Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.3e-158 561.6 272 100.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 3.2e-89 332.4 306 56.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.7e-85 320.1 305 54.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 2.8e-85 319.3 304 54.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 5.9e-83 311.6 310 51.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.5e-81 307.0 306 52.0
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.5e-81 306.2 305 52.8
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 7.2e-81 304.7 273 56.8
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.1e-80 303.1 305 52.5
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.6e-80 302.4 306 51.3
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 8.0e-80 301.2 298 52.0
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 8.0e-80 301.2 299 52.2
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.4e-79 300.4 288 54.9
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.8e-79 300.1 275 56.7
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.3e-79 299.7 301 51.2
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.3e-79 299.7 300 51.3
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.0e-79 299.3 308 49.7
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 8.8e-79 297.7 306 51.0
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.2e-78 297.4 308 50.6
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.5e-78 297.0 316 50.6
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.0e-78 296.6 306 52.3
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.0e-78 296.6 311 51.4
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.4e-78 295.8 305 51.1
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 4.4e-78 295.4 306 50.7
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 7.5e-78 294.7 307 51.1
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 7.5e-78 294.7 306 50.7
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 9.8e-78 294.3 274 55.8
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.7e-77 293.5 307 51.5
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.7e-77 293.5 302 50.7
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.8e-77 292.7 306 51.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.7e-77 292.4 303 51.8
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.7e-77 292.4 283 53.0
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.1e-76 290.8 286 52.8
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.8e-76 290.0 305 48.9
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 3.1e-76 289.3 302 50.7
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.4e-76 288.5 302 50.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 5.4e-76 288.5 302 49.7
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 7.0e-76 288.1 284 51.4
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 2.0e-75 286.6 283 51.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.5e-75 285.8 301 49.8
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 3.5e-75 285.8 284 53.2
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 4.5e-75 285.4 288 51.4
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.9e-75 285.0 303 49.5
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 7.7e-75 284.6 303 49.5
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.0e-74 284.3 270 54.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.2e-74 283.1 280 51.1
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.9e-74 282.7 295 49.8
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.9e-74 282.7 272 53.7
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 6.5e-74 281.6 299 51.8
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 8.5e-74 281.2 301 49.5
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.5e-73 280.4 290 51.0
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.5e-73 279.6 303 48.5
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.2e-73 279.3 295 49.5
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.5e-73 278.5 288 51.4
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.2e-72 277.3 299 50.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.6e-72 276.9 302 49.0
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.7e-72 276.2 299 49.5
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 2.7e-72 276.2 279 52.3
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.6e-72 275.8 279 52.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.7e-72 275.4 300 48.3
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.7e-72 275.4 279 52.7
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 6.1e-72 275.0 279 52.0
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 5.2e-71 271.9 272 54.4
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.2e-70 270.8 233 58.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.2e-70 270.8 290 50.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.4e-70 269.2 312 47.4
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 3.4e-70 269.2 299 47.5
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 4.4e-70 268.9 279 50.2
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 4.4e-70 268.9 291 49.8
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.7e-69 266.9 282 49.3
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.7e-69 266.9 304 48.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 6.3e-69 265.0 279 49.5
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.1e-68 264.2 293 49.5
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 9.2e-68 261.2 281 47.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 9.2e-68 261.2 282 48.9
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 9.2e-68 261.2 273 51.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.2e-67 260.8 254 52.8
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.6e-67 260.4 276 49.6
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.6e-67 260.4 282 48.6
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.0e-67 260.0 279 49.5
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.0e-67 260.0 276 51.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.7e-67 259.6 282 48.6
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.7e-67 259.6 282 48.6
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.5e-67 259.2 282 48.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 3.5e-67 259.2 276 49.6
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 4.5e-67 258.8 282 48.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 5.9e-67 258.5 280 49.3
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.0e-66 257.7 292 49.7
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 4.7e-64 248.8 305 45.9
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 6.1e-64 248.4 294 47.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.5e-62 241.5 300 45.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.0e-59 233.4 335 42.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.5e-59 232.6 295 46.8
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.1e-57 227.6 308 43.8
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.8e-56 223.0 266 47.0
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.8e-55 220.3 278 44.6
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 6.8e-55 218.4 297 41.1
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.4e-52 209.9 180 58.3
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 7.0e-52 208.4 182 54.9
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.6e-51 205.7 192 52.6
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.0e-50 204.5 192 52.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 3.0e-50 203.0 275 42.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.6e-48 196.1 169 57.4
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 4.7e-48 195.7 169 56.8
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.7e-43 179.9 154 55.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 3.0e-42 176.4 156 55.8
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 2.7e-35 153.3 221 42.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.9e-34 149.4 208 40.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 9.9e-30 134.8 80 73.8
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 6.0e-27 125.6 236 35.2
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 7.3e-25 118.6 80 70.0
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.4e-20 102.4 117 50.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.1e-19 100.5 167 36.5
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.8e-18 97.4 183 35.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.1e-10 69.3 55 56.4
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 6.7e-10 68.9 42 73.8
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.5e-09 67.8 67 47.8
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 9.6e-09 65.1 103 35.9


User provided reference genes

Program Settings