Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0404 Ceratophyllum demersum HOM05D002319 ORTHO05D002374 1.9e-145 519.2 280 100.0
CDE05G0017 Ceratophyllum demersum HOM05D002319 ORTHO05D002374 2.8e-112 409.1 279 82.1
TAR623G0514 Trochodendron aralioides HOM05D002319 ORTHO05D002374 8.1e-19 98.6 303 35.0
Thecc.09G277700 Theobroma cacao HOM05D002319 ORTHO05D002374 2.6e-17 93.6 295 31.5
Nn6g34794 Nelumbo nucifera HOM05D002319 ORTHO05D002374 3.4e-17 93.2 304 32.9
MBI11_g23194_MAGBIO Magnolia biondii HOM05D002319 ORTHO05D002374 1.3e-16 91.3 297 31.6
VMungo1383G1918 Vigna mungo HOM05D002319 ORTHO05D002374 1.3e-16 91.3 290 30.3
Manes.11G164600 Manihot esculenta HOM05D002319 ORTHO05D002374 3.8e-16 89.7 284 31.0
Duzib150G0510 Durio zibethinus HOM05D002319 ORTHO05D002374 6.4e-16 89.0 292 30.1
Glyma.19G196800 Glycine max HOM05D002319 ORTHO05D002374 6.4e-16 89.0 289 30.4
MBI07_g42012_MAGBIO Magnolia biondii HOM05D002319 ORTHO05D002374 8.4e-16 88.6 302 32.8
TAR633G1586 Trochodendron aralioides HOM05D002319 ORTHO05D002374 1.1e-15 88.2 306 31.4
Phvul.001G193300 Phaseolus vulgaris HOM05D002319 ORTHO05D002374 2.4e-15 87.0 290 29.3
Sabra16G0076900 Salix brachista HOM05D002319 ORTHO05D002374 5.4e-15 85.9 296 31.1
Sabra16G0080000 Salix brachista HOM05D002319 ORTHO05D002374 5.4e-15 85.9 296 31.1
Potri.016G074300 Populus trichocarpa HOM05D002319 ORTHO05D002374 7.1e-15 85.5 298 30.9
TWI53G1033 Tripterygium wilfordii HOM05D002319 ORTHO05D002374 2.7e-14 83.6 304 32.2
TWI77G0898 Tripterygium wilfordii HOM05D002319 ORTHO05D002374 3.5e-14 83.2 297 31.0
Duzib170G0266 Durio zibethinus HOM05D002319 ORTHO05D002374 4.6e-14 82.8 290 32.1
Thecc.05G097100 Theobroma cacao HOM05D002319 ORTHO05D002374 6.0e-14 82.4 306 30.4
GSVIVG01033905001 Vitis vinifera HOM05D002319 ORTHO05D002374 6.0e-14 82.4 299 30.4
QL01p011779 Quercus lobata HOM05D002319 ORTHO05D002374 1.0e-13 81.6 292 30.8
Dinv31730 Davidia involucrata HOM05D002319 ORTHO05D002374 1.7e-13 80.9 309 29.8
Gohir.D05G082000 Gossypium hirsutum HOM05D002319 ORTHO05D002374 2.3e-13 80.5 294 29.6
Lj1g0025805 Lotus japonicus HOM05D002319 ORTHO05D002374 3.0e-13 80.1 306 28.8
Gohir.A04G060700 Gossypium hirsutum HOM05D002319 ORTHO05D002374 3.9e-13 79.7 314 29.9
Potri.004G199500 Populus trichocarpa HOM05D002319 ORTHO05D002374 3.9e-13 79.7 288 30.9
Actinidia07912 Actinidia chinensis HOM05D002319 ORTHO05D002374 5.1e-13 79.3 305 29.2
Gorai.009G083600 Gossypium raimondii HOM05D002319 ORTHO05D002374 6.6e-13 79.0 294 29.6
Lalb_Chr20g0111531 Lupinus albus HOM05D002319 ORTHO05D002374 1.1e-12 78.2 321 28.0
HanXRQChr04g0119651 Helianthus annuus HOM05D002319 ORTHO05D002374 1.5e-12 77.8 291 29.9
Dinv08919 Davidia involucrata HOM05D002319 ORTHO05D002374 2.5e-12 77.0 283 31.4
Gorai.001G123300 Gossypium raimondii HOM05D002319 ORTHO05D002374 2.5e-12 77.0 294 28.9
Manes.08G029400 Manihot esculenta HOM05D002319 ORTHO05D002374 2.5e-12 77.0 308 28.9
Gorai.009G398800 Gossypium raimondii HOM05D002319 ORTHO05D002374 3.3e-12 76.6 306 29.4
BcaC05g29351 Brassica carinata HOM05D002319 ORTHO05D002374 7.3e-12 75.5 305 28.5
C05p56340 Brassica napus HOM05D002319 ORTHO05D002374 7.3e-12 75.5 305 28.5
BolC5t34298H Brassica oleracea HOM05D002319 ORTHO05D002374 7.3e-12 75.5 305 28.5
Ciclev10011212m.g Citrus clementina HOM05D002319 ORTHO05D002374 7.3e-12 75.5 323 28.5
Manes.09G051100 Manihot esculenta HOM05D002319 ORTHO05D002374 7.3e-12 75.5 310 28.7
CANSAT64G1671 Cannabis sativa HOM05D002319 ORTHO05D002374 9.6e-12 75.1 302 29.5
PGR119G1567 Punica granatum HOM05D002319 ORTHO05D002374 9.6e-12 75.1 294 28.9
TAR636G1826 Trochodendron aralioides HOM05D002319 ORTHO05D002374 9.6e-12 75.1 344 29.7
Gohir.D04G095900 Gossypium hirsutum HOM05D002319 ORTHO05D002374 1.3e-11 74.7 306 29.4
Duzib093G1299 Durio zibethinus HOM05D002319 ORTHO05D002374 1.6e-11 74.3 313 29.4
Duzib128G1692 Durio zibethinus HOM05D002319 ORTHO05D002374 1.6e-11 74.3 315 29.5
arahy.Tifrunner.gnm1.ann1.5JT16E Arachis hypogaea HOM05D002319 ORTHO05D002374 2.1e-11 73.9 309 29.4
Cfa009982 Carpinus fangiana HOM05D002319 ORTHO05D002374 2.1e-11 73.9 292 29.1
DCAR_020731 Daucus carota HOM05D002319 ORTHO05D002374 2.1e-11 73.9 291 28.5
Duzib168G0663 Durio zibethinus HOM05D002319 ORTHO05D002374 2.1e-11 73.9 295 29.2
CARHR086140 Cardamine hirsuta HOM05D002319 ORTHO05D002374 2.8e-11 73.6 312 28.5
DCAR_010324 Daucus carota HOM05D002319 ORTHO05D002374 2.8e-11 73.6 277 28.9
Eucgr.A02622 Eucalyptus grandis HOM05D002319 ORTHO05D002374 2.8e-11 73.6 299 29.1
MSTRG.19285 Avicennia marina HOM05D002319 ORTHO05D002374 3.6e-11 73.2 321 28.3
THA.LOC104816606 Tarenaya hassleriana HOM05D002319 ORTHO05D002374 3.6e-11 73.2 325 29.2
Psat3g030800 Pisum sativum HOM05D002319 ORTHO05D002374 4.8e-11 72.8 301 27.6
Prupe.7G100300 Prunus persica HOM05D002319 ORTHO05D002374 4.8e-11 72.8 310 29.0
Atru.chr3.3160 Acer truncatum HOM05D002319 ORTHO05D002374 6.2e-11 72.4 297 27.9
Hma1.2p1_1724F.1_g299420 Hydrangea macrophylla HOM05D002319 ORTHO05D002374 6.2e-11 72.4 249 29.7
AT3G11590 Arabidopsis thaliana HOM05D002319 ORTHO05D002374 8.1e-11 72.0 312 28.2
arahy.Tifrunner.gnm1.ann1.EMDZ87 Arachis hypogaea HOM05D002319 ORTHO05D002374 1.1e-10 71.6 310 29.0
EL10Ac7g16832 Beta vulgaris HOM05D002319 ORTHO05D002374 1.1e-10 71.6 306 28.4
Gohir.D07G115100 Gossypium hirsutum HOM05D002319 ORTHO05D002374 1.1e-10 71.6 228 28.9
MD14G1032400 Malus domestica HOM05D002319 ORTHO05D002374 1.1e-10 71.6 308 29.2
Ca_09033_v3 Cicer arietinum L. HOM05D002319 ORTHO05D002374 1.4e-10 71.2 297 29.0
Haze_23341 Corylus avellana HOM05D002319 ORTHO05D002374 1.4e-10 71.2 292 28.8
AL3G23140 Arabidopsis lyrata HOM05D002319 ORTHO05D002374 1.8e-10 70.9 311 28.3
A05p37740 Brassica napus HOM05D002319 ORTHO05D002374 1.8e-10 70.9 309 27.5
CSS0017230 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 2.4e-10 70.5 307 28.3
Cpa.g.sc104.85 Carica papaya HOM05D002319 ORTHO05D002374 2.4e-10 70.5 160 33.8
BcaB06g25604 Brassica carinata HOM05D002319 ORTHO05D002374 3.1e-10 70.1 313 27.5
Aa31LG3G4980 Aethionema arabicum HOM05D002319 ORTHO05D002374 4.0e-10 69.7 325 28.3
CAN.G841.11 Capsicum annuum HOM05D002319 ORTHO05D002374 4.0e-10 69.7 162 33.3
FvH4_3g25790 Fragaria vesca HOM05D002319 ORTHO05D002374 4.0e-10 69.7 290 29.3
FAN11G1280 Fragaria x ananassa HOM05D002319 ORTHO05D002374 4.0e-10 69.7 290 29.3
RcHm_v2.0_Chr5g0047011 Rosa chinensis HOM05D002319 ORTHO05D002374 4.0e-10 69.7 287 29.6
PGR142G1754 Punica granatum HOM05D002319 ORTHO05D002374 5.3e-10 69.3 307 27.7
BraA05t22569Z Brassica rapa HOM05D002319 ORTHO05D002374 6.9e-10 68.9 309 27.2
Gohir.A07G111400 Gossypium hirsutum HOM05D002319 ORTHO05D002374 6.9e-10 68.9 294 28.6
MD12G1032300 Malus domestica HOM05D002319 ORTHO05D002374 6.9e-10 68.9 308 27.6
Oeu002355.1 Olea europaea HOM05D002319 ORTHO05D002374 6.9e-10 68.9 303 29.7
TPR.G23357 Trifolium pratense HOM05D002319 ORTHO05D002374 6.9e-10 68.9 310 28.4
GSVIVG01036076001 Vitis vinifera HOM05D002319 ORTHO05D002374 6.9e-10 68.9 279 31.5
Actinidia06165 Actinidia chinensis HOM05D002319 ORTHO05D002374 9.0e-10 68.6 305 28.2
Aqoxy5G02981 Aquilegia oxysepala HOM05D002319 ORTHO05D002374 9.0e-10 68.6 302 29.5
FAN21G1297 Fragaria x ananassa HOM05D002319 ORTHO05D002374 9.0e-10 68.6 290 28.6
Oeu007206.2 Olea europaea HOM05D002319 ORTHO05D002374 9.0e-10 68.6 324 28.1
RcHm_v2.0_Chr3g0474981 Rosa chinensis HOM05D002319 ORTHO05D002374 9.0e-10 68.6 317 29.0
Sp3g09830 Schrenkiella parvula HOM05D002319 ORTHO05D002374 9.0e-10 68.6 320 28.8
Hund20936 Selenicereus undatus HOM05D002319 ORTHO05D002374 1.2e-09 68.2 227 30.0
Duzib106G1473 Durio zibethinus HOM05D002319 ORTHO05D002374 1.5e-09 67.8 308 28.9
Manes.04G000800 Manihot esculenta HOM05D002319 ORTHO05D002374 1.5e-09 67.8 286 28.3
Medtr7g105430 Medicago truncatula HOM05D002319 ORTHO05D002374 1.5e-09 67.8 311 27.0
Sopen10g032670 Solanum pennellii HOM05D002319 ORTHO05D002374 1.5e-09 67.8 310 29.0
FAN16G1218 Fragaria x ananassa HOM05D002319 ORTHO05D002374 2.0e-09 67.4 291 29.9
FAN25G0943 Fragaria x ananassa HOM05D002319 ORTHO05D002374 2.0e-09 67.4 290 29.0
PSO675G5394 Papaver somniferum HOM05D002319 ORTHO05D002374 2.0e-09 67.4 305 26.2
CSS0043220 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 2.6e-09 67.0 291 29.6
Thhalv10020297m.g Eutrema salsugineum HOM05D002319 ORTHO05D002374 2.6e-09 67.0 317 28.1
FvH4_6g19640 Fragaria vesca HOM05D002319 ORTHO05D002374 2.6e-09 67.0 315 29.5
Solyc10g083190.3 Solanum lycopersicum HOM05D002319 ORTHO05D002374 4.4e-09 66.2 312 28.8
PGSC0003DMG400028158 Solanum tuberosum HOM05D002319 ORTHO05D002374 4.4e-09 66.2 308 28.6
FAN14G2633 Fragaria x ananassa HOM05D002319 ORTHO05D002374 5.8e-09 65.9 315 29.2
Hund19878 Selenicereus undatus HOM05D002319 ORTHO05D002374 5.8e-09 65.9 308 29.2
ATR0582G134 Amborella trichopoda HOM05D002319 ORTHO05D002374 7.6e-09 65.5 314 27.1
CSS0020708 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 7.6e-09 65.5 272 30.5
Carub.0003s1091 Capsella rubella HOM05D002319 ORTHO05D002374 7.6e-09 65.5 315 27.6
Cc06_g06280 Coffea canephora HOM05D002319 ORTHO05D002374 7.6e-09 65.5 300 28.7
Dinv22809 Davidia involucrata HOM05D002319 ORTHO05D002374 7.6e-09 65.5 243 30.5
FAN05G0858 Fragaria x ananassa HOM05D002319 ORTHO05D002374 9.9e-09 65.1 315 28.9
Nitab4.5_0001801g0040 Nicotiana tabacum HOM05D002319 ORTHO05D002374 9.9e-09 65.1 305 30.2
QL07p038003 Quercus lobata HOM05D002319 ORTHO05D002374 9.9e-09 65.1 317 26.5
QL93p1999_0036 Quercus lobata HOM05D002319 ORTHO05D002374 9.9e-09 65.1 317 26.5
FAN02G0757 Fragaria x ananassa HOM05D002319 ORTHO05D002374 1.3e-08 64.7 310 29.0
FAN02G3312 Fragaria x ananassa HOM05D002319 ORTHO05D002374 1.3e-08 64.7 310 29.0
CiPaw.13G132800 Carya illinoinensis HOM05D002319 ORTHO05D002374 1.7e-08 64.3 296 28.0
Lj1A258G37 Lonicera japonica HOM05D002319 ORTHO05D002374 2.2e-08 63.9 291 26.8
CiPaw.10G013300 Carya illinoinensis HOM05D002319 ORTHO05D002374 2.9e-08 63.5 313 28.8
Sed0015904 Sechium edule HOM05D002319 ORTHO05D002374 2.9e-08 63.5 313 28.4
Actinidia07263 Actinidia chinensis HOM05D002319 ORTHO05D002374 3.8e-08 63.2 297 27.6
AUR62028500 Chenopodium quinoa HOM05D002319 ORTHO05D002374 3.8e-08 63.2 162 32.1
CsaV3_3G037590 Cucumis sativus L. HOM05D002319 ORTHO05D002374 3.8e-08 63.2 304 27.0
FAN05G0934 Fragaria x ananassa HOM05D002319 ORTHO05D002374 3.8e-08 63.2 315 29.2
FAN09G1971 Fragaria x ananassa HOM05D002319 ORTHO05D002374 3.8e-08 63.2 315 28.9
Nitab4.5_0013218g0010 Nicotiana tabacum HOM05D002319 ORTHO05D002374 3.8e-08 63.2 292 28.8
AUR62028494 Chenopodium quinoa HOM05D002319 ORTHO05D002374 4.9e-08 62.8 175 30.3
MELO3C009502.2 Cucumis melo HOM05D002319 ORTHO05D002374 4.9e-08 62.8 304 27.0
Oeu048858.1 Olea europaea HOM05D002319 ORTHO05D002374 4.9e-08 62.8 279 29.0
MSTRG.21026 Avicennia marina HOM05D002319 ORTHO05D002374 6.4e-08 62.4 309 27.8
ECA238G0086 Erigeron canadensis HOM05D002319 ORTHO05D002374 8.4e-08 62.0 248 27.0
ClCG10G018640 Citrullus lanatus HOM05D002319 ORTHO05D002374 1.9e-07 60.8 259 27.0
PSO017G3861 Papaver somniferum HOM05D002319 ORTHO05D002374 3.2e-07 60.1 305 26.2
Hma1.2p1_0245F.1_g101560 Hydrangea macrophylla HOM05D002319 ORTHO05D002374 4.2e-07 59.7 290 28.6
Lj2C145T7 Lonicera japonica HOM05D002319 ORTHO05D002374 4.2e-07 59.7 317 26.5
Gohir.A05G079100 Gossypium hirsutum HOM05D002319 ORTHO05D002374 5.4e-07 59.3 286 27.3
Ah.08g210280 Amaranthus hybridus HOM05D002319 ORTHO05D002374 7.1e-07 58.9 130 33.8
Eucgr.J00528 Eucalyptus grandis HOM05D002319 ORTHO05D002374 7.1e-07 58.9 292 26.4
MD11G1170000 Malus domestica HOM05D002319 ORTHO05D002374 7.1e-07 58.9 220 28.2
PSO017G0972 Papaver somniferum HOM05D002319 ORTHO05D002374 9.3e-07 58.5 131 32.1
AUR62006251 Chenopodium quinoa HOM05D002319 ORTHO05D002374 1.2e-06 58.2 172 28.5
PSO837G0005 Papaver somniferum HOM05D002319 ORTHO05D002374 1.2e-06 58.2 229 26.6
MD03G1150600 Malus domestica HOM05D002319 ORTHO05D002374 2.7e-06 57.0 99 37.4
Peaxi162Scf00096g01114 Petunia axillaris HOM05D002319 ORTHO05D002374 2.7e-06 57.0 323 27.9
CSS0005587 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D002801 4.6e-06 56.2 86 33.7
Ciclev10027982m.g Citrus clementina HOM05D002319 ORTHO05D002374 4.6e-06 56.2 219 29.2
Cc01_g08770 Coffea canephora HOM05D002319 ORTHO05D002374 4.6e-06 56.2 313 26.2
Migut.D02408 Erythranthe guttata HOM05D002319 ORTHO05D002374 6.0e-06 55.8 296 26.7
HanXRQChr04g0100281 Helianthus annuus HOM05D002319 ORTHO05D002374 6.0e-06 55.8 286 26.2
vmacro08842 Vaccinium macrocarpon HOM05D002319 ORTHO05D002374 6.0e-06 55.8 330 26.7
Lsat_1_v5_gn_2_54721 Lactuca sativa HOM05D002319 ORTHO05D002374 7.9e-06 55.5 299 27.8
Sc20g0006510 Simmondsia chinensis HOM05D002319 ORTHO05D002374 7.9e-06 55.5 101 37.6


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