Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 1.8e-96 355.9 184 100.0
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 5.6e-61 238.0 180 68.3
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 1.6e-60 236.5 180 67.8
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.5e-58 229.9 180 65.6
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.5e-58 229.9 180 65.6
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 3.4e-58 228.8 181 66.9
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 3.4e-58 228.8 181 66.9
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 1.7e-57 226.5 180 63.3
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.1e-56 223.8 180 62.8
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.9e-56 223.0 182 63.2
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 3.2e-56 222.2 180 63.3
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 4.2e-56 221.9 181 66.9
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 5.4e-56 221.5 182 64.8
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 5.4e-56 221.5 181 64.6
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 1.2e-55 220.3 180 62.8
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 1.2e-55 220.3 180 62.2
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 2.1e-55 219.5 180 63.3
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 2.7e-55 219.2 181 64.6
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 2.7e-55 219.2 181 64.6
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 2.7e-55 219.2 181 63.5
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 3.5e-55 218.8 181 61.9
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 6.0e-55 218.0 180 61.7
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 7.9e-55 217.6 181 64.1
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.0e-54 217.2 180 61.7
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.0e-54 217.2 180 61.7
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 1.3e-54 216.9 182 62.1
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 3.0e-54 215.7 181 61.3
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 3.0e-54 215.7 183 61.2
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 5.1e-54 214.9 185 63.2
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 6.6e-54 214.5 180 62.8
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.1e-53 213.8 184 60.9
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.1e-53 213.8 181 61.9
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 1.5e-53 213.4 115 93.0
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 1.5e-53 213.4 180 61.7
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 1.5e-53 213.4 181 61.3
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 1.9e-53 213.0 180 61.7
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 1.9e-53 213.0 180 65.0
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 2.5e-53 212.6 182 61.0
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.3e-52 210.3 187 59.4
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 1.6e-52 209.9 180 62.8
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 1.6e-52 209.9 180 60.0
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 2.1e-52 209.5 180 60.0
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 4.8e-52 208.4 180 59.4
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 8.1e-52 207.6 180 60.0
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 1.1e-51 207.2 181 60.2
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 1.4e-51 206.8 180 60.6
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 1.8e-51 206.5 181 61.3
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 2.4e-51 206.1 180 59.4
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 2.4e-51 206.1 181 60.2
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 3.1e-51 205.7 182 61.0
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.1e-51 205.7 182 61.0
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.0e-51 205.3 179 59.8
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 4.0e-51 205.3 181 60.8
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 4.0e-51 205.3 181 61.3
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 6.9e-51 204.5 181 61.9
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 9.0e-51 204.1 179 59.2
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 9.0e-51 204.1 180 57.8
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 9.0e-51 204.1 180 59.4
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 1.2e-50 203.8 164 61.6
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 1.2e-50 203.8 181 61.3
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.2e-50 203.8 180 58.3
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 1.2e-50 203.8 181 59.1
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 1.2e-50 203.8 181 60.8
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 1.5e-50 203.4 179 62.0
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 2.0e-50 203.0 184 59.2
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 2.0e-50 203.0 180 58.3
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 2.6e-50 202.6 185 61.1
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 2.6e-50 202.6 181 59.1
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 2.6e-50 202.6 181 58.0
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 2.6e-50 202.6 181 58.6
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 3.4e-50 202.2 181 58.6
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 4.5e-50 201.8 217 53.5
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 5.8e-50 201.4 179 62.6
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 5.8e-50 201.4 180 61.1
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 5.8e-50 201.4 180 61.1
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 5.8e-50 201.4 180 57.8
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 7.6e-50 201.1 176 59.1
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 7.6e-50 201.1 180 59.4
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 7.6e-50 201.1 183 60.7
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 9.9e-50 200.7 186 59.7
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 1.3e-49 200.3 181 63.0
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 1.3e-49 200.3 184 58.2
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 1.7e-49 199.9 181 58.0
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 2.2e-49 199.5 180 61.1
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 2.2e-49 199.5 180 61.1
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.2e-49 199.5 181 58.0
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 2.9e-49 199.1 189 59.3
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 2.9e-49 199.1 180 58.9
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 2.9e-49 199.1 183 59.0
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.8e-49 198.7 182 58.2
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 4.9e-49 198.4 183 59.0
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 4.9e-49 198.4 181 57.5
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 6.4e-49 198.0 166 61.4
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.4e-49 198.0 181 57.5
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 6.4e-49 198.0 182 57.7
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 8.4e-49 197.6 180 53.9
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 8.4e-49 197.6 181 58.0
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 8.4e-49 197.6 181 58.0
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 1.1e-48 197.2 180 60.0
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 1.4e-48 196.8 182 58.8
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 1.9e-48 196.4 183 57.9
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 1.9e-48 196.4 177 60.5
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 1.9e-48 196.4 182 58.2
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 2.4e-48 196.1 161 63.4
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 2.4e-48 196.1 164 61.6
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 2.4e-48 196.1 180 56.1
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 3.2e-48 195.7 182 57.1
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 4.2e-48 195.3 186 60.8
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 5.4e-48 194.9 167 63.5
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 9.3e-48 194.1 190 54.7
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.2e-47 193.7 180 57.2
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 2.1e-47 193.0 188 56.9
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 2.7e-47 192.6 183 58.5
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 4.6e-47 191.8 124 72.6
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 6.0e-47 191.4 184 55.4
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 6.0e-47 191.4 177 58.8
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 1.3e-46 190.3 204 52.0
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 1.3e-46 190.3 177 57.6
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 2.3e-46 189.5 182 56.6
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 5.1e-46 188.3 181 56.9
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 5.1e-46 188.3 127 74.0
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 6.7e-46 188.0 119 73.9
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 2.5e-45 186.0 160 60.0
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 1.3e-44 183.7 127 72.4
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 6.2e-44 181.4 193 54.9
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 8.1e-44 181.0 199 52.3
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 1.8e-43 179.9 181 54.7
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 5.3e-43 178.3 182 56.0
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 4.9e-41 171.8 187 50.3
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 4.9e-41 171.8 113 73.5
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 8.4e-41 171.0 120 67.5
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.2e-39 167.2 117 63.2
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 3.5e-39 165.6 184 49.5
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 1.8e-38 163.3 123 64.2
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 6.7e-38 161.4 109 72.5
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 1.9e-37 159.8 183 51.9
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 4.3e-37 158.7 197 48.2
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 7.4e-37 157.9 156 54.5
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 1.4e-35 153.7 180 48.3
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 1.2e-34 150.6 180 49.4
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 2.5e-32 142.9 111 58.6
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 5.5e-32 141.7 165 48.5
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 9.3e-32 141.0 85 80.0
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 9.3e-32 141.0 115 62.6
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 2.2e-28 129.8 104 63.5
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 3.1e-27 125.9 124 50.8
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 9.0e-27 124.4 109 50.5
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 1.7e-25 120.2 77 76.6
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 4.5e-18 95.5 148 33.8
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 1.9e-16 90.1 156 37.8
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 1.0e-09 67.8 75 48.0


User provided reference genes

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