Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 4.4e-71 271.2 136 100.0
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 8.4e-46 187.2 119 83.2
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 8.7e-35 150.6 119 63.0
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 1.1e-32 143.7 118 61.9
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 5.3e-32 141.4 116 62.9
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 6.9e-32 141.0 119 60.5
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 1.5e-31 139.8 118 62.7
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 1.5e-31 139.8 119 59.7
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 2.0e-31 139.4 119 58.0
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 3.4e-31 138.7 115 59.1
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 4.5e-31 138.3 119 58.0
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 5.8e-31 137.9 118 59.3
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 7.6e-31 137.5 119 58.8
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.0e-30 137.1 113 63.7
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.3e-30 136.7 115 60.0
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 1.3e-30 136.7 116 61.2
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 1.3e-30 136.7 118 57.6
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 2.2e-30 136.0 109 63.3
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 2.2e-30 136.0 115 57.4
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.2e-30 136.0 119 59.7
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 2.9e-30 135.6 118 60.2
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 2.9e-30 135.6 117 60.7
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 3.8e-30 135.2 120 57.5
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 4.9e-30 134.8 115 61.7
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 6.5e-30 134.4 116 58.6
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 6.5e-30 134.4 118 59.3
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 8.4e-30 134.0 116 58.6
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 8.4e-30 134.0 119 58.0
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 8.4e-30 134.0 119 55.5
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 8.4e-30 134.0 117 56.4
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 8.4e-30 134.0 110 60.0
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 8.4e-30 134.0 118 59.3
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 1.1e-29 133.7 119 56.3
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.1e-29 133.7 112 58.0
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 1.1e-29 133.7 118 54.2
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.4e-29 133.3 116 58.6
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.4e-29 133.3 118 58.5
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.4e-29 133.3 116 61.2
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 1.9e-29 132.9 115 56.5
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 1.9e-29 132.9 118 55.9
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 1.9e-29 132.9 117 58.1
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.9e-29 132.9 120 58.3
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 3.2e-29 132.1 120 60.8
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 3.2e-29 132.1 113 59.3
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 4.2e-29 131.7 112 58.9
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 4.2e-29 131.7 118 56.8
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 4.2e-29 131.7 111 60.4
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 5.5e-29 131.3 112 58.9
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 5.5e-29 131.3 112 57.1
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 5.5e-29 131.3 112 57.1
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 7.1e-29 131.0 118 56.8
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 7.1e-29 131.0 117 55.6
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 9.3e-29 130.6 119 55.5
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.6e-28 129.8 110 60.0
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.1e-28 129.4 116 54.3
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 2.7e-28 129.0 117 55.6
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.7e-28 129.0 112 57.1
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.6e-28 128.3 116 56.9
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 6.0e-28 127.9 111 58.6
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 6.0e-28 127.9 115 54.8
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 6.0e-28 127.9 123 55.3
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 7.9e-28 127.5 112 57.1
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 7.9e-28 127.5 115 57.4
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.0e-27 127.1 118 55.1
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 1.3e-27 126.7 117 54.7
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 1.8e-27 126.3 117 54.7
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 2.3e-27 125.9 115 55.7
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 3.0e-27 125.6 116 54.3
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 3.9e-27 125.2 125 55.2
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 3.9e-27 125.2 116 52.6
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 1.1e-26 123.6 113 59.3
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 2.5e-26 122.5 118 54.2
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 2.5e-26 122.5 118 54.2
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 2.5e-26 122.5 118 51.7
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 4.3e-26 121.7 118 54.2
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 4.3e-26 121.7 118 54.2
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 5.7e-26 121.3 122 51.6
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 5.7e-26 121.3 118 50.8
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 7.4e-26 120.9 114 52.6
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 1.3e-25 120.2 130 50.8
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 1.3e-25 120.2 109 52.3
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.2e-25 119.4 117 52.1
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 2.2e-25 119.4 119 54.6
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 3.7e-25 118.6 112 53.6
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 4.8e-25 118.2 109 53.2
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 8.2e-25 117.5 114 54.4
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 1.1e-24 117.1 111 57.7
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 3.1e-24 115.5 106 54.7
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 4.1e-24 115.2 116 50.9
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 2.0e-23 112.8 86 58.1
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 4.5e-23 111.7 109 50.5
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 5.9e-23 111.3 146 45.2
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 7.6e-23 110.9 140 43.6
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 1.7e-22 109.8 130 46.2
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 1.7e-22 109.8 111 51.4
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 2.2e-22 109.4 125 50.4
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 7.2e-21 104.4 90 56.7
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 1.8e-19 99.8 90 53.3
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 1.8e-19 99.8 76 57.9
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 5.7e-18 94.7 193 36.3
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 4.8e-17 91.7 75 54.7
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 8.2e-17 90.9 114 42.1
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 2.7e-12 75.9 59 59.3
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 1.5e-10 70.1 71 49.3
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 9.7e-10 67.4 56 55.4
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 7.7e-07 57.8 42 59.5


User provided reference genes

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