Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 1.6e-171 605.9 284 100.0
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 1.9e-140 502.7 277 81.2
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 5.5e-140 501.1 281 80.4
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 9.4e-140 500.4 281 80.1
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 2.1e-139 499.2 285 79.6
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 3.6e-139 498.4 281 80.1
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 3.6e-139 498.4 281 79.7
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.6e-139 498.4 281 79.0
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.6e-139 498.4 281 79.0
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 4.6e-139 498.0 281 79.0
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 6.1e-139 497.7 283 79.9
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 6.1e-139 497.7 281 79.4
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 7.9e-139 497.3 281 80.1
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 7.9e-139 497.3 278 81.3
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 1.0e-138 496.9 281 80.1
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.3e-138 495.7 281 79.0
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 2.3e-138 495.7 281 80.1
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 3.9e-138 495.0 281 77.9
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 3.9e-138 495.0 279 79.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 5.1e-138 494.6 281 79.0
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 6.7e-138 494.2 283 77.7
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 6.7e-138 494.2 281 80.4
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 6.7e-138 494.2 281 80.4
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 6.7e-138 494.2 279 79.2
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 8.8e-138 493.8 278 79.5
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 8.8e-138 493.8 278 80.9
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.1e-137 493.4 281 79.4
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 3.3e-137 491.9 281 78.6
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 4.3e-137 491.5 281 79.4
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 4.3e-137 491.5 281 78.3
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 5.7e-137 491.1 281 78.6
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 7.4e-137 490.7 281 78.6
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 9.7e-137 490.3 278 79.9
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.3e-136 490.0 281 79.0
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.3e-136 490.0 281 77.6
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 2.8e-136 488.8 281 77.9
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 3.7e-136 488.4 283 77.0
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.7e-136 488.4 281 79.4
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 6.3e-136 487.6 281 76.5
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 8.2e-136 487.3 281 77.6
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 8.2e-136 487.3 281 79.0
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.1e-135 486.9 279 77.4
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 1.8e-135 486.1 281 78.6
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 1.8e-135 486.1 281 78.6
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.8e-135 486.1 279 79.2
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 2.4e-135 485.7 281 77.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 4.1e-135 485.0 282 78.0
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 5.3e-135 484.6 279 76.7
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 6.9e-135 484.2 279 77.1
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 9.1e-135 483.8 281 78.6
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 9.1e-135 483.8 281 76.9
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 2.6e-134 482.3 281 77.9
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 2.6e-134 482.3 281 77.6
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 2.6e-134 482.3 281 76.2
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 4.5e-134 481.5 281 76.2
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 4.5e-134 481.5 284 76.4
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.3e-133 479.9 284 77.8
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.3e-133 479.9 281 76.2
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 2.2e-133 479.2 281 76.2
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 5.0e-133 478.0 285 74.4
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 5.0e-133 478.0 281 75.8
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 6.5e-133 477.6 276 77.9
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 8.5e-133 477.2 287 76.3
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 1.1e-132 476.9 281 77.2
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.1e-132 476.9 281 75.4
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 1.4e-132 476.5 282 77.3
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.9e-132 476.1 286 76.6
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 2.5e-132 475.7 280 77.1
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 3.2e-132 475.3 281 74.4
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 3.2e-132 475.3 284 76.8
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 9.4e-132 473.8 281 76.2
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 1.6e-131 473.0 278 75.9
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 2.7e-131 472.2 276 76.8
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 3.0e-130 468.8 281 74.4
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 5.1e-130 468.0 279 76.7
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.5e-129 466.5 298 72.8
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 4.4e-129 464.9 279 74.9
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 5.7e-129 464.5 277 76.9
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 5.7e-129 464.5 281 74.7
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.7e-128 463.0 270 74.8
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 2.2e-128 462.6 296 73.0
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 2.2e-128 462.6 277 76.2
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.7e-128 461.8 277 74.0
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 4.8e-128 461.5 277 76.5
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 6.3e-128 461.1 276 77.5
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 6.3e-128 461.1 276 77.5
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 6.3e-128 461.1 277 75.8
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 1.4e-127 459.9 277 75.1
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 1.8e-127 459.5 274 74.5
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 3.1e-127 458.8 277 75.5
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 3.1e-127 458.8 276 76.8
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 4.1e-127 458.4 276 76.8
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 5.3e-127 458.0 281 75.1
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 5.3e-127 458.0 281 75.4
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 5.3e-127 458.0 277 74.7
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 9.1e-127 457.2 277 76.5
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.5e-126 456.4 277 75.1
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.5e-126 454.9 277 74.4
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 4.5e-126 454.9 277 75.1
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.5e-126 454.9 277 74.4
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 5.9e-126 454.5 281 74.0
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 7.7e-126 454.1 277 74.7
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 1.7e-125 453.0 277 74.4
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.7e-125 453.0 280 74.6
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 3.8e-125 451.8 281 71.2
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 2.1e-123 446.0 270 74.4
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 8.0e-123 444.1 332 63.6
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 4.1e-119 431.8 246 79.3
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 5.0e-117 424.9 278 70.9
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 3.2e-116 422.2 272 71.0
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 1.2e-115 420.2 280 66.4
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 5.2e-114 414.8 233 79.8
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 2.6e-113 412.5 281 69.0
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 3.7e-112 408.7 233 78.1
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 1.6e-110 403.3 278 66.5
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 5.0e-109 398.3 275 66.5
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 4.7e-107 391.7 280 65.0
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 3.7e-104 382.1 224 79.0
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 1.8e-103 379.8 217 79.3
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 5.2e-98 361.7 195 83.1
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 4.3e-92 342.0 284 57.7
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 2.0e-81 306.6 270 56.3
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 7.5e-81 304.7 286 53.1
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 6.0e-78 295.0 166 80.1
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 3.0e-77 292.7 167 78.4
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 5.8e-73 278.5 258 50.8
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 2.4e-66 256.5 276 46.4
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 9.9e-65 251.1 278 47.8
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 8.4e-64 248.1 284 46.8
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 3.3e-60 236.1 230 50.4
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 8.7e-45 184.9 112 72.3
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 5.3e-42 175.6 103 73.8
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.7e-24 117.5 76 71.1
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 4.8e-19 99.4 59 72.9
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 2.3e-13 80.5 51 72.5
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 3.7e-11 73.2 56 57.1


User provided reference genes

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