Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 2.0e-120 436.0 260 100.0
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 2.6e-48 196.4 259 49.4
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 1.0e-47 194.5 255 48.2
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 1.0e-47 194.5 255 48.2
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 4.2e-46 189.1 267 53.2
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 9.4e-46 188.0 267 53.9
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 9.4e-46 188.0 261 46.0
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 8.0e-45 184.9 261 54.4
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 2.3e-44 183.3 257 53.7
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 3.0e-44 183.0 256 49.2
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 1.5e-43 180.6 257 54.1
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 2.6e-43 179.9 257 54.1
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 5.7e-43 178.7 258 49.6
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 5.7e-43 178.7 263 51.3
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 7.5e-43 178.3 258 54.3
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 9.7e-43 177.9 257 54.9
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 9.7e-43 177.9 260 53.5
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 1.7e-42 177.2 256 49.6
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 2.8e-42 176.4 258 54.3
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 2.8e-42 176.4 258 52.3
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.7e-42 176.0 258 54.3
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 3.7e-42 176.0 258 54.3
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 3.7e-42 176.0 262 53.1
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 4.8e-42 175.6 265 44.2
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 8.2e-42 174.9 255 54.1
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 1.4e-41 174.1 263 45.2
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.8e-41 173.7 259 45.6
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 1.8e-41 173.7 255 50.2
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 2.4e-41 173.3 258 48.4
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 2.4e-41 173.3 258 52.3
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 3.1e-41 172.9 262 52.3
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 4.1e-41 172.6 265 51.7
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 5.3e-41 172.2 255 52.5
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 1.2e-40 171.0 259 47.5
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 2.0e-40 170.2 259 43.6
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 2.0e-40 170.2 258 50.0
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 3.5e-40 169.5 258 50.8
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 5.9e-40 168.7 258 50.8
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 5.9e-40 168.7 261 46.7
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 7.7e-40 168.3 257 44.0
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 2.2e-39 166.8 265 48.3
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 2.9e-39 166.4 264 48.9
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 2.9e-39 166.4 257 45.5
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 8.5e-39 164.9 259 51.4
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 1.5e-38 164.1 258 50.0
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 1.5e-38 164.1 264 45.1
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 1.9e-38 163.7 260 50.4
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 2.5e-38 163.3 265 44.9
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.6e-37 160.6 257 51.8
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 2.7e-37 159.8 199 57.8
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 2.7e-37 159.8 260 50.4
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 3.6e-37 159.5 256 44.5
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 1.8e-36 157.1 257 46.7
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.3e-36 156.8 244 45.1
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 5.2e-36 155.6 262 48.9
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 2.6e-35 153.3 258 43.4
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.4e-35 152.9 255 48.2
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 9.8e-35 151.4 225 50.2
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 1.7e-34 150.6 261 50.2
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.8e-34 149.8 262 49.6
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 2.4e-33 146.7 263 48.3
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 4.1e-33 146.0 273 47.6
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 1.2e-32 144.4 263 44.1
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 1.6e-32 144.1 244 49.2
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 1.6e-32 144.1 244 49.2
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 2.7e-32 143.3 265 48.3
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 4.5e-32 142.5 257 47.1
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 1.0e-31 141.4 270 44.8
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 2.3e-31 140.2 265 46.4
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 2.1e-29 133.7 225 50.2
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 2.8e-29 133.3 263 46.0
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 2.3e-28 130.2 206 44.2
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 4.0e-28 129.4 267 45.7
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 2.0e-27 127.1 255 39.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 1.3e-26 124.4 261 44.8
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 1.7e-26 124.0 260 45.0
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.2e-26 123.6 262 46.9
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 4.1e-25 119.4 259 42.5
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 3.5e-24 116.3 101 58.4
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 4.5e-24 115.9 255 43.5
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 4.5e-24 115.9 264 44.3
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 5.9e-24 115.5 260 38.5
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 1.3e-23 114.4 256 43.0
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 1.7e-23 114.0 261 34.9
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 2.9e-23 113.2 263 43.3
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 1.1e-22 111.3 257 43.2
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 1.6e-21 107.5 270 36.3
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 2.1e-21 107.1 264 38.3
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 2.1e-21 107.1 265 43.4
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 3.6e-21 106.3 135 48.1
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 2.3e-20 103.6 269 39.4
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 3.0e-20 103.2 271 32.8
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 6.8e-20 102.1 269 40.9
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 6.8e-20 102.1 258 41.9
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 6.8e-20 102.1 212 39.2
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 1.2e-19 101.3 211 43.1
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 4.4e-19 99.4 262 41.6
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 2.2e-18 97.1 271 39.9
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 6.4e-18 95.5 271 39.5
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 1.8e-17 94.0 126 46.0
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 2.4e-17 93.6 271 35.8
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 2.4e-17 93.6 123 45.5
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 3.2e-17 93.2 255 34.1
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 4.1e-17 92.8 271 38.4
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 7.0e-17 92.0 278 36.0
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 2.7e-16 90.1 258 39.1
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 3.9e-15 86.3 259 40.9
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 5.0e-15 85.9 169 40.8
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 2.5e-14 83.6 186 37.6
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.8e-13 80.1 289 36.3
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 8.9e-12 75.1 258 27.5
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 8.9e-12 75.1 194 40.2
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.7e-10 70.9 92 48.9
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 2.2e-10 70.5 65 84.6
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 2.2e-10 70.5 192 32.8
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 4.9e-10 69.3 286 28.3
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 2.7e-08 63.5 37 78.4
BolC3t16251H Brassica oleracea HOM05D004723 ORTHO05D019910 1.3e-07 61.2 86 41.9
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 1.7e-07 60.8 326 32.5
C03p39890 Brassica napus HOM05D004723 ORTHO05D019910 1.1e-06 58.2 86 43.0


User provided reference genes

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