Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 2.2e-54 215.3 105 100.0
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 3.8e-38 161.4 105 75.2
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 1.0e-35 153.3 105 69.5
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 1.8e-35 152.5 103 69.9
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.8e-35 152.5 101 73.3
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 5.1e-35 151.0 105 71.4
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 5.1e-35 151.0 105 71.4
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 8.8e-35 150.2 105 71.4
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.8e-35 150.2 104 69.2
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 8.8e-35 150.2 101 72.3
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.1e-34 149.8 105 69.5
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 3.3e-34 148.3 105 68.6
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 3.3e-34 148.3 105 69.5
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.4e-34 147.9 104 68.3
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 9.7e-34 146.7 105 71.4
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 9.7e-34 146.7 105 69.5
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 9.7e-34 146.7 105 70.5
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.3e-33 146.4 105 68.6
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.7e-33 146.0 104 69.2
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 1.7e-33 146.0 105 70.5
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.7e-33 146.0 105 68.6
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.7e-33 146.0 105 68.6
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.7e-33 146.0 106 71.7
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 2.2e-33 145.6 105 69.5
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 2.8e-33 145.2 99 70.7
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.8e-33 145.2 103 69.9
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.8e-33 145.2 105 67.6
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 4.8e-33 144.4 105 65.7
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 6.3e-33 144.1 103 68.9
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.1e-32 143.3 103 68.9
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-32 143.3 104 65.4
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.1e-32 143.3 105 66.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.4e-32 142.9 105 67.6
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.8e-32 142.5 105 64.8
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.8e-32 142.5 105 69.5
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.8e-32 142.5 103 66.0
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 3.1e-32 141.7 105 66.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 9.1e-32 140.2 105 65.7
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 1.2e-31 139.8 104 62.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 2.6e-31 138.7 105 65.7
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 3.5e-31 138.3 103 66.0
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 3.5e-31 138.3 105 66.7
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 3.5e-31 138.3 105 65.7
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 3.5e-31 138.3 100 67.0
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 4.5e-31 137.9 100 68.0
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.5e-31 137.9 102 65.7
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 5.9e-31 137.5 99 64.6
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 7.7e-31 137.1 103 66.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 1.7e-30 136.0 105 63.8
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.8e-30 134.8 91 72.5
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 6.5e-30 134.0 95 68.4
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 8.5e-30 133.7 105 62.9
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.1e-29 133.3 99 65.7
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.5e-29 132.9 89 73.0
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.9e-29 132.5 105 62.9
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 2.5e-29 132.1 104 60.6
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 4.2e-29 131.3 97 64.9
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 5.5e-29 131.0 105 61.9
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 7.2e-29 130.6 97 63.9
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 7.2e-29 130.6 103 64.1
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 9.4e-29 130.2 105 62.9
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 1.2e-28 129.8 103 64.1
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.6e-28 129.4 103 63.1
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 2.1e-28 129.0 105 62.9
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 3.6e-28 128.3 105 61.9
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 6.1e-28 127.5 100 61.0
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 3.0e-27 125.2 103 64.1
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 3.0e-27 125.2 104 63.5
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 4.0e-27 124.8 99 62.6
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 5.2e-27 124.4 91 65.9
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 8.8e-27 123.6 77 77.9
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 1.1e-26 123.2 95 63.2
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.5e-26 122.9 91 63.7
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 2.0e-26 122.5 89 66.3
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 2.0e-26 122.5 91 63.7
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.6e-26 122.1 91 63.7
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.3e-26 121.7 77 75.3
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 5.7e-26 120.9 94 66.0
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 5.7e-26 120.9 78 75.6
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 5.7e-26 120.9 92 64.1
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 7.5e-26 120.6 91 62.6
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 9.7e-26 120.2 91 63.7
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 3.7e-25 118.2 87 64.4
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 3.7e-25 118.2 87 64.4
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 4.8e-25 117.9 89 62.9
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 6.3e-25 117.5 74 75.7
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 2.4e-24 115.5 90 62.2
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 5.3e-24 114.4 91 59.3
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 5.3e-24 114.4 89 61.8
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 5.3e-24 114.4 99 54.5
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 9.1e-24 113.6 89 59.6
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 9.1e-24 113.6 93 58.1
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.2e-23 113.2 91 59.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.0e-23 112.5 77 71.4
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 2.7e-23 112.1 89 59.6
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 4.5e-23 111.3 78 67.9
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.2e-22 109.0 76 68.4
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 2.2e-22 109.0 79 65.8
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.9e-22 108.6 80 66.2
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 3.8e-22 108.2 90 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.2e-21 105.1 94 57.4
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 4.2e-21 104.8 79 62.0
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 2.1e-20 102.4 76 69.7
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 6.1e-20 100.9 78 60.3
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.8e-19 99.4 73 64.4
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.5e-18 96.3 64 70.3
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 4.4e-18 94.7 87 56.3
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 5.7e-18 94.4 91 51.6
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.8e-16 89.4 64 67.2
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 9.1e-16 87.0 100 51.0
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.7e-15 85.5 87 50.6
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 5.9e-15 84.3 86 50.0
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 2.9e-14 82.0 62 67.7
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.3e-11 72.4 76 47.4
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 2.3e-11 72.4 101 42.6
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 7.5e-10 67.4 87 41.4
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 4.1e-08 61.6 114 34.2
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 1.6e-07 59.7 51 56.9


User provided reference genes

Program Settings