.4 105 41.0
CANSAT25G0908 Cannabis sativa HOM05D000133 ORTHO05D008574 3.5e-11 72.4 88 44.3
Nn7g36295 Nelumbo nucifera HOM05D000133 ORTHO05D008574 3.5e-11 72.4 79 51.9
Cc10_g00140 Coffea canephora HOM05D000133 ORTHO05D008574 4.6e-11 72.0 88 46.6
Peaxi162Scf00385g00095 Petunia axillaris HOM05D000133 ORTHO05D008574 4.6e-11 72.0 88 46.6
Potri.005G258600 Populus trichocarpa HOM05D000133 ORTHO05D008574 7.9e-11 71.2 88 43.2
Sabra05G0200200 Salix brachista HOM05D000133 ORTHO05D008574 7.9e-11 71.2 88 45.5
PSO541G6038 Papaver somniferum HOM05D000133 ORTHO05D008574 1.0e-10 70.9 79 50.6
SMO174G0043 Selaginella moellendorffii HOM05D000133 ORTHO05D008574 8.7e-10 67.8 88 43.2
AUR62035189 Chenopodium quinoa HOM05D000133 ORTHO05D008574 2.5e-09 66.2 88 43.2
Mapoly0008s0015 Marchantia polymorpha HOM05D000133 ORTHO05D008574 4.3e-09 65.5 88 42.0
Rhsim06G0001500 Rhododendron simsii HOM05D000133 ORTHO05D008574 4.3e-09 65.5 79 46.8
Aa31LG4G6670 Aethionema arabicum HOM05D000133 ORTHO05D008574 7.4e-09 64.7 76 46.1
Hund05066 Selenicereus undatus HOM05D000133 ORTHO05D008574 1.3e-08 63.9 107 38.3
AUR62042535 Chenopodium quinoa HOM05D000133 ORTHO05D008574 4.1e-07 58.9 41 65.9


User provided reference genes

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