Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 5.3e-187 657.5 327 100.0
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.2e-117 427.2 253 87.7
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.1e-51 208.0 320 40.0
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 2.5e-48 196.8 277 40.8
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 1.3e-44 184.5 265 39.2
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 3.6e-42 176.4 289 37.7
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.5e-40 171.0 293 35.8
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 2.0e-40 170.6 286 33.9
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 5.7e-40 169.1 305 32.8
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 1.3e-39 167.9 292 34.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 2.8e-39 166.8 276 37.7
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 1.8e-38 164.1 300 37.3
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.4e-38 163.7 284 35.6
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 5.3e-38 162.5 284 35.2
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 5.3e-38 162.5 284 35.2
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 1.5e-37 161.0 287 32.8
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.5e-37 161.0 287 34.8
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 3.5e-37 159.8 274 33.2
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 4.5e-37 159.5 300 35.0
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 5.9e-37 159.1 288 36.8
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.7e-37 158.7 284 34.9
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.7e-37 158.7 284 34.9
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 1.7e-36 157.5 290 34.5
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 3.8e-36 156.4 308 32.8
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 3.8e-36 156.4 285 34.0
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 8.5e-36 155.2 229 38.0
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 8.5e-36 155.2 239 38.1
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.5e-35 154.5 239 37.7
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.9e-35 154.1 318 32.1
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 1.9e-35 154.1 291 35.7
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.5e-35 153.7 287 36.2
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.5e-35 153.7 312 33.3
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 4.2e-35 152.9 224 36.2
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 4.2e-35 152.9 286 35.0
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.2e-35 152.1 228 38.6
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 9.4e-35 151.8 286 32.2
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.2e-34 151.4 291 30.6
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.6e-34 151.0 286 35.7
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 1.6e-34 151.0 224 39.3
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 2.1e-34 150.6 323 32.2
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 2.1e-34 150.6 350 30.9
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 3.6e-34 149.8 277 32.9
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 3.6e-34 149.8 291 30.2
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 6.1e-34 149.1 332 29.5
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.4e-33 147.9 312 30.8
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 1.8e-33 147.5 237 38.4
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 2.3e-33 147.1 299 31.1
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 3.0e-33 146.7 278 31.3
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 8.8e-33 145.2 295 33.2
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.1e-32 144.8 227 37.4
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 1.5e-32 144.4 237 36.3
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 2.0e-32 144.1 223 36.8
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 2.6e-32 143.7 287 32.8
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.3e-31 141.4 226 37.2
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.3e-31 141.4 284 31.7
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 1.3e-31 141.4 274 32.5
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.7e-31 141.0 241 35.7
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 1.7e-31 141.0 235 36.2
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.7e-31 141.0 276 31.9
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 3.7e-31 139.8 297 32.3
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 4.8e-31 139.4 297 33.0
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 6.3e-31 139.0 296 32.1
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 6.3e-31 139.0 296 32.1
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 8.2e-31 138.7 238 37.8
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.1e-30 138.3 296 31.1
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.1e-30 138.3 235 35.3
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.4e-30 137.9 277 35.4
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 1.4e-30 137.9 276 30.8
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.8e-30 137.5 285 30.9
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 2.4e-30 137.1 300 33.0
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 3.1e-30 136.7 295 31.9
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 3.1e-30 136.7 302 32.5
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.0e-29 134.0 237 35.0
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.6e-29 133.7 293 32.1
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 3.5e-29 133.3 233 37.3
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 7.7e-29 132.1 321 29.9
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 7.7e-29 132.1 281 31.3
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 7.7e-29 132.1 235 34.0
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.0e-28 131.7 298 30.5
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.7e-28 131.0 237 34.2
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 8.0e-26 122.1 224 33.0
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 2.3e-25 120.6 311 29.3
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 8.8e-25 118.6 259 34.0
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 8.8e-25 118.6 193 33.7
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.2e-24 118.2 242 33.1
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 2.0e-24 117.5 193 32.6
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 3.4e-24 116.7 319 29.2
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 3.4e-24 116.7 189 33.9
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.3e-23 114.8 258 30.2
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 1.8e-22 110.9 192 33.9
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 2.4e-22 110.5 232 30.2
CDE05G3494 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.4e-22 110.5 54 96.3
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 2.7e-21 107.1 224 30.4
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 4.5e-21 106.3 191 32.5
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.7e-20 104.4 191 31.4
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 5.0e-20 102.8 194 34.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 2.5e-19 100.5 191 31.4
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 2.1e-18 97.4 191 30.4
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.1e-18 97.4 190 29.5
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 2.7e-18 97.1 201 30.3
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.8e-17 94.4 201 29.9
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 6.8e-17 92.4 238 27.7
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 9.1e-14 82.0 70 54.3
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 5.9e-13 79.3 197 28.9
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 1.5e-11 74.7 91 38.5
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.3e-11 73.6 205 26.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 8.9e-09 65.5 49 51.0
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 8.9e-09 65.5 71 42.3
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 8.9e-09 65.5 71 42.3
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 9.2e-06 55.5 93 37.6


User provided reference genes

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