Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0151 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 5.7e-104 380.9 194 100.0
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 5.9e-61 238.0 167 77.8
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.6e-16 89.7 179 39.7
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 1.3e-15 87.4 181 37.0
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.7e-15 87.0 175 40.0
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 2.7e-13 79.7 179 36.9
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 7.8e-13 78.2 170 37.1
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 7.8e-13 78.2 164 39.0
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 2.3e-12 76.6 165 38.2
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 3.0e-12 76.3 186 33.9
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 3.0e-12 76.3 165 38.8
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 5.1e-12 75.5 193 33.7
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 5.1e-12 75.5 193 34.2
CDE06G1782 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 1.1e-11 74.3 180 36.1
FAN28G1045 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.5e-11 73.9 192 35.9
PSO541G5621 Papaver somniferum HOM05D001749 ORTHO05D001632 3.3e-11 72.8 199 35.7
Thecc.01G031200 Theobroma cacao HOM05D001749 ORTHO05D001632 3.3e-11 72.8 181 34.3
Manes.02G096700 Manihot esculenta HOM05D001749 ORTHO05D001632 4.3e-11 72.4 203 32.5
Gohir.A11G182600 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.6e-11 72.0 178 33.7
ECA232G4251 Erigeron canadensis HOM05D001749 ORTHO05D001632 7.3e-11 71.6 187 30.5
FAN26G1634 Fragaria x ananassa HOM05D001749 ORTHO05D001632 9.6e-11 71.2 194 34.0
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 9.6e-11 71.2 164 33.5
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 1.3e-10 70.9 164 36.6
Glyma.02G054400 Glycine max HOM05D001749 ORTHO05D001632 1.3e-10 70.9 176 35.2
Duzib147G1275 Durio zibethinus HOM05D001749 ORTHO05D001632 2.1e-10 70.1 185 33.0
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 2.1e-10 70.1 184 32.6
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 2.8e-10 69.7 163 35.0
THA.LOC104818171 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.6e-10 69.3 184 31.5
CDE02G3540 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 4.8e-10 68.9 174 35.1
FvH4_1g12780 Fragaria vesca HOM05D001749 ORTHO05D001632 4.8e-10 68.9 195 31.8
Gohir.D11G189200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.8e-10 68.9 176 31.8
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 4.8e-10 68.9 184 33.7
PSO832G2070 Papaver somniferum HOM05D001749 ORTHO05D001632 6.2e-10 68.6 193 32.1
RcHm_v2.0_Chr2g0100901 Rosa chinensis HOM05D001749 ORTHO05D001632 6.2e-10 68.6 200 33.0
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 6.2e-10 68.6 158 31.0
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 6.2e-10 68.6 170 35.3
Gorai.007G201500 Gossypium raimondii HOM05D001749 ORTHO05D001632 8.1e-10 68.2 180 31.7
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 8.1e-10 68.2 169 36.7
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 1.1e-09 67.8 164 34.8
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 1.8e-09 67.0 162 34.0
FAN19G1879 Fragaria x ananassa HOM05D001749 ORTHO05D001632 2.4e-09 66.6 195 31.3
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.4e-09 66.6 184 33.2
Aa31LG1G14960 Aethionema arabicum HOM05D001749 ORTHO05D001632 3.1e-09 66.2 185 30.3
arahy.Tifrunner.gnm1.ann1.39NQDQ Arachis hypogaea HOM05D001749 ORTHO05D001632 4.0e-09 65.9 222 28.4
Sc15g0007080 Simmondsia chinensis HOM05D001749 ORTHO05D001632 4.0e-09 65.9 179 34.1
VMungo1309G2481 Vigna mungo HOM05D001749 ORTHO05D001632 4.0e-09 65.9 176 33.5
AUR62014496 Chenopodium quinoa HOM05D001749 ORTHO05D001632 5.3e-09 65.5 168 33.9
PGR119G0350 Punica granatum HOM05D001749 ORTHO05D001632 5.3e-09 65.5 194 33.0
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 5.3e-09 65.5 168 34.5
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 9.0e-09 64.7 163 29.4
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 9.0e-09 64.7 164 33.5
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 9.0e-09 64.7 167 34.1
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 9.0e-09 64.7 167 34.1
AUR62038042 Chenopodium quinoa HOM05D001749 ORTHO05D001632 1.2e-08 64.3 171 31.0
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.2e-08 64.3 167 34.1
PSO675G0347 Papaver somniferum HOM05D001749 ORTHO05D001632 1.2e-08 64.3 202 34.2
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 1.2e-08 64.3 169 32.0
Sc03g0003140 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.2e-08 64.3 183 32.8
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 1.5e-08 63.9 165 30.9
Ah.05g177040 Amaranthus hybridus HOM05D001749 ORTHO05D001632 2.0e-08 63.5 172 32.6
Ca_20902_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 2.0e-08 63.5 168 33.3
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 2.0e-08 63.5 166 33.7
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 2.6e-08 63.2 168 33.9
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 3.4e-08 62.8 166 33.1
THA.LOC104819200 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.4e-08 62.8 188 28.7
arahy.Tifrunner.gnm1.ann1.HXWY1L Arachis hypogaea HOM05D001749 ORTHO05D001632 4.5e-08 62.4 228 27.2
arahy.Tifrunner.gnm1.ann1.RJ9RH5 Arachis hypogaea HOM05D001749 ORTHO05D001632 4.5e-08 62.4 180 33.9
Carub.0008s2808 Capsella rubella HOM05D001749 ORTHO05D001632 4.5e-08 62.4 182 29.1
CiPaw.01G045700 Carya illinoinensis HOM05D001749 ORTHO05D001632 4.5e-08 62.4 182 29.1
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.5e-08 62.4 187 30.5
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 5.8e-08 62.0 171 31.6
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 5.8e-08 62.0 171 31.6
COL.COLO4_22034 Corchorus olitorius HOM05D001749 ORTHO05D001632 7.6e-08 61.6 175 29.7
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 9.9e-08 61.2 161 34.8
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 9.9e-08 61.2 165 33.9
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 9.9e-08 61.2 162 29.6
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 1.3e-07 60.8 168 33.3
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.3e-07 60.8 167 34.1
Medtr4g070640 Medicago truncatula HOM05D001749 ORTHO05D001632 1.3e-07 60.8 155 34.8
QL06p047145 Quercus lobata HOM05D001749 ORTHO05D001632 1.3e-07 60.8 175 28.6
BcaNung05716 Brassica carinata HOM05D001749 ORTHO05D001632 2.2e-07 60.1 182 27.5
EL10As8g23912 Beta vulgaris HOM05D001749 ORTHO05D001632 2.9e-07 59.7 190 33.2
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 3.8e-07 59.3 161 33.5
Glyma.06G010900 Glycine max HOM05D001749 ORTHO05D001632 3.8e-07 59.3 191 30.4
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 3.8e-07 59.3 165 32.7
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 3.8e-07 59.3 164 32.9
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 4.9e-07 58.9 168 31.0
Dinv13495 Davidia involucrata HOM05D001749 ORTHO05D001632 4.9e-07 58.9 181 29.8
Gohir.D02G217101 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.9e-07 58.9 161 33.5
Lj1g0015330 Lotus japonicus HOM05D001749 ORTHO05D001632 4.9e-07 58.9 185 30.3
MD02G1143400 Malus domestica HOM05D001749 ORTHO05D001632 4.9e-07 58.9 188 30.9
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 4.9e-07 58.9 166 33.1
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 6.4e-07 58.5 168 32.1
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 6.4e-07 58.5 177 33.3
THA.LOC104826664 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 6.4e-07 58.5 201 30.8
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 6.4e-07 58.5 163 30.1
Aqoxy5G01581 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 8.4e-07 58.2 196 33.2
AT5G66440 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 8.4e-07 58.2 193 28.0
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 8.4e-07 58.2 161 31.1
ClCG07G008620 Citrullus lanatus HOM05D001749 ORTHO05D001632 8.4e-07 58.2 174 28.7
Haze_15059 Corylus avellana HOM05D001749 ORTHO05D001632 8.4e-07 58.2 190 31.1
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 8.4e-07 58.2 164 32.3
FAN23G0952 Fragaria x ananassa HOM05D001749 ORTHO05D001632 8.4e-07 58.2 181 33.7
Glyma.04G011000 Glycine max HOM05D001749 ORTHO05D001632 8.4e-07 58.2 167 34.7
Phvul.009G022300 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 8.4e-07 58.2 170 31.2
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 8.4e-07 58.2 164 33.5
CANSAT01G2116 Cannabis sativa HOM05D001749 ORTHO05D001632 1.1e-06 57.8 173 30.6
Gorai.011G100900 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.1e-06 57.8 175 29.7
Phvul.009G022400 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 1.1e-06 57.8 170 31.2
Sp7g32350 Schrenkiella parvula HOM05D001749 ORTHO05D001632 1.1e-06 57.8 170 28.8
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 1.4e-06 57.4 188 31.9
Duzib187G2007 Durio zibethinus HOM05D001749 ORTHO05D001632 1.4e-06 57.4 182 32.4
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 1.4e-06 57.4 208 26.9
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.4e-06 57.4 161 33.5
AT4G34560 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 1.9e-06 57.0 170 27.6
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 1.9e-06 57.0 179 29.6
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.9e-06 57.0 177 30.5
Ca_22298_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.9e-06 57.0 183 26.2
Ca_22328_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.9e-06 57.0 183 26.2
Cc07_g09890 Coffea canephora HOM05D001749 ORTHO05D001632 1.9e-06 57.0 192 27.1
Sc02g0005800 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.9e-06 57.0 183 31.1
THA.LOC104824815 Tarenaya hassleriana HOM05D008867 ORTHO05D001632 1.9e-06 57.0 178 32.0
VMungo0251G1101 Vigna mungo HOM05D001749 ORTHO05D001632 1.9e-06 57.0 169 29.6
ATR0568G223 Amborella trichopoda HOM05D001749 ORTHO05D001632 2.4e-06 56.6 193 30.1
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 2.4e-06 56.6 198 28.3
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 2.4e-06 56.6 163 32.5
Glyma.16G134800 Glycine max HOM05D001749 ORTHO05D001632 2.4e-06 56.6 179 32.4
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.4e-06 56.6 168 29.2
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 3.2e-06 56.2 167 31.1
CiPaw.02G020500 Carya illinoinensis HOM05D001749 ORTHO05D001632 3.2e-06 56.2 185 30.3
CsaV3_4G005530 Cucumis sativus L. HOM05D001749 ORTHO05D001632 3.2e-06 56.2 186 32.8
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.2e-06 56.2 172 31.4
MELO3C016396.2 Cucumis melo HOM05D001749 ORTHO05D001632 4.2e-06 55.8 177 31.1
Potri.007G021500 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.2e-06 55.8 208 28.4
Rhsim05G0072700 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.2e-06 55.8 168 32.1
Sed0004351 Sechium edule HOM05D001749 ORTHO05D001632 4.2e-06 55.8 169 29.6
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 5.4e-06 55.5 161 31.1
AUR62004089 Chenopodium quinoa HOM05D001749 ORTHO05D001632 7.1e-06 55.1 197 28.9
Gohir.A10G096200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.1e-06 55.1 177 30.5
Gohir.D10G091900 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.1e-06 55.1 175 29.1
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.1e-06 55.1 165 29.1
Sabra05G0099000 Salix brachista HOM05D001749 ORTHO05D001632 7.1e-06 55.1 209 30.1
PGSC0003DMG400003523 Solanum tuberosum HOM05D001749 ORTHO05D001632 7.1e-06 55.1 188 27.1
Medtr3g117050 Medicago truncatula HOM05D001749 ORTHO05D001632 9.3e-06 54.7 191 30.9


User provided reference genes

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