Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0211 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 3.7e-241 837.8 423 100.0
CDE02G3131 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 5.2e-94 349.0 454 49.3
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 3.8e-36 156.8 521 29.6
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.9e-35 154.5 499 28.3
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 2.7e-34 150.6 507 28.2
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 4.3e-32 143.3 520 28.5
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 1.6e-31 141.4 520 26.7
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 1.6e-31 141.4 522 28.4
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 1.6e-31 141.4 525 28.4
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 2.8e-31 140.6 449 31.2
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 2.8e-31 140.6 522 26.6
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 4.8e-31 139.8 526 27.2
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 1.4e-30 138.3 522 27.4
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 6.9e-30 136.0 330 32.4
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 7.6e-29 132.5 524 26.7
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 3.2e-27 127.1 502 27.1
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 4.2e-27 126.7 525 28.2
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 5.5e-27 126.3 545 27.3
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 9.3e-27 125.6 541 26.6
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 2.7e-26 124.0 521 26.3
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 2.3e-25 120.9 533 27.4
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 9.7e-24 115.5 525 25.9
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 2.2e-23 114.4 489 27.2
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 4.8e-23 113.2 314 31.5
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 4.8e-23 113.2 525 26.5
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 1.1e-22 112.1 444 27.0
Manes.13G068800 Manihot esculenta HOM05D005385 ORTHO05D006768 3.1e-22 110.5 241 33.6
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 6.9e-22 109.4 489 27.2
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 9.0e-22 109.0 355 30.4
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.5e-21 108.2 398 26.9
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 5.9e-21 106.3 530 25.8
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 1.7e-20 104.8 523 27.0
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 5.0e-20 103.2 302 29.8
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 8.5e-20 102.4 199 32.7
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 1.1e-19 102.1 283 28.3
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 1.4e-19 101.7 322 29.2
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.4e-19 101.7 301 27.6
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 3.2e-19 100.5 523 25.8
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 4.2e-19 100.1 372 25.0
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 5.5e-19 99.8 449 26.5
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 7.2e-19 99.4 252 30.2
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 7.2e-19 99.4 373 25.5
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 7.2e-19 99.4 267 27.0
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 1.2e-18 98.6 317 26.8
Nn8g40525 Nelumbo nucifera HOM05D005385 ORTHO05D006768 2.1e-18 97.8 190 30.0
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 3.6e-18 97.1 332 27.7
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 3.6e-18 97.1 324 30.2
MD17G1100500 Malus domestica HOM05D005385 ORTHO05D006768 4.6e-18 96.7 253 30.8
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 1.0e-17 95.5 339 29.2
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 3.9e-17 93.6 604 23.3
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 5.1e-17 93.2 271 29.2
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 1.1e-16 92.0 346 28.0
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 1.5e-16 91.7 327 28.4
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 2.0e-16 91.3 352 29.5
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea HOM05D005385 ORTHO05D006768 3.3e-16 90.5 312 29.2
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 7.4e-16 89.4 345 25.8
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 1.7e-15 88.2 319 29.2
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea HOM05D005385 ORTHO05D006768 2.2e-15 87.8 313 28.1
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 4.8e-15 86.7 277 26.4
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 4.8e-15 86.7 194 29.4
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 6.3e-15 86.3 194 29.4
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 8.2e-15 85.9 194 29.9
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.4e-14 85.1 215 27.9
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 1.8e-14 84.7 275 28.0
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 3.1e-14 84.0 262 30.2
SGA_v2.0_scaffold49G18342 Striga asiatica HOM05D005385 ORTHO05D006768 5.3e-14 83.2 246 27.2
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 1.2e-13 82.0 349 25.5
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 2.6e-13 80.9 269 29.0
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 7.7e-13 79.3 194 27.8
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 1.0e-12 79.0 177 28.2
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 6.5e-12 76.3 434 27.4
Sc06g0009590 Simmondsia chinensis HOM05D005385 ORTHO05D006768 2.5e-11 74.3 149 32.2
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 3.2e-11 73.9 328 25.0
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 3.2e-11 73.9 462 24.2
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 4.2e-11 73.6 304 28.3
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 4.2e-11 73.6 348 25.6
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 7.2e-11 72.8 324 26.9
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 9.4e-11 72.4 452 24.8
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 1.6e-10 71.6 322 25.2
HanXRQChr16g0506711 Helianthus annuus HOM05D005385 ORTHO05D006768 3.0e-09 67.4 286 26.9
ECA236G2918 Erigeron canadensis HOM05D005385 ORTHO05D006768 5.1e-09 66.6 390 25.6
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 2.0e-08 64.7 313 24.6
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 3.3e-08 63.9 305 27.9
MD17G1100200 Malus domestica HOM05D005385 ORTHO05D006768 5.7e-08 63.2 208 29.3
BraA08t35560Z Brassica rapa HOM05D005385 ORTHO05D006768 9.7e-08 62.4 208 27.4
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 6.3e-07 59.7 161 32.3
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.4e-06 58.5 194 29.9
Hma1.2p1_0895F.1_g233780 Hydrangea macrophylla HOM05D005385 ORTHO05D006768 3.1e-06 57.4 297 25.3
Ah.03g136860 Amaranthus hybridus HOM05D005385 ORTHO05D006768 4.1e-06 57.0 343 28.6
EL10Ac6g14187 Beta vulgaris HOM05D005385 ORTHO05D006768 4.1e-06 57.0 334 23.7


User provided reference genes

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