Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0280 Ceratophyllum demersum HOM05D055448 ORTHO05D003264 5.4e-94 347.8 197 100.0
CDE05G3661 Ceratophyllum demersum HOM05D055448 ORTHO05D003264 3.6e-74 282.0 197 76.6
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 3.8e-15 85.9 217 37.3
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 5.0e-15 85.5 200 36.0
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 5.0e-15 85.5 230 37.4
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 4.2e-14 82.4 212 34.0
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 1.4e-12 77.4 214 36.0
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 3.0e-12 76.3 214 35.0
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 3.0e-12 76.3 242 33.9
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 1.5e-11 73.9 212 34.0
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.5e-11 73.9 223 33.6
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 5.7e-11 72.0 230 32.2
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 1.3e-10 70.9 195 31.8
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 1.7e-10 70.5 196 37.2
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 3.7e-10 69.3 199 31.7
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 6.3e-10 68.6 195 32.3
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 8.2e-10 68.2 201 31.8
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 1.1e-09 67.8 203 34.0
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 1.1e-09 67.8 213 33.8
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 1.1e-09 67.8 227 33.0
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.8e-09 67.0 101 43.6
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.8e-09 67.0 227 32.2
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 2.4e-09 66.6 215 31.2
CDE09G0805 Ceratophyllum demersum HOM05D003331 ORTHO05D003264 2.4e-09 66.6 184 32.1
Actinidia17008 Actinidia chinensis HOM05D003331 ORTHO05D003264 3.1e-09 66.2 188 35.6
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.1e-09 66.2 187 34.8
Dinv40128 Davidia involucrata HOM05D003331 ORTHO05D003264 7.0e-09 65.1 195 32.8
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 7.0e-09 65.1 101 42.6
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 7.0e-09 65.1 219 30.1
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 1.6e-08 63.9 202 32.7
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 2.6e-08 63.2 209 32.5
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 2.6e-08 63.2 257 31.1
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 3.5e-08 62.8 189 31.2
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 3.5e-08 62.8 187 31.6
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.5e-08 62.4 186 34.4
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 4.5e-08 62.4 214 30.4
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 5.9e-08 62.0 233 33.9
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 5.9e-08 62.0 207 33.3
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 1.0e-07 61.2 87 43.7
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 1.0e-07 61.2 198 30.3
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 1.3e-07 60.8 193 31.6
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 1.7e-07 60.5 187 28.9
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.7e-07 60.5 120 40.8
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.7e-07 60.5 229 32.3
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 2.2e-07 60.1 222 31.5
SalBow3G1427 Salvia bowleyana HOM05D003331 ORTHO05D003264 2.9e-07 59.7 219 30.6
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 3.8e-07 59.3 189 30.7
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 5.0e-07 58.9 196 32.7
BcaB07g31705 Brassica carinata HOM05D003331 ORTHO05D003264 5.0e-07 58.9 188 31.4
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 5.0e-07 58.9 195 30.8
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 6.5e-07 58.5 219 33.3
Sabra02G0014700 Salix brachista HOM05D003331 ORTHO05D003264 6.5e-07 58.5 196 32.7
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 8.5e-07 58.2 186 31.2
Cc07_g11170 Coffea canephora HOM05D003331 ORTHO05D003264 1.1e-06 57.8 221 28.5
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 1.5e-06 57.4 190 32.1
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 1.9e-06 57.0 244 29.9
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 2.5e-06 56.6 234 30.8
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.5e-06 56.6 188 33.0
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 2.5e-06 56.6 223 31.4
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 3.2e-06 56.2 189 29.1
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 4.2e-06 55.8 211 29.4
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.2e-06 55.8 223 30.5
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 7.2e-06 55.1 205 28.8
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 7.2e-06 55.1 132 34.8
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 9.4e-06 54.7 120 39.2


User provided reference genes

Program Settings