Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0369 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 4.2e-109 398.3 236 100.0
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 9.1e-56 221.1 169 69.8
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.7e-17 94.0 154 40.3
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 6.4e-17 92.0 132 43.9
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 1.4e-16 90.9 165 36.4
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 5.4e-16 89.0 150 39.3
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 7.1e-16 88.6 154 37.0
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 2.7e-15 86.7 145 37.9
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 2.7e-15 86.7 151 39.1
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 4.6e-15 85.9 145 37.9
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 7.8e-15 85.1 149 36.9
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.0e-14 84.7 142 37.3
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.3e-14 84.3 174 35.6
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 1.7e-14 84.0 138 39.1
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 2.3e-14 83.6 143 38.5
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.3e-14 83.6 142 37.3
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 3.9e-14 82.8 145 37.2
Gohir.A09G206200 Gossypium hirsutum HOM05D003029 ORTHO05D003413 5.1e-14 82.4 142 36.6
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 6.6e-14 82.0 149 35.6
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 8.6e-14 81.6 159 37.7
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.1e-13 81.3 167 32.9
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.9e-13 80.5 159 37.1
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 3.3e-13 79.7 149 34.9
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 4.3e-13 79.3 142 36.6
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 5.6e-13 79.0 176 35.2
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 5.6e-13 79.0 149 34.9
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.6e-13 79.0 164 34.1
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 7.3e-13 78.6 159 37.1
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 9.5e-13 78.2 305 29.2
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 1.2e-12 77.8 129 36.4
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.2e-12 77.8 143 37.1
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.2e-12 77.8 137 39.4
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 2.1e-12 77.0 151 33.8
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 2.1e-12 77.0 148 36.5
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 2.8e-12 76.6 147 36.1
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 3.6e-12 76.3 147 37.4
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 3.6e-12 76.3 157 31.8
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 4.7e-12 75.9 148 35.8
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 1.4e-11 74.3 155 35.5
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.2e-11 72.4 148 37.2
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 2.6e-10 70.1 131 30.5
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 3.4e-10 69.7 143 35.7
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 3.4e-10 69.7 154 33.1
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 4.4e-10 69.3 156 34.6
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 7.6e-10 68.6 161 31.1
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 7.6e-10 68.6 140 35.7
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 9.9e-10 68.2 163 30.7
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 9.9e-10 68.2 179 29.6
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 9.9e-10 68.2 174 30.5
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 9.9e-10 68.2 156 33.3
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 1.3e-09 67.8 148 35.1
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 1.3e-09 67.8 138 34.8
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 1.7e-09 67.4 137 35.8
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 2.2e-09 67.0 150 34.7
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 2.9e-09 66.6 51 51.0
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 3.7e-09 66.2 139 34.5
CDE02G0447 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 3.7e-09 66.2 141 31.9
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 3.7e-09 66.2 166 34.3
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.7e-09 66.2 179 28.5
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 3.7e-09 66.2 192 27.1
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 3.7e-09 66.2 144 33.3
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 4.9e-09 65.9 131 30.5
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 6.4e-09 65.5 139 36.7
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 6.4e-09 65.5 134 30.6
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.4e-08 64.3 132 34.1
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 3.2e-08 63.2 160 29.4
Hund19006 Selenicereus undatus HOM05D003029 ORTHO05D003413 3.2e-08 63.2 154 30.5
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 3.2e-08 63.2 117 39.3
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 4.1e-08 62.8 142 33.1
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 5.4e-08 62.4 188 28.7
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 5.4e-08 62.4 79 40.5
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 7.1e-08 62.0 156 30.8
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 7.1e-08 62.0 156 31.4
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 7.1e-08 62.0 149 34.9
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 9.2e-08 61.6 100 36.0
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 1.2e-07 61.2 143 28.7
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 1.2e-07 61.2 148 33.8
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 2.1e-07 60.5 31 74.2
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 2.1e-07 60.5 137 30.7
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 2.7e-07 60.1 76 38.2
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 2.7e-07 60.1 43 60.5
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 2.7e-07 60.1 136 33.1
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 2.7e-07 60.1 144 29.9
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 4.6e-07 59.3 151 30.5
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 4.6e-07 59.3 32 78.1
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 4.6e-07 59.3 157 27.4
Psat5g100760 Pisum sativum HOM05D003029 ORTHO05D003413 4.6e-07 59.3 38 63.2
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 6.0e-07 58.9 144 32.6
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 7.8e-07 58.5 157 33.8
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 7.8e-07 58.5 32 68.8
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 7.8e-07 58.5 154 30.5
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 1.0e-06 58.2 137 31.4
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 1.0e-06 58.2 32 75.0
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 1.0e-06 58.2 32 75.0
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.0e-06 58.2 32 68.8
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 1.0e-06 58.2 32 68.8
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.3e-06 57.8 212 27.8
unitig_22.g6828 Utricularia gibba HOM05D003029 ORTHO05D003413 1.3e-06 57.8 34 70.6
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 1.3e-06 57.8 36 61.1
CDE05G1204 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 1.7e-06 57.4 30 83.3
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 1.7e-06 57.4 32 78.1
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 1.7e-06 57.4 32 78.1
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 1.7e-06 57.4 32 78.1
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 1.7e-06 57.4 143 30.8
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 1.7e-06 57.4 157 28.7
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 1.7e-06 57.4 41 56.1
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 1.7e-06 57.4 32 78.1
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 2.3e-06 57.0 32 78.1
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 2.3e-06 57.0 50 48.0
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 2.3e-06 57.0 36 72.2
Potri.001G319600 Populus trichocarpa HOM05D003029 ORTHO05D003413 2.3e-06 57.0 32 75.0
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 3.0e-06 56.6 138 26.1
Dinv27203 Davidia involucrata HOM05D003029 ORTHO05D003413 3.0e-06 56.6 32 75.0
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 3.0e-06 56.6 32 75.0
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 3.0e-06 56.6 32 75.0
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 3.0e-06 56.6 32 71.9
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 3.0e-06 56.6 32 75.0
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.0e-06 56.6 160 26.9
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 3.9e-06 56.2 50 52.0
Potri.001G319500 Populus trichocarpa HOM05D003029 ORTHO05D003413 3.9e-06 56.2 32 75.0
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 3.9e-06 56.2 31 77.4
CANSAT78G1052 Cannabis sativa HOM05D003029 ORTHO05D003413 5.1e-06 55.8 32 71.9
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 5.1e-06 55.8 31 71.0
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 5.1e-06 55.8 133 32.3
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.1e-06 55.8 32 75.0
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 6.6e-06 55.5 39 59.0
Dinv38178 Davidia involucrata HOM05D003029 ORTHO05D003413 6.6e-06 55.5 32 71.9
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 6.6e-06 55.5 149 30.2
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 8.6e-06 55.1 32 71.9
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 8.6e-06 55.1 32 71.9
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 8.6e-06 55.1 29 72.4


User provided reference genes

Program Settings