Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0348 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 5.3e-109 399.8 869 100.0
CDE05G2510 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 8.5e-51 206.5 183 57.9
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 3.2e-29 134.8 164 43.3
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 2.7e-28 131.7 157 45.9
TAR633G1425 Trochodendron aralioides HOM05D005764 ORTHO05D006600 1.5e-26 125.9 187 39.6
ATR0317G130 Amborella trichopoda HOM05D005764 ORTHO05D006600 9.5e-26 123.2 170 42.9
QL04p006829 Quercus lobata HOM05D000056 ORTHO05D000019 8.1e-25 120.2 164 40.2
QL04p061529 Quercus lobata HOM05D005764 ORTHO05D006600 8.1e-25 120.2 164 40.2
Haze_07107 Corylus avellana HOM05D005764 ORTHO05D006600 5.2e-24 117.5 165 40.0
Dinv13731 Davidia involucrata HOM05D005764 ORTHO05D006600 6.4e-22 110.5 187 36.4
QL04p067861 Quercus lobata HOM05D005764 ORTHO05D006600 1.1e-21 109.8 164 37.8
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.4e-21 109.4 168 38.1
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 2.4e-21 108.6 177 37.9
Dinv18433 Davidia involucrata HOM05D005764 ORTHO05D006600 5.4e-21 107.5 133 44.4
PGR042G2810 Punica granatum HOM05D005764 ORTHO05D006600 2.1e-20 105.5 176 35.2
CSS0040489 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 6.0e-20 104.0 204 38.7
MD06G1131900 Malus domestica HOM05D005764 ORTHO05D006600 6.0e-20 104.0 173 34.7
Sc04g0000230 Simmondsia chinensis HOM05D005764 ORTHO05D006600 7.8e-20 103.6 167 37.1
Actinidia07859 Actinidia chinensis HOM05D005764 ORTHO05D006600 1.7e-19 102.4 163 36.2
AUR62009526 Chenopodium quinoa HOM05D005764 ORTHO05D006600 1.7e-19 102.4 157 38.2
AUR62034761 Chenopodium quinoa HOM05D005764 ORTHO05D006600 1.7e-19 102.4 176 36.4
AUR62041690 Chenopodium quinoa HOM05D005764 ORTHO05D006600 1.7e-19 102.4 176 36.4
Dinv21306 Davidia involucrata HOM05D005764 ORTHO05D006600 2.3e-19 102.1 164 37.2
ClCG02G014020 Citrullus lanatus HOM05D005764 ORTHO05D006600 3.9e-19 101.3 165 35.8
Ciclev10010938m.g Citrus clementina HOM05D005764 ORTHO05D006600 3.9e-19 101.3 163 38.0
QL11p027136 Quercus lobata HOM05D005764 ORTHO05D006600 5.1e-19 100.9 171 38.6
vmacro12075 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 5.1e-19 100.9 149 38.3
FAN18G2453 Fragaria x ananassa HOM05D005764 ORTHO05D006600 1.1e-18 99.8 163 35.0
Haze_12617 Corylus avellana HOM05D005764 ORTHO05D006600 1.9e-18 99.0 189 33.9
FvH4_5g09340 Fragaria vesca HOM05D005764 ORTHO05D006600 3.3e-18 98.2 163 34.4
Rhsim08G0196300 Rhododendron simsii HOM05D005764 ORTHO05D006600 3.3e-18 98.2 166 36.7
Cfa014216 Carpinus fangiana HOM05D005764 ORTHO05D006600 4.3e-18 97.8 189 33.9
MD14G1148300 Malus domestica HOM05D005764 ORTHO05D006600 4.3e-18 97.8 173 33.5
Manes.06G126050 Manihot esculenta HOM05D005764 ORTHO05D006600 9.5e-18 96.7 189 30.7
Haze_12606 Corylus avellana HOM05D005764 ORTHO05D006600 1.2e-17 96.3 189 33.3
Ciclev10033858m.g Citrus clementina HOM05D005764 ORTHO05D006600 1.6e-17 95.9 167 33.5
Nitab4.5_0000663g0160 Nicotiana tabacum HOM05D005764 ORTHO05D006600 2.8e-17 95.1 161 33.5
Rhsim06G0177300 Rhododendron simsii HOM05D005764 ORTHO05D006600 2.8e-17 95.1 176 35.8
vmacro19175 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 2.8e-17 95.1 166 36.1
Ah.11g046810 Amaranthus hybridus HOM05D005764 ORTHO05D006600 4.7e-17 94.4 155 40.0
Aqoxy7G02956 Aquilegia oxysepala HOM05D005764 ORTHO05D006600 4.7e-17 94.4 166 36.1
Cpa.g.sc211.34 Carica papaya HOM05D005764 ORTHO05D006600 4.7e-17 94.4 174 34.5
Sed0013038 Sechium edule HOM05D005764 ORTHO05D006600 8.1e-17 93.6 165 34.5
CsaV3_5G006140 Cucumis sativus L. HOM05D005764 ORTHO05D006600 1.1e-16 93.2 156 34.6
Nitab4.5_0008892g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 1.4e-16 92.8 161 34.8
Atru.chr6.1906 Acer truncatum HOM05D005764 ORTHO05D006600 1.8e-16 92.4 183 36.6
HanXRQChr16g0498891 Helianthus annuus HOM05D005764 ORTHO05D006600 5.2e-16 90.9 173 34.7
Lj1A1039T30 Lonicera japonica HOM05D005764 ORTHO05D006600 5.2e-16 90.9 132 38.6
Gorai.003G116400 Gossypium raimondii HOM05D005764 ORTHO05D006600 1.2e-15 89.7 167 31.7
RcHm_v2.0_Chr7g0188811 Rosa chinensis HOM05D005764 ORTHO05D006600 1.2e-15 89.7 166 31.3
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 2.0e-15 89.0 165 33.3
vmacro19171 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 2.6e-15 88.6 157 36.3
Duzib205G1181 Durio zibethinus HOM05D005764 ORTHO05D006600 3.4e-15 88.2 194 32.0
CAN.G843.18 Capsicum annuum HOM05D005764 ORTHO05D006600 4.4e-15 87.8 159 32.1
Lj1C797T15 Lonicera japonica HOM05D005764 ORTHO05D006600 7.6e-15 87.0 160 34.4
Lj1C797T16 Lonicera japonica HOM05D005764 ORTHO05D006600 7.6e-15 87.0 160 34.4
vmacro19173 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 9.9e-15 86.7 166 34.9
Potri.015G105400 Populus trichocarpa HOM05D005764 ORTHO05D006600 1.3e-14 86.3 189 29.1
Lsat_1_v5_gn_4_84661 Lactuca sativa HOM05D005764 ORTHO05D006600 2.9e-14 85.1 179 34.6
CSS0045653 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 4.9e-14 84.3 188 29.8
Thecc.01G197100 Theobroma cacao HOM05D005764 ORTHO05D006600 4.9e-14 84.3 175 33.7
DCAR_016460 Daucus carota HOM05D005764 ORTHO05D006600 8.4e-14 83.6 167 33.5
CSS0031853 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 1.4e-13 82.8 166 31.9
TWI14G0891 Tripterygium wilfordii HOM05D005764 ORTHO05D006600 1.9e-13 82.4 164 32.3
DCAR_021406 Daucus carota HOM05D005764 ORTHO05D006600 2.4e-13 82.0 162 32.1
AT5G61990 Arabidopsis thaliana HOM05D005764 ORTHO05D006600 3.2e-13 81.6 188 31.9
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 3.2e-13 81.6 145 35.9
EL10Ac5g11299 Beta vulgaris HOM05D005764 ORTHO05D006600 1.2e-12 79.7 131 35.9
Atru.chr6.3404 Acer truncatum HOM05D005764 ORTHO05D006600 1.6e-12 79.3 177 33.3
AL8G38750 Arabidopsis lyrata HOM05D005764 ORTHO05D006600 2.1e-12 79.0 171 32.7
Thhalv10003592m.g Eutrema salsugineum HOM05D005764 ORTHO05D006600 4.6e-12 77.8 168 32.7
MSTRG.22851 Avicennia marina HOM05D005764 ORTHO05D006600 6.0e-12 77.4 178 30.3
Atru.chr1.4150 Acer truncatum HOM05D005764 ORTHO05D006600 7.8e-12 77.0 168 32.7
CARHR275790 Cardamine hirsuta HOM05D005764 ORTHO05D006600 7.8e-12 77.0 169 30.8
Sopen03g037190 Solanum pennellii HOM05D005764 ORTHO05D006600 1.3e-11 76.3 145 34.5
Solyc03g118280.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 1.7e-11 75.9 145 34.5
Aa31LG11G1530 Aethionema arabicum HOM05D005764 ORTHO05D006600 2.3e-11 75.5 155 31.6
CDE02G2785 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 3.0e-11 75.1 166 31.3
HanXRQChr09g0273911 Helianthus annuus HOM05D005764 ORTHO05D006600 5.1e-11 74.3 183 31.7
RcHm_v2.0_Chr2g0162681 Rosa chinensis HOM05D005764 ORTHO05D006600 1.5e-10 72.8 149 31.5
CAN.G177.15 Capsicum annuum HOM05D005764 ORTHO05D006600 3.3e-10 71.6 174 29.9
Sopen07g023950 Solanum pennellii HOM05D005764 ORTHO05D006600 3.3e-10 71.6 149 31.5
SGA_v2.0_scaffold74G24732 Striga asiatica HOM05D005764 ORTHO05D006600 3.3e-10 71.6 169 29.0
Solyc07g045400.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 7.3e-10 70.5 151 31.8
PGSC0003DMG400017401 Solanum tuberosum HOM05D005764 ORTHO05D006600 9.6e-10 70.1 146 32.2
THA.LOC104804672 Tarenaya hassleriana HOM05D005764 ORTHO05D006600 1.2e-09 69.7 164 30.5
SalBow7G2732 Salvia bowleyana HOM05D005764 ORTHO05D006600 2.8e-09 68.6 178 32.0
MELO3C011746.2 Cucumis melo HOM05D005764 ORTHO05D006600 4.7e-09 67.8 106 34.0
Atru.chr6.3419 Acer truncatum HOM05D005764 ORTHO05D006600 2.4e-08 65.5 121 35.5
vmacro09539 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 1.2e-07 63.2 115 31.3
Actinidia04364 Actinidia chinensis HOM05D004824 ORTHO05D003903 3.4e-07 61.6 116 28.4
CSS0029730 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 4.4e-07 61.2 114 30.7
Rhsim04G0218400 Rhododendron simsii HOM05D004020 ORTHO05D004735 4.4e-07 61.2 107 30.8
EL10Ac8g19216 Beta vulgaris HOM05D004824 ORTHO05D003903 9.9e-07 60.1 115 26.1
Atru.chr6.3407 Acer truncatum HOM05D005764 ORTHO05D006600 1.7e-06 59.3 120 35.8
CSS0000296 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 1.7e-06 59.3 114 29.8
Migut.D01549 Erythranthe guttata HOM05D004824 ORTHO05D003903 3.8e-06 58.2 131 26.7
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 3.8e-06 58.2 108 27.8
Prupe.5G142900 Prunus persica HOM05D005764 ORTHO05D006600 8.4e-06 57.0 175 25.7


User provided reference genes

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