Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 9.0e-88 327.0 180 100.0
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.1e-13 80.9 80 52.5
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 2.5e-13 79.7 53 69.8
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 5.6e-13 78.6 62 61.3
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 3.6e-12 75.9 78 55.1
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 3.6e-12 75.9 101 48.5
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 8.0e-12 74.7 77 53.2
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 1.4e-11 73.9 70 62.9
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 1.4e-11 73.9 63 60.3
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.8e-11 73.6 111 45.0
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 2.3e-11 73.2 64 57.8
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 2.3e-11 73.2 63 63.5
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 3.1e-11 72.8 109 45.0
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 5.2e-11 72.0 67 52.2
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 6.8e-11 71.6 88 51.1
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 6.8e-11 71.6 67 56.7
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 8.9e-11 71.2 76 50.0
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 8.9e-11 71.2 55 58.2
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 1.2e-10 70.9 69 55.1
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 2.0e-10 70.1 111 45.0
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 2.0e-10 70.1 173 45.7
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 2.6e-10 69.7 107 43.0
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 3.4e-10 69.3 68 55.9
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 3.4e-10 69.3 40 77.5
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 3.4e-10 69.3 70 51.4
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 4.4e-10 68.9 62 58.1
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 5.8e-10 68.6 40 75.0
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 7.5e-10 68.2 53 60.4
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 7.5e-10 68.2 76 53.9
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 9.8e-10 67.8 57 54.4
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 9.8e-10 67.8 40 77.5
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 9.8e-10 67.8 63 58.7
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 2.2e-09 66.6 120 40.0
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.2e-09 66.6 76 52.6
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.2e-09 66.6 55 58.2
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 2.9e-09 66.2 63 57.1
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 2.9e-09 66.2 76 52.6
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.9e-09 66.2 59 59.3
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 3.7e-09 65.9 106 46.2
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 4.9e-09 65.5 57 57.9
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 6.4e-09 65.1 68 54.4
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.1e-08 64.3 52 61.5
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.1e-08 64.3 52 61.5
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 1.4e-08 63.9 66 59.1
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 2.4e-08 63.2 81 46.9
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 5.4e-08 62.0 76 46.1
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 7.0e-08 61.6 75 49.3
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 9.2e-08 61.2 77 49.4
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 1.2e-07 60.8 67 49.3
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 1.6e-07 60.5 63 49.2
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 2.0e-07 60.1 74 50.0
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 2.7e-07 59.7 80 43.8
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 2.7e-07 59.7 80 46.2
HPP92_005903 Vanilla planifolia HOM05D048504 ORTHO05D009740 3.5e-07 59.3 65 49.2
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 7.8e-07 58.2 154 44.2
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 1.0e-06 57.8 110 42.7
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 1.7e-06 57.0 75 46.7
HPP92_009398 Vanilla planifolia HOM05D048504 ORTHO05D009740 3.9e-06 55.8 114 38.6
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 3.9e-06 55.8 65 49.2
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 5.0e-06 55.5 70 47.1
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 6.6e-06 55.1 78 44.9
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 6.6e-06 55.1 66 50.0
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 6.6e-06 55.1 106 39.6
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 8.6e-06 54.7 63 46.0


User provided reference genes

Program Settings